Contarinia nasturtii (swede midge): 116343240
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Entry
116343240 CDS
T08003
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116343240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116343240
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116343240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT
NRDE-2
TPR_6
Motif
Other DBs
NCBI-GeneID:
116343240
NCBI-ProteinID:
XP_031627058
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MGDGMDRNMPEYEQMRSLKIFSDEEILKIKKTRENFEYKITQPSRVIKDYVEYIKYERGL
IATTKERIKQQKINTSHSIIMQIADRMKKLYAQALSKFTNNIRFWDEYVKFLQTFKYIKD
ISPTFERMLQFHSDKVDVWIRAILWEFKENFNDERVKRLLLRAQQRHPTSEKLYLTFFQI
ELENKCQSDELEALQHADVVYSSSKKKFTNIDFYIEMLNIVDKFKYASSIQQTILEDMRV
MFPREEILWHKLAQRELNGLSTVDSTMDFSGVIKTEGGECNGEDSKEGLKKLKIENLSAP
PQHTLRKRIELSTCIYEEAVKQIDTKKMWNYYIEAMMELNSDLSTQPVLKRYALRRAFEG
ANESNHMSEDHYLQYIHQLITNNPQDEAIEKVFQKATKMYENSLAIWLLCLRYYIQNENG
FSKVQENFRKAKIVLGPRGAEVWELYLIYLKTNCTKAEIQREFKAFILELSLLKYATFNQ
LKAQVLELVATTAKMKRAREVYEKFIKDHPDGYEYHDMMATLEAKQMKRDVEKERECMDK
LIEHFGKSRADVWLRYMRFERNAGEPKNVSKLHKTALATLNPELLDDFSAQYNFFSNGVV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacggaatggatcgtaatatgccagagtacgagcaaatgcggtcgctaaaaatc
ttttccgacgaagaaattctaaaaataaaaaagacgcgagaaaattttgaatacaagatc
acacaaccatccagagtaatcaaagattatgtcgaatatataaaatatgaacgaggtttg
attgcaacgaccaaagaacgaataaaacaacaaaaaatcaacaccagtcattcgattata
atgcaaattgccgatcgcatgaagaaattgtatgctcaagctctgtcaaaattcacgaac
aacatccgcttttgggatgaatacgttaaatttttgcagacatttaaatatatcaaggat
atttcgccaacgtttgaacgaatgttacagttccactcagacaaagtcgatgtgtggatt
cgcgcaattttgtgggaatttaaagagaatttcaacgatgaacgcgtcaaaagactgctg
ctacgtgcgcaacaacgccacccaacgtctgaaaaactctatcttacattcttccaaatc
gaattggagaataagtgtcaatcggatgagttggaggcattgcaacatgcggatgttgtt
tacagcagcagcaaaaagaaattcaccaacattgatttttacattgagatgctgaacatt
gtcgataaattcaagtacgccagctcaattcaacagaccatattggaggatatgcgagta
atgtttccgcgtgaagaaattttatggcataaattggcacagcgtgaattgaatggcctg
tcaacggttgattctacgatggactttagtggtgtgataaagacggaaggcggtgaatgc
aacggcgaagacagtaaagagggtttaaaaaagcttaaaatcgaaaatctatcggctcca
ccacagcacacactcagaaaacgcattgaattatcgacttgtatttatgaagaagctgtt
aagcagattgatacgaaaaaaatgtggaactattacatcgaggccatgatggaattaaat
agcgatttatccacacagccggtattgaagaggtacgctctgcgaagggcattcgaagga
gcaaatgaatcaaatcatatgtccgaagatcattatttacagtatattcatcaattaatc
acaaacaatccacaagatgaggccattgaaaaggtcttccaaaaggcgacgaaaatgtac
gagaattcattagccatatggcttctgtgtttgcgctattacatacagaatgaaaatggt
ttttcaaaggtccaagagaatttcagaaaagctaaaatcgtgctcggcccaaggggcgca
gaagtatgggaattgtatttgatatacttgaaaacaaactgtaccaaagccgaaatacaa
cgcgaattcaaggctttcattttggaattgtcacttctaaagtatgccacattcaatcaa
ttgaaagcgcaagtcttggaacttgtagcaactacagccaaaatgaaacgagcccgtgag
gtttatgaaaaattcattaaagatcatcccgatggctacgaatatcatgacatgatggcc
acgttggaagcaaaacagatgaaacgcgatgtggagaaggaacgagaatgcatggataag
ttgatagaacattttggtaaaagccgggctgatgtatggttgcgttatatgcgctttgaa
cgtaatgctggtgaaccgaaaaatgtgagcaaattgcataaaactgcattggccacactc
aatccagaactcttagatgatttcagtgctcagtacaactttttctcaaacggagtcgtc
taa
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