Contarinia nasturtii (swede midge): 116342937
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Entry
116342937 CDS
T08003
Name
(RefSeq) WD repeat-containing protein 46
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116342937
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116342937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BING4CT
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
116342937
NCBI-ProteinID:
XP_031626620
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MNEEIEKLKTPVKKPVRYFSDVRKVESEDVEQIQVNNKKKATSFKGEVIQVREKEKFYAK
SKWNNKRPENVKQYGQNKRKKSLVKIEVDPYAKDRHSRGGKSSGEGIKTAHFKEKFQRKE
VYYDFANEQAARAEILLNEEEGFIEPEDGVTTAEYTQQEIVANVDITAASKHFNLSLDFG
PYRMRYTKNGRHLLLGGRKGHVAAFDWITKKMHCEFNVMEEITDVTWLHVETMFAVAQKN
WVHFYDNQGIEVHCVKAMNRIRCLDFLPYHFLIVSGSDTGFLSWLDVSTGTLVANYPSKL
GPIRMMAHNPYNGVTCIGDSKGVVSMWSPTVAKEPLAKMLCHSTPMTALAIDPKGTFMAT
SGLDRHVKIWDVRTLKGPLSDFVLRNPANQLAISQRGLIAFGMGNQCEIYRKPNAVSIKA
PYMRHRCPDTIANMQFVPFEDVLGVGTGKGFTSLLVPGSGEPNFDALEANPYQTKSQRKE
SEVHMLLDKIPAELIKLDPNVISQVDVPTLNENIEAKKSLLYLKAPTVDFKQRNKMKGKG
GSVNAFKAKRIVRDQTKKQFIQSIKGVRQQLIDEHKVKTEDDNKSVGRNALDRFKAKKKK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagaaattgaaaaattaaaaacgccagtaaaaaaaccggtgcgatatttcagc
gatgtgagaaaagttgaaagtgaagatgttgaacaaatccaagtaaacaataaaaagaaa
gcgacttcgtttaaaggtgaagtaatacaggtacgagaaaaggaaaagttctatgcaaaa
tcaaaatggaacaataaacgtccggaaaatgtaaaacaatatggacaaaacaagcgaaag
aaaagtttggttaaaattgaagttgatccatatgcaaaagaccggcactcacgtggcggt
aaatcgagtggcgaaggaataaagacggcacatttcaaagaaaaatttcaacgcaaagag
gtttactatgattttgccaatgaacaagccgccagagctgaaatactgttgaacgaagaa
gaaggttttattgagccagaggatggagttaccacagccgaatatacacaacaagaaatt
gttgcaaatgttgatataacagcagcttcaaagcatttcaatttgagcttagatttcggt
ccgtatcgcatgcgttacacgaaaaatggtcgtcatctattgttgggcggtcgaaaaggt
cacgttgctgcatttgattggattacaaagaaaatgcactgtgagttcaatgttatggaa
gaaatcaccgatgtcacatggttacatgtggaaacaatgtttgccgtcgcacaaaagaat
tgggtgcatttttacgataatcaaggaattgaagtgcattgtgtgaaagcaatgaatcgt
attcgatgcttggattttctaccgtatcattttttgattgtaagcggtagtgatacggga
tttttgtcatggttggatgtatcaacgggtacattggttgcgaattatccatcgaaattg
ggtccgattcgaatgatggctcacaatccatacaatggtgttacgtgtattggagattca
aagggagtggtttcgatgtggtcaccaacggttgccaaagaaccactggcaaagatgttg
tgccattcaacaccaatgaccgcactggctatcgatccgaaaggaacatttatggcaaca
agcggtttggatagacatgtcaaaatctgggatgttcgtacgctcaaagggccactttca
gattttgttctacgaaatccagcaaatcaactggcaatttcacaacgtggccttattgca
ttcggcatgggtaatcaatgtgaaatttatcgtaaaccaaatgcagtttcgattaaagca
ccatatatgcgacatcgctgtccagacaccatcgcaaatatgcaattcgttccattcgaa
gatgttcttggtgtaggaactggtaaaggtttcacatcgttgcttgtgccaggttccggc
gaacccaatttcgatgcgctcgaagccaatccatatcaaactaaatcacaacgtaaagag
agcgaagtacatatgctgttggataagattccggctgaattgattaaattggatccaaat
gtcatttcacaagtcgatgtgccaacgctcaacgaaaacattgaagctaagaaatcatta
ttgtatctcaaagcgccaacggtagatttcaagcaacgcaataagatgaaaggaaaaggt
ggttcagtgaatgcgtttaaagcgaagagaattgttcgtgaccaaacgaaaaaacaattc
atacaaagtatcaaaggggttcggcagcaactcatcgacgaacacaaagtcaaaacagaa
gacgacaacaagagtgtcggtcgtaacgcactcgatagatttaaggcaaaaaagaaaaaa
taa
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