Contarinia nasturtii (swede midge): 116342941
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Entry
116342941 CDS
T08003
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04080
Neuroactive ligand-receptor interaction
cns04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116342941
04082 Neuroactive ligand signaling
116342941
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cns04040
]
116342941
Ion channels [BR:
cns04040
]
Ligand-gated channels
GABA-A
116342941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116342941
NCBI-ProteinID:
XP_031626628
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MDLLPKSLILWLTITIAIFLPSFTSRQQNTVDAASAGGSMFGDVNISEILDSFSHSYDKR
VRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDMYFRQFWTDPRLAFQKKTGVETLSVG
SDFIKNIWVPDTFFVNEKQSYFHFATTSNEFIRVHHSGSITRSIRLTITASCPMNLEYFP
MDRQLCQIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTTGN
YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTL
MSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAQ
EKKLQVDGGQQPAMMSAGPDHSHSHSSHGHSHSHQHGPKQSAMQQQIPGNRPSGFANMQQ
GSRGCSLVGPLFQEVRFKVHDPKVHSKGGTLENTINGGRGRSNADSGPDEESGGDMRPPP
PPHLIHPGKDINKLLGITPSDIDKYSRIVFPVCFVCFNLMYWIIYLHVSDVVADDLVLLK
EDK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggatctactgccgaaaagtttaatactatggcttacaatcaccattgccatattccta
ccatcgttcacatcaagacaacagaataccgtagatgcagcttcggcaggtggcagcatg
tttggcgacgtcaacatatcggaaatcttggattcatttagtcatagttacgataagaga
gtaagaccaaattacggaggacccccagttgaagttggcgtaacgatgtacgtgctgtcg
atcagttcgctgtctgaagtgaaaatggattttacgctggatatgtattttcgtcagttt
tggactgatccacggttggcatttcaaaagaaaaccggcgtcgaaacgttgtcagttgga
tccgattttatcaaaaatatctgggtacctgatacattcttcgtgaacgagaaacaatca
tacttccactttgcgacgacaagtaatgaatttatacgtgttcaccattcaggttccata
acaagaagtatacggttaacaattacggcatcgtgtccaatgaatctagaatattttcca
atggatcgacagctatgccaaattgaaattgagagcttcggatacacgatgcgagacatt
cgatacaaatggaacgaagggccgaattcagttggtgtttcgtcagaagtgtcgttgcca
caatttaaggttttaggacatcgtcaacgagctatggaaatcagtcttacaacaggaaac
tactcacgattagcatgtgaaatccagttcgtgcgttcaatgggatactatcttattcaa
atttatatcccatctggattaattgtaattatatcgtgggtatccttctggttaaataga
aatgcaacaccagctcgtgttgcccttggcgtcaccactgtgttgactatgaccacactt
atgtcatcgactaatgcagcattaccaaaaatctcgtacgttaaatcaatcgacgtttat
ctgggcacatgtttcgtcatggtttttgccagtctattggaatatgccacggtcggctat
atggcgaagcgaattcagatgcgtaagcaacgttttatggcaatccaaaaaattgcccag
gagaagaagttacaagtagatggtggccaacaaccggcgatgatgagcgctggcccagat
cacagccacagtcacagtagtcacggacacagtcacagtcatcagcacggaccaaaacaa
tcagcaatgcagcaacaaataccaggaaatcgaccatccggttttgcaaatatgcagcag
ggctcgcgaggctgttcattagttggcccactgtttcaagaagttcgatttaaggtacat
gatccaaaagttcattccaagggcggcacactagaaaatacaataaatgggggtcgtggg
cgctcaaacgccgacagcggtccagatgaagagtcgggtggtgatatgcggccaccgcca
ccaccacatttaattcatccgggcaaagatataaataaattattgggtatcacaccatcc
gatatcgataaatattctcgaatagtgtttcccgtttgtttcgtatgcttcaatttaatg
tattggattatctacctacatgtgagcgacgtagtagcagatgatttggttctgttgaag
gaggataagtaa
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