Contarinia nasturtii (swede midge): 116343156
Help
Entry
116343156 CDS
T08003
Name
(RefSeq) mediator of DNA damage checkpoint protein 1-like
Organism
cns
Contarinia nasturtii (swede midge)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3915
Motif
Other DBs
NCBI-GeneID:
116343156
NCBI-ProteinID:
XP_031626930
LinkDB
All DBs
Position
Unknown
AA seq
1658 aa
AA seq
DB search
MPTKEEKHHSSSSSSSGSSGSSGTEKHKYCFLCNRNEFTLKSFDPTIEKDLRVIYNTEIK
FKENRKVCLQCLHVITLLKRSIRDEKKHNECCKDFFENVTYLHELRNKYQRYVNRLIDSR
NKDKDSPKKAADPQLNQSTPVTCSPVSSVPYTSADVTNNTTPKPSIKPSQQQQQQQVQQQ
QPIKLNDKPLKTNARSNGKSLADTNHCKGIERLQNVNHRLVKVKDKEKEKEKEKEKEKEK
EKDTVKNSTVGGTNSNTTVTTTATTSSTTNIVRSSSSRSRKNKYLASLTLKKDEVAVQDS
EKQQQKSPAKIDSMAKEKLIEEATKSNDVTSKSNKRRSQDRKTAAPELSSINAESEIKTK
LSNSSNSSIVNKASLITENTQNETLIVAKSVKSTKIPTNTKKARVQRSSSPIQQIAITPT
RQQRHCTFEQALTQVETTRSKTRTQTQKESVLTQTPDTLGPTTNSEVTTETENEMETNTV
AEDVSTNEPDSKLTDEKNVSPKAPPAKERFEFTTINGKQIEVPARVKFDMKMFNCYVKLS
RKQLYKRKFNGSPETLSSPPMKKRKRTSVRNYNESEVGPTEIEYNDELCNTQQPRSILQK
MNRSKTPVNGRKRVSFLGVPSSPPQSSPKPSKSSTTSESPSSKEKSEQPKQSHENDTTTI
MSVKEKEAKIETPKAHEKPKVAEKPKDDKTPKADVASKVDKTPEVDKISKIVESPKLKDI
KKVNTTVKQKETPKKAIQRPKRAKKCISNEILSSNNIVASVVQSPPTVSKSNDILITTDE
PCDNVAEEYEIETSNASCSEVQLNSTTDEAITSAITAETENVNSDVLETVNLVEENAIIT
ESDDNLQTTTTEPIKKKGKPYQSRIKPTNNINVEPVKVKEKQATKRQRKQVDKVKKTKYA
AIEAKDDIEIVNLDDIKRNIVIENVAESVPSPLKAAVDETDEDEVKLLIEADPLAIETDS
GCMSPVDTPISVPISIPISVMSTPVLTPTTTPTPTPTPTPTPTPTPTPSLRTQSPKPKHD
TTSEETSLKVMTPTATSIPRSHESPLKIKISNGKVVQSETTSPPQSSPSKRNSICTESSP
KAGARYRTKRVRKKKYLSADYVEHDVNESESEESPSQAPINERKKRKVTPLSKRLKEKEV
EVCSPPENPSTNVIEVEMSVDQTMLESQPLQPTQPLQPLQSLQPSQLSPQVGDRVYRAYV
RLDKINQQNNGSELAILEEEQQQHHHQQCGPMSQQHPAYSQSVNTQTEYILRPATQITQL
QSMSQANENLLHMNNMNGNNGCVTTLIHNVVGNMEIVENESEAHTMNVIQNYTNEGMNND
GMYEMQETTICENGESPTVPIVQTDNTGTIIGFESPATVDSTTSGYSSATATSSVYLVDT
QSLNHSIEVSNGFNSDFNIQQMQLETFPFVEIQQSDIIDILGKPNDCNDALNMENINLET
SANTTDTRTYYLTDEHAINTFNAINTINTVATVTQALPTLTTGNILGVFRTKASLKQIDP
PPTMHLLTDSHAHIQHHPHHHHHHHLHHLQHSHMLGHGSSAIPNELSGKMLRTDNPILNA
VISGNEESSMEMQDANDSFSMTVDSMVTSSDTVQATQRRPGLNVVFSTPSKRNNVYLSNE
NVSIDDFISDSQSLLNPDNFPTTTTNEESHLDFYTLGM
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgaaggaagaaaaacaccacagcagcagcagcagcagtagcggcagtagtggc
agcagcggcaccgaaaaacataaatattgttttctatgcaaccgcaatgaattcactctt
aaatcatttgacccgaccattgaaaaggatctgagagtcatttacaacacagaaataaaa
ttcaaggaaaaccgaaaagtatgcctacaatgcttgcatgtgattacattgctgaagcga
tcaatcagagacgagaaaaaacacaatgaatgttgcaaggatttctttgaaaatgtgacg
tacttacatgagctacgcaacaagtaccagcggtatgtcaaccgactgattgacagccga
aataaagataaagattcgccgaaaaaggcagcagatccacaattgaatcaatccaccccc
gtaacatgctcacctgtatcatcagtaccctatacctcagcggatgtcacaaacaataca
acgcccaaaccaagcatcaaaccgtcacagcagcagcagcagcagcaggtccaacaacaa
cagccgattaaacttaatgataaacctttaaaaacgaatgcacgctcaaatggaaaatct
ttggctgatacaaatcattgtaaaggcatcgaacgtttgcaaaatgtcaaccatagatta
gtcaaagtaaaagataaagaaaaagaaaaggaaaaagaaaaggaaaaggaaaaagaaaag
gaaaaagacaccgttaaaaacagcacagtgggtggtacaaacagcaacactaccgtcact
accaccgctaccaccagcagcacgactaatatcgtcagaagtagtagcagtagaagcaga
aaaaataaatatttagcaagtttgacattgaaaaaagatgaagttgccgttcaagacagc
gaaaaacaacaacaaaagtcacccgccaagatcgattcaatggctaaagaaaaactcatc
gaagaagcaacaaaatcaaacgatgtcacatcaaaaagcaataaacgtcgttcgcaggat
cgaaaaacggcagcgccggagcttagtagtattaacgcagaaagtgaaataaagacaaaa
ctatcaaatagttcaaatagtagtattgtaaataaggcttcgcttatcactgaaaacaca
caaaatgagacgctaattgttgccaaaagtgtgaagtccaccaagataccgacaaacacg
aagaaagcaagggtacaacggtcgagctcaccgatacaacaaatcgcaattacaccaaca
cgccaacagcgacactgcacatttgagcaagcgctcacacaagtcgaaacaacacgctca
aaaacacgaacacaaacacaaaaagaatccgtcttgacacaaacacctgatacattggga
ccaaccaccaattctgaagtaacaacagagaccgaaaatgaaatggaaacaaacaccgtg
gcagaagatgtatcgacaaatgaaccggatagtaaattgaccgacgagaaaaatgtgtcg
ccgaaagcgccaccggcaaaagaacgattcgaattcaccacaataaatggaaagcaaatt
gaagtgccagcacgagttaaatttgatatgaaaatgttcaattgttatgttaaactaagc
cgaaagcaattgtataagcgaaaatttaatggctcaccggaaactttatcatcacctcca
atgaaaaagcgaaagagaactagcgtacggaattataatgagtccgaagttggaccaact
gaaattgaatacaatgatgaattgtgcaatactcaacagccgcgaagtattttacaaaaa
atgaatcgctcaaaaacaccggtaaatggtcgaaaacgggtgtcattcctcggtgttcca
tcgtcaccaccacaatcatcacccaaaccatcgaaatcatcaaccacatccgaatcacca
tcatcaaaggaaaagtctgaacaaccgaagcaaagtcatgaaaatgatactactacgata
atgagcgttaaagagaaagaggctaaaattgaaacgccaaaggcacacgaaaagccaaaa
gtcgctgaaaaaccaaaagacgataaaacaccgaaagctgatgtagcttcgaaagtggat
aaaacaccagaagttgataaaatatcgaaaatcgtcgaaagcccgaaattgaaagacatt
aagaaagtgaatacaacggtgaaacaaaaagaaacgccgaaaaaggcaatacaacggcca
aagagggctaaaaagtgcatttcaaatgaaattttatccagcaataatatcgtagcaagc
gttgtgcaatcaccgccaacagtttccaaatcaaatgacattctcattacaacagacgaa
ccatgtgataatgtcgcggaagagtatgaaattgaaacgtcaaacgcatcatgttctgaa
gttcaattgaattccacaaccgatgaagcgattacaagtgcaatcaccgcggagacggaa
aatgtgaacagcgatgttttagaaacggttaatttagtcgaagaaaatgcaatcataacc
gagtctgacgataatttgcaaacgacgacaacggaaccaatcaagaaaaaggggaaacca
tatcagtcacgcatcaaaccgacaaataacattaacgttgagccggtaaaagtaaaggaa
aaacaagcgacaaaaagacagcgaaaacaagtagataaagttaagaaaacaaaatatgca
gcaattgaggctaaggatgacatcgaaattgtcaacctagacgatattaaacgaaatatt
gtcatagaaaatgttgcagaaagtgtacccagtccgcttaaagcagccgtcgatgaaacg
gacgaggatgaagtgaagcttttgattgaagccgatccgcttgcaattgaaacggacagt
ggttgtatgtcaccggtggatacaccaatatcggttcccatatcgattccaatatccgta
atgtccacaccagtattgacaccaacaacaacaccgacgccgacaccgacaccgacgcca
acaccgacgccaacaccgacgccgtcgctacgaacgcaaagtccgaagccaaaacatgat
acaacatcagaagaaacatcattaaaagtcatgacgcccacagccacatcgattccacga
agccatgaaagtccgttgaaaattaaaatttcaaacggtaaagttgtacagtcagaaaca
acaagcccaccgcaatcaagtccttcgaaaagaaattcaatttgtacagaaagctcaccg
aaagccggtgctcgttatcgcacgaaacgtgtacgcaagaagaagtatttatctgccgac
tatgtcgaacatgatgtaaatgaatccgaatcggaagaatcaccgtcacaagcaccgata
aacgaacgcaaaaaacgtaaagtgacaccattatcaaaacgattgaaggaaaaagaggtc
gaggtatgttcgccacccgaaaatccatccacaaatgtcatcgaagttgaaatgtctgtt
gatcagacaatgttggaatcacaaccattacaaccaacacaaccattacaaccattacaa
tcattacaaccatcacaactatcaccgcaagttggtgatcgtgtttaccgggcatatgtt
cgccttgataaaattaatcaacaaaacaatggctctgaattggccattttggaggaggag
cagcagcagcatcatcatcaacaatgtggaccaatgtctcagcaacatccggcctattca
caatcggtaaatacacaaactgaatatatactgcggccagcaacgcaaatcacccaattg
caatcaatgtcacaagccaatgaaaacttactgcacatgaacaatatgaatggaaataac
ggttgtgtcaccactctcatacacaatgtcgttggaaatatggaaattgttgaaaatgaa
agtgaagcgcatacgatgaacgtcattcagaattacacaaatgaaggcatgaataatgac
ggcatgtacgaaatgcaagagacgacaatttgtgaaaatggtgaatcacccactgtgcca
atagtgcaaaccgataatacgggcacaattattggttttgaatcgcccgcaacggttgat
tcaacaacatcgggctattcaagtgcaaccgctacatcttcagtttatttggttgataca
caatcgttgaatcattcgattgaggtgagcaatggttttaatagcgattttaatatacaa
caaatgcaattggaaacatttccatttgttgaaattcaacaatcggacattattgatatt
ttgggcaaaccaaatgattgcaatgatgcattgaacatggaaaatattaatttggaaacg
tcggccaatacaacagacacccgaacttattatttaaccgatgagcatgcaataaataca
tttaacgccataaatacgatcaatacggtagcaactgtgactcaagcgttgccaacatta
acaactggtaatattttaggtgtattccgaaccaaagccagtttgaaacaaatcgatccg
ccgccaacaatgcatttgctcaccgacagtcatgctcatattcagcaccatccacatcat
catcatcatcaccatcttcatcatcttcaacattcgcatatgcttggccacggctcatct
gccattccaaatgaattaagtggtaaaatgctacgaactgataatccaatattgaatgcc
gtgatcagtggcaacgaagagtcgtcgatggaaatgcaagatgcaaacgattcattttca
atgaccgtcgattcaatggtcaccagcagcgatacagtgcaagcaacacaacgacgtccc
ggactgaatgttgtgttctccacaccgtcaaagcgaaataatgtttatctcagcaatgaa
aatgtatcaatcgatgattttatcagtgacagccaatcattgttaaatcccgacaatttc
ccaacgaccaccacaaatgaagagtcccatctggatttctacacacttggcatgtaa
DBGET
integrated database retrieval system
