Contarinia nasturtii (swede midge): 116343222 Help Entry 116343222         CDS       T08003                                  Name (RefSeq) laminin subunit alpha-1   KO K05637   laminin, alpha 1/2 Organism cns  Contarinia nasturtii (swede midge) Pathway cns04512   ECM-receptor interaction cns04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cns00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116343222  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     116343222 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Laminin_EGF Laminin_G_2 Laminin_G_1 Laminin_N Laminin_B Laminin_G_3 Spectrin Motif Other DBs NCBI-GeneID:  116343222 NCBI-ProteinID:  XP_031627024 LinkDB All DBs Position Unknown AA seq 3338 aa AA seqDB search MLGVKENMYWQYFFVFVSLHAIVYCENLQSDDEFENDQVMLEGRKVNNHYQQSNVQQNYY RFLSDEPSNAESIPFDAVDRKYVRRTNFRRRKMGSSTNKKTIFLRGQRRRHNKNGFQAVS DMDYMPSDADNNKDNDEESTDVGLWPPVLNVAPRAILHANGTCGQYHREEFCHTIDAHPQ RQRKPKCSVCDSHDGDRRHPIEYVIDGSQKWWQSPTLNSGAENEYITITVDLKQNYQVIF VSFKAAVSPRPASWILERSFDGVEFFPWQYFGVNDDDCRKRYNLPGQNEPYQIDSDDQII CSTQFSKAVPLENGEIHVKLLEGRPGIKSKVTPTNLLDFTLARYLRLRFQGMHTTLQSPN SIQWLVDRDQLNKRSFYSLRYIKIGARLDCSGHALRAKQYNDDEITECDCAHNTCGINCE KCCPLYNQKPYKQGTATDSNKCEKCECYGHSSECYYNPEVDQRGLSINTDGVYSGGGVCL NCTDLTTGINCEKCINNYYRPYGVSPNVKQPCIPCECNPIGTIGTCAGIGGTCTCKPGFA GPKCDECLPGYSGINCTQCPCDTRGTMPGGVCETHCQCKLYAEGELCDRCTPGYFGLSQS NPEGCTKCYCSGVGNICESSNIVTNTYETLEDWKITDISRSYLLHPSKDNETGFLVFNMY EMYESIYWLAPDLYCGNKLQSYGSSFVFTISWIVVRGDTSGKPTFCPTMIIIGANGMKIA YGDTIFSETNSTMSIQLTEHEWYQIPQTMDNTGRLQQNEYRGDYVSRSQFLSVLSNIESV MLRGSFHTDQAESVLIRASLEFGKGSKNEVPSNLVEQCVCPQGYIGLSCETCDFGYVRAY ENTTSEHLGICLPCSCNGHAESCDLTSNKCSQCTHNTTGSRCESCAVGYYGNAKLGTPHD CKRCACPLINDENNFSPTCQFRDSSYEQQNEVISDYSLISYQNNDNYICTKCPEGYVGDH CESCADGYYGIPTKVSSKCLKCPCNGGPCDPITGKCITCQGNTEGWRCEQCKSGYFGNPA KGCELCRCQSDGSENTDCDRESGQCKCKANYDGYQCDGCAFGYANISLGCPSCSCNGSGA IENFCDTHTGQCPCKMGVEGLQCDECMDGFYGLSTDGCQECHCNPLGSVAQNCNKHNGQC FCRENVTGRTCDKCSEGFWNLESGKGCQSCACNAIGSVNFSCNAYTGQCVCKVGVGGPMC DSCLEGFYGLSATGCKHCDECSNSAYNCDPESGRCICPPHSKGIDCNQCMPNSYGWEHKK GCKLCECDHTGSIGQSCDVYTGQCMCREGFTGRECNRCSIGYFGYPNCERCGCNHDGSLT TNYSEPIPCNDEGQCSCKSLVTGKKCDQCIESTFGLSKYNADGCTKCFCFDRSKKCIQSD FSWGLIRANDARCLTVEYQNIEYVALQTQDNSTEISYETNLQILDGLSVIPGTSGNISMK SSRGFETPLYFEMSKQFLGDQLLSYGGLFKFNIEMMECKTELDQITLQHFPLIRMRSHNS LTLDYFGPESFHTSSNVTETIRMIEEHWRLHPSGEVASRGIFMTALQNITYILIRGASSV AFTSLTLSNVTLETAIFISGSKSNLAIGVEVCQCPEMYEGSSCQNPSDGYYRHKESHVET SHQHYENFVGKSVPCECHSRSNQCDKETGYCKMCVNNTGGAQCELCAEGYYGDPIVYGCQ SCPCPETHRNFAKGCTFYNGRVSCSCRSGYIGDLCDFCAPGFYGSPEQEGGGCIDCQCNE HGSVSIECDAFTGDCMCKDGIIGTKCDKCAQPTSILEPNGCQVCDNCTLILLENSNDLAY YIQSESQHIDLDSIPAPWSRLLSYENTTEHLVMRCNDIEKSTEKLENYNDLQIDKLSSKG SNLNTRWKNMLAKAVKRSQMSEKLNIMSATFWNEMEYVQNETQAHINTLNVFGIGSSHHV NLPIALAESEELLKSILGVVDSHNVANRAHQCAINLIDQWSNTSSILTDQMAEATQMKYD LINAKNRLYDLIQNVYKTSDTTTMSKSIHAANERNLIKLIHQHQKIAQLHTDINDIFKTN VIPETDTVFNMIVDNYQKLRQDLGTIIQLKTIVGETSSQSAQQLNEIRQEMLPMAKNHSN NLMNAAREYVGLFQNTKNSAEVAMLASTAYKNITDSVLMARDLTARAKQTVIECENELYP KEGESIIEKSTKSLKKSQKIHQHSLKEMEKLEDLDFSLKSQWRKVDSIKNTIWQTGLRNN NLSLTLNSFSKNDTQEFLKRTIEAAKRVSEQMREVRRSAIAITGSDIYKLKLKLASLEPQ WAVKYGLAEENVSQSMRNIKDIKNVLSTIETTSRRNDEKFQKWNQTMSVLMQDLKNKIAK ARHIADGIRVSLESKSVKCVRSYTLPTLGLSTANNIKLSVALNTKLATTPILFMQGEDNR FLAIEMVKRKIRFLWNLGGDTVSITHPMELHKKDLNYDEAWYQIEANRTMNVGNLIVRQM GTGWNKASTVQSTSSQPESTRILFTPNKRLWIGGVPDEIRPQELLAQDAGLNAVLSNVYI DEKRIGLWNFMHTEGECDGATLGAREITAIDGARHFNGQGYSVVRKERSKPYKKNFFALQ LTFKTLDENALLFLAIDEKNNRSISLTLYDGKIMFRIDYGGTSKLEISTGKKYNTGQWTS VEVAREFTSKRSTENGQMKVNNEEPLTGAPTTPITSALLPDLSRAVYYLGGIPPDFKSAI TKAPGADFAFLGCMKDIQINGETYDPLETSLRNGVEASCRESITRAGFYGNGFLELPNHS LRKRANVGFVFKTLRSDALILLSVVPHQELANNYYDEKDLRSNYSFALVNGRIIFWADAG RGRIELISNNTLNDGEYHTVNVLKLGRKFELRVDDEYQMSKSLSSQPFVISMIEGSGGFY VGGIPNIPEYLNLLERVDAFHGTLKDFVVNNQTISFGDLVNATNVDVGRDGPKMGNHEIY NEILMKTEPISKSFTASPEGCHRVGSYSYEPNAFKFGDTSQSHSVINIGKHLWQTNFDIQ FEFRTFYPNGLLFFVPGAKEKQKHFFTLTLRNGQLNIVARGRKRMEKIMSRKLNDGHWHR ITLKCVNKLLTIRIQSDGNTNAIDEEDFKMPRRISASNMMYIGGIVDSMLSFSAELSSKL EQFKGCIRRFLVNNISQDLAKPGRHFGIGQCFPQVEKGSFFAGDAYAIYKRIFHVGKYLE INFEFRTSEMQGMILSVAEPVGFPAISIELHKGKIIMSCDLGDGHPFRVESNVPSKYTLC NNYWHNVSAIYDSNQIAIRVDNLPSVNKLKQHETLGKVHTKSPLYIGGMPETAPSGTLLN RDNFKGCIRNVVIRNELKDWTDMDELQNVLLSECLIMS NT seq 10017 nt NT seq  +upstreamnt  +downstreamnt atgctgggtgtaaaagaaaacatgtattggcagtatttttttgtgtttgttagtttgcat gcaatcgtttattgtgaaaatttacagtccgatgatgagtttgaaaatgatcaagtgatg ttagaaggtcgcaaagtgaataaccattatcagcaaagcaatgtgcaacaaaattattac cgatttttatccgatgaaccatcgaatgcggagtcaatcccattcgatgcggtcgatcga aaatatgtgcgtcgaacaaactttcgacgtcgtaaaatgggtagcagtaccaataaaaaa accatatttctccgaggtcaacgtcgtcgtcataacaaaaatggatttcaagcggtgtct gacatggattacatgccatccgatgctgataataataaagacaatgatgaggagagcacc gatgttggcctatggccgcccgttttgaatgttgcaccaagagccattctgcatgccaat ggaacgtgtggtcaatatcatcgtgaagaattttgtcacacaatcgatgcccatccccaa cggcaacgtaaaccaaaatgcagtgtatgcgattcacatgatggtgatcgacgacatccg atcgagtacgtaattgatggatcacaaaaatggtggcaaagtccaactctaaatagcggc gcagaaaatgaatacattaccattacggtggacttgaaacagaactatcaagtgatattt gtatcattcaaagcggctgtatctccgcgacctgcatcatggatactggaacgttcattt gatggtgttgaattctttccatggcaatactttggtgtgaatgatgacgattgtcgcaag cgatacaatttacccggtcaaaatgaaccttaccaaattgatagtgacgatcaaatcatc tgttcaacgcaattctccaaagcggttcccttggaaaacggcgaaattcatgtgaaatta ttggaagggcgaccgggaattaagtcaaaagtaacgccaaccaatttattggactttaca ttggcacggtatttgcgattgcgattccaaggaatgcatacaacacttcagtcaccaaat agcattcagtggctcgtcgatcgtgatcagctgaacaaacggagcttttactcgttgcgt tatattaaaattggtgcacgtctcgattgcagtgggcatgcgctacgcgctaaacaatat aacgatgatgagataactgaatgtgattgtgctcacaatacatgcggaataaattgcgaa aaatgttgcccgttgtacaatcaaaaaccgtacaaacaaggcacagcaactgatagcaat aagtgcgaaaaatgtgagtgctatggacattccagtgaatgctattacaatccagaggtc gatcagcgaggcttgagtattaacacagatggcgtttatagtggtggcggtgtttgtctc aactgtacagatttaaccactggaattaattgtgagaaatgcatcaacaactattatcga ccgtatggtgtgtcgccaaatgttaaacaaccgtgtattccatgtgaatgtaatcccatc ggtacgattggaacttgtgcaggtatcggcgggacttgtacgtgtaagcccggctttgct ggtcccaagtgcgatgaatgtttaccgggatatagtggaataaattgcacacaatgtcca tgtgatacgcgcggcactatgcctggaggtgtatgtgaaacacactgccaatgcaaactc tatgctgaaggagagctctgcgatagatgtacacctggttactttggattatcgcagtca aatccagaaggatgtacaaagtgctactgttccggagtgggaaatatatgtgaaagcagt aacattgtaaccaatacgtatgaaacgcttgaagattggaaaataacggatatttcacga tcatacttattgcacccatccaaagataacgaaaccggatttttggtattcaacatgtat gaaatgtatgaatcgatttattggcttgcgcctgatttgtattgcggcaataaactacag agttatggatccagttttgtttttacaatttcatggattgttgttcgtggtgacacaagt ggcaaaccgacattctgtcccacaatgattataatcggtgcgaatggtatgaaaattgcc tacggtgacacaatattttcggaaacaaattcgaccatgtcaatccaattaaccgaacat gaatggtatcaaataccacaaacaatggataacacaggacgacttcaacaaaatgaatac cgcggtgattatgtgtctcgatcgcaatttctgtcggttttgagtaatattgaaagtgtt atgctgcgaggatcattccacacagatcaagcggaaagtgttttgattcgtgcttcactg gagtttggtaaaggcagcaaaaacgaagtgccctcaaatttggtggaacaatgtgtgtgt ccacagggatacatcggtttatcgtgtgaaacgtgtgatttcggctatgtcagagcctat gaaaatacaacttcggaacacctgggcatttgtctgccatgctcttgcaatggacatgct gaatcatgtgatttaacgtctaataaatgtagccaatgtacacataacactaccggatca agatgtgaatcttgtgcggtgggctattatggaaatgccaaattgggtacaccacacgat tgtaaacgatgcgcttgtccattaatcaacgacgaaaataatttctcaccaacgtgccaa tttagagactctagttatgaacaacaaaacgaagtcattagcgattatagtttgatttca tatcaaaataatgataattatatttgcaccaaatgcccggaaggatatgttggagatcat tgcgaaagctgtgccgatggatactacggtattccaacgaaagtatcatcgaaatgcttg aaatgcccatgcaatgggggaccgtgtgatccgatcacaggcaaatgcatcacttgccaa ggaaacaccgaaggatggcgatgcgaacaatgtaaatcgggctactttggaaatccagca aaaggctgtgaactgtgccggtgccaaagtgatggatccgaaaacaccgattgcgacaga gaaagtggccaatgtaaatgcaaagcgaattatgatggatatcagtgcgatggatgtgcg tttggatacgcaaacattagtcttggttgtccgtcatgcagttgcaatggtagcggtgcg attgaaaatttctgcgatacccatactggccaatgtccgtgtaaaatgggtgtcgaagga ttgcagtgtgatgaatgtatggatggtttctacggtctttcaacggacggatgtcaagaa tgccactgcaatccgctgggctctgttgcgcaaaattgtaataaacataatggacaatgc ttctgtcgagagaatgtaacaggtcgaacatgtgataaatgctcggaaggattttggaat cttgaatcgggtaaaggctgtcaaagttgtgcctgcaatgccatcggtagcgtcaatttc agttgtaatgcatataccggtcaatgtgtttgcaaagtcggcgttggtggtccaatgtgt gactcttgcctcgaaggtttttatggactctcagcgactggatgtaaacattgcgatgaa tgttcaaattcagcatacaattgcgatccagaatcgggtcgatgcatttgtccaccgcac agtaaaggaatcgattgcaatcagtgtatgccaaattcatatggatgggagcacaagaaa ggatgcaaattatgtgaatgtgatcacaccggatcgattggacaatcgtgtgatgtgtac accggccagtgtatgtgtcgtgaagggttcactggacgtgaatgcaatcgatgctcgatt ggatactttggctatccgaactgtgaaagatgtggatgcaaccatgacggttcattaacg acgaactattccgaaccaattccatgcaatgacgaaggacagtgttcatgtaaatcattg gtaaccggtaaaaaatgtgaccaatgtatcgaatcaacatttggattgtcaaaatacaat gcagatggatgcactaaatgcttctgttttgaccgatcaaagaaatgtatacagagtgat tttagttggggattgatacgagctaatgatgcacgatgtttgaccgttgaataccaaaat attgaatatgtggcacttcaaacacaagataacagcacggaaattagctatgaaacgaat ttacaaattttggacggtttgtctgtcattcctggcacaagtggtaatatttctatgaaa tcatctcgtggatttgaaacaccactttactttgaaatgtccaagcaattcctcggagat caactgctgagctatggtggtttattcaagtttaacattgaaatgatggaatgcaaaacg gaactggatcaaataacgctacaacacttcccattgattcgaatgcgttcacataattcg cttacattggactattttggaccggagtcattccataccagttcaaatgtcactgaaacc attcgtatgattgaagaacattggcgattgcatcccagcggtgaagtggcatcacgtggc atatttatgaccgccttacaaaatatcacatatattttgatacgtggagcatcatcagtt gcatttacaagtctaacattatcgaatgtgacattggagacggcaattttcatatcggga tcgaaaagtaatttggcgatcggtgttgaagtgtgtcaatgtccagagatgtatgaagga tcatcatgtcaaaatccatctgatggatactatcgccacaaagaaagtcatgttgaaaca tctcatcagcactacgagaacttcgttggaaagtcggtaccgtgtgagtgccacagtcga agcaatcaatgcgacaaagagactggatattgtaagatgtgtgtcaataacacgggcggt gcccagtgcgaactctgtgccgaagggtattatggtgatccaatcgtatatggttgtcag tcgtgtccatgtccagaaacgcatcgtaatttcgccaaaggttgtacattctataatggt cgagttagttgcagttgtcgttcgggctatattggtgatttatgcgacttctgcgcgccc ggtttttatggttcaccagaacaagagggtggaggttgtattgattgccaatgtaatgaa cacggctcggtttcaattgaatgtgatgcattcactggtgactgcatgtgtaaagatggc attatcggtacaaaatgcgataaatgtgctcaacctacatctattttggaaccaaatggt tgtcaagtttgtgataattgtacgctgatactgctcgaaaattccaacgacttggcttac tacatacaaagtgaaagtcagcacattgacttagactcaataccggctccatggtctcga ttattgtcgtacgaaaatacaaccgagcatttggtgatgagatgtaatgacattgagaaa tctacagaaaaactcgaaaactacaacgatcttcaaatcgacaagttgagttcaaaagga tcaaatttgaatacgcgttggaaaaatatgttggcgaaagcggtgaaacgcagtcaaatg tcggaaaaattgaatataatgtcagccacattctggaatgaaatggaatacgttcaaaat gaaacacaagcccatattaatacgctcaatgttttcggaattggcagcagtcatcatgtg aatcttccaattgcactggctgaatccgaagaactattgaaaagtattttgggtgtcgtt gacagccataacgttgccaatcgtgcccatcaatgtgccattaatttgattgaccagtgg tccaatacgtcatcaattctcaccgatcaaatggctgaagcaacgcaaatgaaatacgat ttaattaacgccaagaatcgattgtacgatttaattcaaaatgtctataaaacttccgat actacaacaatgtcgaagagtattcatgcggccaacgagaggaacctgatcaaattgatt catcaacatcagaaaattgcacaacttcataccgacatcaacgatatttttaaaacgaat gttattccagaaacagacaccgtgtttaatatgattgtcgataattatcagaaactgcgt caggatctcggcaccattattcaattgaaaacaattgttggcgaaacaagctcacagtcg gcccaacaactcaatgagatacgtcaagaaatgctaccgatggccaagaatcattcgaat aatttgatgaatgccgcacgtgaatacgttggtttgtttcaaaatacgaaaaatagtgca gaagttgcaatgcttgcaagtacggcttataaaaatatcaccgactcggtattaatggcg cgtgatttaactgcacgagcaaaacaaacagtcatcgaatgtgagaatgaactctatccc aaagagggcgaatcaataattgaaaagagcacaaaatcgttgaaaaaatcgcaaaaaatt caccaacactcattgaaagaaatggaaaaattggaagatctggacttctcattgaaatca caatggcgtaaagttgactcaatcaaaaatacaatttggcaaacgggactgagaaacaat aatctttcgctcactctaaattcattttcaaagaatgacacacaggaattcctgaagcgc acaattgaggcggccaaaagagtgtcagaacaaatgcgtgaagtacgacgcagtgcgatt gcaattacaggcagcgatatttacaaattgaaattgaaattggcttcgttggaaccacaa tgggctgttaagtacggattagctgaagaaaacgtatcacaatcgatgaggaacatcaaa gatatcaaaaatgtgctaagtactattgagacgacttcaaggcgaaacgatgaaaaattc caaaaatggaaccaaactatgtcggtgctgatgcaggatttgaaaaataaaattgccaaa gcaagacacatcgctgatggtattcgtgtttcattggaatcaaaatcggtgaaatgtgtt cgatcatatacgctaccaacgttgggtctgtcgactgccaacaatataaagctatcagtg gcattgaatacaaaattagcaacaacacccattctgtttatgcaaggagaggataatcgc ttcttagccattgaaatggtgaaacgaaaaatacgttttctttggaatttgggtggcgac actgtatcaataacacatcccatggaattgcataaaaaagatttgaattatgatgaggca tggtatcaaatcgaggccaatcgtacaatgaacgttggcaatttgattgtgcgtcaaatg ggtacgggatggaataaagcatcaaccgtacaaagtacatcgtctcaaccagaatcaaca cgaattttattcactccaaataagcgtttatggattggtggcgtaccagatgaaattcga ccgcaagagctattggcacaagatgctggcttgaatgctgtgctcagcaatgtatatatc gatgaaaaacgaattggtttgtggaatttcatgcataccgaaggtgaatgtgatggtgca acattgggtgcgcgtgaaataaccgccatcgatggtgcacgacatttcaatggccaaggt tattcggttgtgagaaaagagcgctcaaaaccgtataagaaaaactttttcgccctgcag cttacatttaaaactttggacgagaatgcgctacttttcttggcaattgacgaaaaaaat aatcggtccatatcgcttacactttatgatggaaaaattatgttccgcattgattatggt ggcacatcgaagctggagattagcacgggcaaaaaatacaatacgggacaatggacaagt gtagaagtggcgcgtgaatttacatcaaaacgaagtaccgaaaatggacaaatgaaagtg aacaacgaagaaccgttgactggcgcaccaacaacaccaattacatcggctttgttgccg gacttgtcacgagccgtttattatttgggcggaattccgcctgattttaaatcggcaata acaaaagcaccgggagccgattttgcttttctgggatgcatgaaagatattcaaatcaat ggcgaaacgtacgatccacttgaaacatcgcttcggaatggcgttgaagcatcatgcaga gaaagcataacacgagctggattttatggcaatggttttctcgagctaccaaatcattcg ttacgcaagcgagcaaatgttggattcgtatttaagacgttacggagcgatgcattaatt ttgttgtcggtggtgccacaccaggaactggccaataactattacgacgaaaaagatttg cgctcaaattattcatttgcattggtgaacggtcgcattatattttgggccgatgctggt cgtggccgaatcgaacttatctcgaataatacattaaacgatggtgaatatcatacggtg aatgtgctgaagttgggccggaagtttgagttacgtgttgatgatgaatatcaaatgagc aaatctttatcatcacaaccatttgtaataagtatgattgaaggttccggtggcttttac gtcggtggcattccaaatataccggaatatttgaatttactcgagcgtgtcgacgctttt catggaacgctcaaagatttcgttgtgaataatcaaacgatatcatttggtgatttggtt aatgcaacaaatgttgatgttggacgcgatggaccgaaaatgggaaatcatgaaatctac aatgaaattttaatgaaaacagaaccgattagtaaaagtttcactgcttcgccagagggt tgccatcgggtcggctcttattcatacgaaccgaatgcttttaagtttggcgatacatca cagagtcattctgtcataaacattggcaaacatttgtggcagacaaactttgatattcaa ttcgagtttcgaacattctatccgaatggactgctatttttcgtaccgggagcaaaagag aagcaaaaacacttttttacgttgactttgcgaaatggacagcttaatattgtggcacgg ggtagaaaacggatggaaaagattatgtcacgtaagctaaatgacggacactggcatcga atcacattaaaatgtgtgaataaacttctgacaatccggatccaaagcgacggcaacacg aatgccatcgacgaagaagattttaaaatgccacgacgtatcagcgcatcgaatatgatg tatatcggtggcattgtagacagcatgctatcattctcggccgaattatcatcaaaattg gaacaattcaagggttgtattaggcgcttcctcgtgaataatatatcacaggatttggct aaacccggacgacactttggcattggtcaatgctttccacaagttgaaaaaggttcattt tttgccggcgatgcgtatgctatttacaaacgaatcttccacgtgggaaaatacttggaa atcaactttgagttccgaacatccgaaatgcaaggcatgatattgagtgtggccgagcca gttggatttccagccatatcaattgagctgcacaaaggaaagatcatcatgtcttgtgac ttgggagacggccatccattccgtgttgaaagcaatgttccatcgaaatacacactctgc aataattattggcacaatgtatctgcaatctatgattcaaatcaaattgcaatccgtgtc gataatttaccatccgtaaataagctgaagcaacatgaaacattgggcaaagtgcacaca aagagtcccctatatattggcggaatgccggagacggcaccgagcggcacacttttaaat cgtgacaacttcaaaggctgcatacgaaatgtggtcattcgaaacgagctcaaagattgg accgatatggacgaattgcaaaatgtattactcagcgaatgcttaatcatgtcatag

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