Contarinia nasturtii (swede midge): 116342874
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Entry
116342874 CDS
T08003
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116342874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116342874
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116342874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D3
Nrap_D2
Nrap_D5
Nrap
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
116342874
NCBI-ProteinID:
XP_031626524
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MLNPNEKSTKKRKNVQENDSQTSVDPAAKKLKLKKDLHKVAKVEEINQLKATEKLYHSNF
FHLQTEELLKETKLTEKRAAFAETFFKGLVEFLKSLPTQENETPVHELKWLKKNKIVPPI
SEEIPFDSAPIKFRFVTPSSIFPVGSFRAQTVIKVQTTLDICIEIPADFFPKGNHLNGIY
HRKKALYLSYLALKVKSWDQVTNCKFTFVNGNPFQPVLVLEPTGKYGKNICFHLRATCGE
ESFKIERLAPEKSNVKQLTELKCSKKKTSTDVIKNTEHSATPYYNSTILGDLNTKFNDTY
LCNTLGTNPHVRDAIILLKIWLKQREYNVGEGGFNGFILSMFIAYLIQKNLITPSMNSYQ
IIRQAWIHLANTSWDELNKSISIYESKFRTTQPEPEIFHQYFDVVFIDSTGYYNICANLS
LDIYRRVRHESSLALKLLNNEHVNSFRFLFATKMPLYTQVDHIVRFDVTNLLKKSEQSET
LFSVCGFWHAYAEKMVLGVLRKGLDKRVHAILPISEIHEGNSQTWNINEHHTPNERVLKI
GLVLNQEYALDILDKGPQSNLPEAEEYRQFWGSKSELRRFQDGSISEACVWGSLTSSLAE
KRLVCKRIVEHLLEHHFNIDNDKIQYTAAQMDSAYAINECFKEFLDGDNNAENMAVQVIK
TFDELGKNLRSLDELPLVITSVLGQSPVFRYCELLPVIANARLFSKDDKQTFNASIINEG
VIQFETSGKWPSELGALERVKAAFCLQIARGLRKKFHLRTKVNVDSVDVIKDGYMFRYKI
AVPREIALHMKEVTTKGITKYRASVKSTKMERELMLIPKITVSLHTLYHQHLSFGPTVLL
AKRWLRSQLIDPFLFDDICIELLVAHQYYNAIASEAPVQPQTAFIRFLHMLSNTNWNTEL
ILLNFNDDLSREYTEKLEMEFVSTRNVFPPLCIITSCGEIDKHIVWSKKTPSVEILARIT
LLARHAIKLIQHSIFKDFTAEPLFTASIDGYNLLINLNKRHLRDNLVHEFSSNSNKPCRQ
RKPFIPLSDYNPVESYLNELRSGYSHVAMFFYNPCGGDRIAVLWKPSTFTKQEFKISAAV
GQVRADDDQLQFNHEQLKNDFLILGQGLVESITDFAN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatccaaatgaaaaatcaacaaaaaagcgtaaaaacgtgcaagaaaatgatagc
caaacatcggttgatccagccgcaaaaaagctgaagctaaagaaagacctacacaaagtg
gccaaagttgaagaaatcaatcagttaaaagccaccgaaaaattgtatcattcgaatttt
ttccacttgcaaaccgaagaattgttgaaagaaaccaaattaaccgaaaaacgagcggca
tttgctgaaacatttttcaaaggattagtcgaatttttaaaatcgctaccgacgcaagag
aacgaaacaccggttcacgaattgaaatggttgaagaaaaataaaattgtgccaccgatc
agcgaggagattccatttgattcagcaccaattaaattccgtttcgttacaccgtcttca
atttttccggttggatcgtttcgggcacaaacagttatcaaagtgcaaaccactttagat
atttgtattgagattccggccgattttttccccaaaggcaatcacttaaacggaatctac
catcgaaaaaaggcactctatttgagctatcttgcgttgaaagttaaatcttgggatcaa
gtgaccaattgtaaattcacttttgtaaatggaaatccattccaaccggttttagtgcta
gagccgactggaaaatatggaaaaaacatttgtttccatttgcgagccacttgcggcgaa
gaaagttttaaaatcgaacgcttggcaccggaaaaatcgaacgttaaacaattgaccgaa
ctgaaatgttcgaaaaagaagacatcgactgatgttattaaaaatacggaacattcagca
acgccctattataatagcactattttgggtgatttaaatacaaaatttaatgacacatat
ctatgcaatacgctcggcactaatccacacgtcagagatgccataattttgttgaaaatt
tggttgaagcaacgcgaatacaatgtgggagagggtggtttcaatggcttcattttgtca
atgtttatcgcatatttgatacaaaagaatctaatcacaccgtcaatgaatagctatcaa
attattcgccaggcttggattcatctagccaatacatcatgggatgaattaaacaagagc
atttcgatttatgagtcaaagttccgtacaacacaacccgaaccagagattttccatcag
tatttcgatgttgtatttatcgattcgactggttactataatatttgtgccaatctctcg
ttggacatatatcgtcgtgtacgtcatgaaagctcgctcgcattgaaattattaaacaac
gaacatgtaaatagttttcgatttttgtttgcaactaaaatgccgttgtacacccaggtt
gaccacatcgttcgatttgatgtgaccaacttgttgaagaagtcagaacaatctgaaaca
ttatttagtgtatgcggtttttggcatgcatatgcagaaaaaatggtattgggtgttcta
cggaaaggcttggataaacgtgttcatgcaattttaccaataagtgaaattcatgaaggc
aactcacaaacctggaatatcaacgaacatcacacaccaaacgaacgtgtactgaaaatt
ggactcgttctaaatcaagaatatgcacttgatattttggacaaaggaccacaatcaaat
ctacctgaagcagaagaataccgacaattctggggctcgaagtcggaattgaggcgattc
caagatggatcaatttcggaggcttgtgtttggggttcattgacatcatcattagccgaa
aagagattagtttgcaaacgaattgtcgaacatttattggaacatcattttaatatcgat
aacgataaaattcagtacacagctgcacaaatggattcagcgtacgctattaatgaatgt
tttaaggaatttttagatggcgacaataatgcggaaaatatggccgttcaagttattaag
acattcgatgaactcggcaaaaatttgagatcgctcgatgaattgccactagttattaca
tctgtgttgggtcaatcgccagtgtttcgctattgcgaattacttccggtcattgcaaat
gcaagactgttttcaaaagacgataagcaaacattcaatgcgtccataataaacgagggt
gttattcaattcgaaacatctggaaagtggccaagtgaattgggagcacttgaacgggtc
aaggctgcgttttgtcttcaaattgcgcgcggattgcggaaaaaatttcaccttcgtacc
aaggtcaatgtggattccgtcgacgtgattaaagacggttacatgtttcgatacaagata
gctgttccacgtgagattgcattgcatatgaaagaagtgactacaaaaggcattaccaaa
tacagagcttccgtaaaaagtacgaaaatggaacgtgaattgatgctaattccgaaaata
acggtctctttgcacacactttatcatcagcacttatcatttggaccaacggtacttttg
gcaaaacgatggctacgctcacaattgatcgatccatttttgttcgatgacatttgtatt
gaactccttgtcgctcatcaatactataatgcaattgcatcggaggcaccagtacaacca
cagactgcattcattcgatttttgcatatgttgtccaatacgaattggaatacagagttg
attctattgaatttcaatgatgacctaagtcgtgaatatacggaaaaattggaaatggaa
ttcgtttcaacgcgaaatgtattcccaccgttgtgcattattacgtcatgtggtgagatt
gataaacacatcgtgtggtcaaagaaaacaccgagtgttgaaatacttgctcgaattact
ctattggctcgccatgccatcaaactcattcagcacagtatttttaaggatttcactgct
gagccactattcacggcatcgattgacggatataacctattgataaatctcaacaaaaga
cacctcagagacaatcttgttcatgaattttcaagcaatagcaacaaaccgtgccgacaa
cgcaaaccttttataccattgtccgattataatccagtggaatcatatctaaatgaactg
cgatcgggttacagtcatgtagccatgttcttttataatccatgcggtggggatcgaata
gccgtcttatggaaaccaagcacatttacgaaacaagaatttaagattagtgctgctgtt
ggacaagtaagagccgatgacgatcaattgcaattcaatcatgaacaattgaaaaatgac
tttttgatcttgggacaaggtcttgtagaaagcataacagattttgcgaattga
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integrated database retrieval system