KEGG   Contarinia nasturtii (swede midge): 116343195
Entry
116343195         CDS       T08003                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
cns  Contarinia nasturtii (swede midge)
Pathway
cns03030  DNA replication
cns03410  Base excision repair
cns03420  Nucleotide excision repair
cns03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cns00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116343195
   03410 Base excision repair
    116343195
   03420 Nucleotide excision repair
    116343195
   03430 Mismatch repair
    116343195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cns03032]
    116343195
   03036 Chromosome and associated proteins [BR:cns03036]
    116343195
   03400 DNA repair and recombination proteins [BR:cns03400]
    116343195
DNA replication proteins [BR:cns03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    116343195
  DNA Replication Termination Factors
   ELG1-RFC complex
    116343195
Chromosome and associated proteins [BR:cns03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    116343195
DNA repair and recombination proteins [BR:cns03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     116343195
  Check point factors
   HRAD17(Rad24)-RFC complex
    116343195
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 Rep_fac_C AAA AAA_22 efThoc1 DUF7494 RsgA_GTPase ABC_tran
Other DBs
NCBI-GeneID: 116343195
NCBI-ProteinID: XP_031626989
LinkDB
Position
Unknown
AA seq 355 aa
MALWVDKYRPRVLDELDYHQDQAQQLKNLAKQSDFPHLMFFGPSGAGKKTRILCLLRELY
GEGVEHIKNETFQFTTASNRKMEILTIGSNYHLEINPSDAGIHDRIVVVELIKQIAQTRN
LNQSGQREFKVIVLSEVDSLTKDAQHALRRTMEKYMSTCRIVLCVNSTSRVIPAIRSRCL
GIRVSAPKIEEISDILVKICKKESLNIPRELAERMATQSNRNLRRAILLLEATRAQQYPF
TANQKIMELEWQIFLRETANQILSEQTPSKLEKVRERLYELLAQGIPADTIFKTLVENLV
KKCDMSLKAKTVEFACIYEHRMQQGSKHIFHLEAFVANFMAIYKKFMNEMMTDDF
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggcattgtgggttgataaatatcgtcctcgagtccttgacgaattggattatcatcaa
gatcaggcacaacaattgaaaaatttagcgaaacaaagtgattttccacatttaatgttc
tttggaccgagtggagcgggtaagaagacgcgtattttatgtttgttgcgagaattgtac
ggtgaaggtgttgagcacatcaaaaatgaaacgttccaattcacaacggcatcaaatcgt
aaaatggaaattctcaccattggcagcaactatcatttggaaataaatccatcggacgcc
ggtattcatgatcgcatcgttgttgttgagctcatcaaacaaattgctcaaacacggaat
ttaaatcaaagcggacagcgggaatttaaagtgattgtattgtctgaagtggattctttg
accaaagatgcacaacacgcattgcgtcgcaccatggagaaatacatgagcacatgtcgt
attgttttgtgcgtaaattcaacgtcacgcgtaattccggccattcgaagtcgttgcttg
ggcattcgtgtatccgcaccaaagattgaagagatttccgacattttggtgaaaatatgc
aagaaagaaagtttgaacattccgcgtgaattggccgagcgcatggcaacacaatcgaat
cgaaatcttcgccgtgccatcctattacttgaagcaacccgagctcaacagtatccattc
accgccaatcaaaagatcatggaacttgaatggcaaatcttcctgcgtgaaacggccaat
caaatactctccgaacaaactccgtccaaattagaaaaggttcgagaacgtttgtacgaa
ttgctggcacaaggtattccggccgacacaatattcaagacgttggtcgaaaatttggtg
aagaaatgtgatatgtcgttgaaagcaaagaccgtcgaatttgcctgcatttatgaacat
cgtatgcaacagggtagcaaacatattttccatctcgaagcatttgtcgccaatttcatg
gccatctacaaaaaattcatgaacgaaatgatgacagatgatttctaa

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