Contarinia nasturtii (swede midge): 116343014
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Entry
116343014 CDS
T08003
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04137
Mitophagy - animal
cns04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116343014
04137 Mitophagy - animal
116343014
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cns01002
]
116343014
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116343014
04121 Ubiquitin system [BR:
cns04121
]
116343014
Enzymes [BR:
cns01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116343014
Peptidases and inhibitors [BR:
cns01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116343014
Membrane trafficking [BR:
cns04131
]
Endosome - Lysosome transport
Others
Others
116343014
Ubiquitin system [BR:
cns04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116343014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP8_dimer
UCH_1
Rhodanese
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
116343014
NCBI-ProteinID:
XP_031626737
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MMNRRIPPIDLYVADGVDQLNELAELSSVIKSKPINLLFNSAAKVLNEAQKLYSSGDDEK
AYVMYMKYFTLIEIIRKKTDLSKHKNEKRQYLGTKQEIDSHMDLLEKLKRNLVERYTERR
EKFVAKQKQAELNKENIKTNAVVPKPVSKFILITDLFKLMKETNQKILLIDCRSINEFEA
SKIRYDNLINIPGEAILKGYTANTMLKKIAPQYTKLFENRASMDLVVLIDDDTSESQSNL
SKPIWILRTILLEWDPDTHYKSLLLLHGGYNDFVYYYPHMTTNPKYSPKTNVETVELGDI
EYPSLSEIKMKPKPDENSFSSRIPNIDRSSKPAFGQKANEQQRPNNLISIKEQEIIFDQI
LQKEKEVLKIGDELYNVVNVPITSNDIDPSDWFNKQTELEYKMVQKENELNDTITGLSAT
TIPDFEGQLETLQINSNNPEESETLARINAKKNEHSENTRKLENISKKIESKISETREKQ
KRHLQSQLDDEELIRPKQPAFDRTIKPSYDQPTKFPQILRDFSPIMGSYGDVGATGLKNL
GNTCYMNSIIQCLLNIEGLCGYFQKDGYLRHINRKSKTHGQITEELAQLCKEVWSGKYKS
VAPRDFRSVVGQENKMFASYEQQDSHEFLVILLDILHSEMQFPIEDTILSEKSPKAEIAW
REFSKNMQSIIQRLFFGQIRSTLKCRTCGFESATYEGFSHLSLELPQDNRQCELYDCLDS
YFNGENIEGWTCPQCKQNRGAIKKLDISKLPPVLVIHLKRFHASLDTANTYYKKQNFVHF
PINDFRITDYITPSLQKQNRSLDQYNLIAVSNHYGTMNRGHYTAFCRNTNSKVWYKYDDC
YVTQIGSNDVNSSAGYILFYSQL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcgacgaataccgccaattgatttatatgtcgcagatggtgtggatcaatta
aatgagctcgcagagttgagttcagtgatcaaatcgaaaccaattaatttgctcttcaac
tctgccgcaaaagttttgaatgaagctcaaaagttatacagttcgggtgatgatgaaaaa
gcatacgttatgtacatgaaatactttacgttaatcgagatcattcgaaagaagaccgac
ttgagcaaacataaaaatgaaaaacgtcaatatttgggaacgaaacaagaaattgacagt
catatggatttgttggaaaaactaaagcgtaatcttgtagaacgatataccgagagacgg
gaaaaatttgtagctaaacaaaagcaagcagagttgaataaggaaaatatcaaaacaaat
gcggttgtgcctaaaccagtttcgaaatttattttgattactgatctgtttaaattgatg
aaagaaactaatcaaaagatacttttgatagactgtcgatcgatcaatgaatttgaagcg
tcgaaaattagatatgacaatttgatcaatattccaggagaagcgattctaaaaggttac
actgctaacacgatgttgaaaaaaattgcgccgcaatacacaaagctatttgaaaatcgc
gcttcaatggatttggtcgttctaattgatgatgatacgagtgaaagtcaaagtaatcta
tcaaaaccgatttggattctgcgaaccattttactggagtgggatccagatacgcattat
aaaagtttgcttttactccatggaggttacaacgactttgtatattactatccacatatg
acgacaaatccaaagtattcgccaaaaacaaacgtggaaaccgttgaattgggtgacatt
gagtatccgtcattgagtgagataaaaatgaaaccaaaaccagacgaaaattcattttcg
tctcgtataccgaatattgatcggagtagtaagccagcgtttgggcaaaaagcgaatgaa
caacaaaggccaaacaatctcatttcgatcaaagagcaagaaataatcttcgatcaaatt
cttcaaaaagaaaaggaggtcttgaaaattggcgatgaattatacaatgttgtaaatgta
ccgatcacatcaaatgacatagatccaagtgattggttcaataagcaaaccgaacttgag
tacaaaatggttcaaaaagagaatgaattgaacgatacaataactggactaagtgcaacg
accataccagattttgaaggtcaactggaaacacttcaaatcaattcgaataatccagaa
gagtctgaaactctcgcccgaatcaatgccaaaaagaatgaacattccgaaaatacaagg
aaattagaaaacatcagtaaaaaaatcgaatcaaaaatatcagagaccagagagaaacaa
aaaagacatttgcagtcacaactggatgatgaagaattaattcgtccaaagcaaccggcg
tttgatcgaacaataaagccatcgtatgaccaaccgactaaatttccgcaaatactccgt
gatttcagtccaattatgggttcatacggtgatgtgggagcaactggactaaaaaatcta
ggaaacacttgctatatgaacagtattattcagtgtctattgaatatcgaaggattatgt
ggatattttcaaaaagacggatatttaaggcatataaatcgaaagagtaaaactcatgga
caaataacggaagaattggcccaactgtgtaaagaagtgtggagtggaaaatataaaagt
gtggcacctcgcgattttcgcagtgttgttggacaggaaaataaaatgtttgccagctac
gaacaacaagattctcatgaatttctcgtcatattgctggacattttgcactcagaaatg
caatttccaattgaggatacaattttgagcgagaaatcgcctaaagcagagatagcatgg
cgagaattttcaaaaaacatgcaaagtataatccaaaggttgttctttggacagattcga
agcacgctaaagtgccgaacctgcggttttgaaagtgcaacttacgaaggattttcgcat
ttgagcctggagctaccgcaggataatcgacagtgtgaactgtacgactgtctcgattcg
tatttcaatggtgaaaatattgaaggttggacgtgtccccagtgcaaacaaaatcgaggg
gccattaaaaaattggacatttcgaaactgccaccggttttagtaatacatttgaaaaga
ttccatgcaagtttggatacagcaaatacgtattacaagaaacaaaactttgttcatttt
cccatcaacgattttcgaatcacggactatataacaccgtcgctgcaaaaacaaaaccga
tcattggaccagtataatcttattgctgtttcaaatcactacggtactatgaatcgtggt
cattacactgcattttgccgaaataccaactcaaaagtatggtataaatatgatgactgc
tatgttacgcaaattggaagcaacgatgttaattcaagtgctggatatattttattctat
tcacaactttga
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