Contarinia nasturtii (swede midge): 116343263
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Entry
116343263 CDS
T08003
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04144
Endocytosis
cns04391
Hippo signaling pathway - fly
cns04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09132 Signal transduction
04391 Hippo signaling pathway - fly
116343263
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116343263
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116343263
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cns01009
]
116343263
Protein phosphatases and associated proteins [BR:
cns01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116343263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Par3_HAL_N_term
Motif
Other DBs
NCBI-GeneID:
116343263
NCBI-ProteinID:
XP_031627098
LinkDB
All DBs
Position
Unknown
AA seq
1388 aa
AA seq
DB search
MFDVPPKCPALADKLTGLFSWRQTYRVHHRQKGITHTSYLNKRHSLTLSRSGSSSDQAAD
TSTTDPDSWTVVHHLETQSGGILDSDDQVNDVADDRELIVANFEDSGPDPGVPQGGGDGA
SGSSVGTGSPDIFYAPPNETKYGSQHTHATNTDTNNIAPHIEVTDANQMNTSGVGLQVRR
SSDPSLHQLGMEIPNDPIVNNFSPYNDATKRWSAAPVCRSETDQVDRLLAVTVDDRKTNA
SQLSPSWETQQYESPSQQQQLQVPKSPNNETTPSQFSRSGRLSMQFLGDGNGYKWMDAAE
KVQNSATSQAYTSKSLPRELAKRREPLGQAYESIRDKNGKMLLIINENRGPLGLSAIPDP
KNGGLLVQNVDKDSPAERGGLQRGDRILEINGFKLIGVSESSIQDYLRQNCAAPELRMRV
IKTTNLIQKLKKEIDDMVEAEEKQQQQQQVAATKSANSSPTRKVPGALSSNALALRNNNK
RKIGRKIEIELCKGQKGLGFSVTTRDHQTGGDSLIYIKKILSAGAAIEDGRLRPGDRLLE
VDNVTMTGKSQSEVVEILRATKTGSTVRLVVSRQQDLSELSDDKDVISEINCEQENDKTT
PPKPPPPVLPQKPILRQSAKKSLDLSSTSFDENTNMHTPLKEICRESISSNGSEQNHSFS
FRNREILTLHIPVNDTEKAGLGVSVKGKTGSQNSSNESNSSRTDGDLGIFVKSVLKGGAA
SRDGRLKMNDQLLMVNGVSLLGQSNAEAMATLRKTMVHLPGKYPKMITLQVARRIIRPNS
TIEAHELSNNSTSSASEQSGKTVIYLSPDKNNHTESMHIMKNGNSSSQRSMNRWSNPVLD
RLTGGVVNHVNQKPNGMPHLAVSSGLRNDSYYMATNDTWSPMQMKENNSVLIEDDQEPLA
PIFNMDATLNRTHDSNHSIHKQPISPSSPNPCETTYSSQLSLETNPPVDPFNRDAIGRRS
MSEKHHAALDAKETDTYQRNKKMREERERRARPKTIATLGSMESIVAAVKNTSKNSDLSR
EALDRITDLGPSLGMKKSSSLESLQTIVQEIQLSDEPRGPSALRTPRGRGRDEFVRAEVE
RPSRKHWILEGNANTTSNEHDDGFMNRHGPFQSSLNEGKNKRAKKPGILRGIGHMFRFGK
HRKDGIAAVDSFDPNATMNITLPSKSSNKENKLSTLSSNGLNASGRGKPPNYQPPPPVAV
GIPVASSNGIHQNDVFNHRYSHYVNYDELQQQISPPPQNEQLSESTLAQMRLQVMQQRVK
VEEESRRHQHYHSQRSTRTVDLNSHHQRPTSTYYEYETFQYNGGIGSYNPNITTPPTSNF
NHHVALNGSQRKIHNGQSPLKYRSPNSHGGSMRNRGPFVTQVTIREQHGQSNGAQSPHNA
ITASASKI
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgtgccaccaaaatgtccggcattggccgacaaattgactggattgtttagt
tggcgccaaacatatcgtgtacatcatcgacaaaaaggcattacgcacacatcatatcta
aacaaaagacactcattgacattatcacgaagcggaagctcatcggatcaagctgctgat
acatcgaccacggatcctgactcatggacagttgtacaccatttagaaacacaatcgggt
ggtatactcgattctgatgatcaagttaacgatgtggccgatgatcgtgagctgattgta
gcaaattttgaagattccggaccggatccgggcgtaccacaaggcggtggcgatggagcc
agcggtagttcggtcggaacaggcagtcccgatatattttatgcaccaccaaatgaaacc
aaatacggttcacaacacacacatgccaccaatactgatacgaataatattgcacctcat
attgaggtaaccgatgccaatcaaatgaatacgtccggagtgggattgcaagtcagacgt
agcagtgatccatcgctgcatcagcttggtatggaaattccgaatgatccgattgtgaat
aattttagcccatataatgatgcaacaaaacgttggtcggcagcaccagtgtgccgaagc
gaaacggatcaagtggatcgattattagccgtcaccgtcgatgatcgaaagacaaatgct
agtcaattgtcgccatcatgggaaacacaacaatatgaatcaccatcacaacagcaacaa
ttgcaagtgccgaaaagtccaaataatgaaacgacaccatcgcaattttcacggtctggc
cgattgtcgatgcaatttttgggtgatggtaacggttacaagtggatggatgcagcggaa
aaagttcaaaattcggccacatcacaagcgtacacatcaaaatcgttgccacgtgaattg
gccaaacgacgcgaaccattgggtcaagcatacgaatcgattcgagataaaaatggcaaa
atgctattgataatcaatgaaaatcgtggcccattgggcttgtcagccataccagatccg
aaaaatggtggacttctcgtgcaaaatgtggacaaagacagtccggccgaacgtggcggt
ttacaacgtggtgatcgtattttggaaataaacggatttaaattgatcggagtatcggag
agttcgatacaagattatctacgacaaaattgtgctgcacccgaactgagaatgcgtgtg
atcaagacgacaaatcttattcagaaattgaaaaaagaaattgacgatatggtcgaagct
gaggaaaagcaacagcaacaacaacaagtagcagccacaaaatccgcaaactcatcgcca
acacgcaaagtacccggtgcattgtcatcaaatgcgcttgccttacgaaataataataaa
agaaaaatcggacgcaaaattgaaattgaattgtgtaaaggacagaaggggcttggtttt
agtgtgacgacaagagatcatcagacgggcggtgattcattgatttatattaagaaaatt
ttatcggccggagccgccatcgaagacggacgattaagacccggtgatcgattgcttgaa
gttgataacgttacgatgactggcaagtcacaaagcgaagttgtggaaatactgcgagcc
acaaaaaccggttcgaccgtacgattggtcgtttcaaggcaacaggatctcagcgaatta
tcggatgataaagacgtcattagtgaaatcaattgcgaacaagaaaatgacaaaacaacg
ccaccaaaaccaccgccacccgttttaccgcagaaaccaattttaaggcagtcggcaaag
aagtcactcgatctatcatcaacatcattcgatgaaaacacaaacatgcacaccccgctg
aaagagatttgccgtgaatcgatatcgtcaaatggaagtgaacaaaatcattcgttttcg
tttcgcaatcgtgaaatactcacacttcacattccagtgaatgatactgaaaaggcaggt
cttggcgttagtgtcaaaggaaaaactggttcacaaaattcgtcgaatgaaagcaatagt
tcacgaaccgacggtgatttgggcatttttgtaaaaagtgtattgaaaggtggagctgca
tcgcgtgacggtcgactcaagatgaacgatcaattgttgatggtaaacggtgtttcgtta
ctcggacaatcgaatgctgaagccatggctacgcttcgcaaaacaatggtacatcttccc
ggaaaatatccaaaaatgatcacactacaagtagcacgccgtatcatccggccaaacagt
acaatcgaagcgcacgaactaagcaataattcaacatcaagtgctagtgaacaatcggga
aaaacagtaatttacttaagtcccgacaaaaacaaccacaccgaatcgatgcacatcatg
aaaaatggcaattccagctcacaacgatccatgaacagatggagcaatccggtactggat
cgattaactggcggtgttgtaaatcatgtgaaccaaaaaccaaacggaatgccacacttg
gctgtatcgagtggtttacgcaacgatagttactacatggcaacaaatgatacatggagt
ccaatgcagatgaaagaaaataactcggttctaatcgaagacgatcaagaaccattagca
cctattttcaatatggacgcaacactgaatcgaacgcacgattcgaaccatagtatacat
aagcaaccaatatcgccatcatcaccaaatccatgcgaaacaacatactcaagccaattg
tcattggaaacaaatccaccggttgatccattcaatcgggatgccattggacgacgcagt
atgtcagaaaagcatcatgccgcactcgatgccaaggaaactgacacatatcaacgcaat
aaaaagatgcgtgaagaacgtgagcgtcgtgctcgaccaaaaacaatagccacacttgga
tcgatggaatcaattgtggcggccgtgaagaatacttcgaaaaattctgacctaagccga
gaggccctcgatcgtatcacagacctgggaccatcgcttggtatgaaaaaatcgtcgagt
ttggaatcgcttcaaacaatcgtacaagaaattcaattgtccgatgagcccagaggacca
tcggcattgcgaacgcccagaggcagaggcagagatgaatttgttcgtgccgaagtcgaa
agaccatcgcgaaagcattggatactcgaaggaaatgcaaacacaacatcaaacgaacat
gatgacggtttcatgaatcgtcacggtccattccagagctctttgaatgagggcaaaaat
aaacgtgcaaagaaaccaggcattttgcgtggcattggacacatgttccgtttcggtaaa
catcgaaaagatggcattgcagcggtcgattcatttgatccgaatgcaaccatgaatatt
acgttgccgtcaaaatcgtcgaacaaagaaaataaattgtcaacattgtcatcgaatgga
ttgaatgcatcgggtcgtggcaaaccgccaaattatcagccaccaccaccggttgctgtt
ggcataccggtcgcatcatcaaatggaattcatcagaatgacgtatttaatcatcggtac
tcgcactatgttaactacgatgaattgcagcaacaaattagtccgcctcctcaaaatgag
caattatccgaatcaacattagcgcaaatgcgtctacaagtaatgcaacaaagggtgaag
gtcgaagaggaaagtcggcggcatcaacactatcattcgcaacgatcaacccgaaccgtt
gatttgaatagtcatcatcagcgtccaacgtcaacctactacgaatacgaaacgtttcaa
tacaatggcggcatcggcagttacaatccaaatataacaacgccaccaacatccaatttc
aaccatcatgtagcgctgaatggaagtcaacgaaaaattcacaacggtcagtcgccgtta
aaatatcggtcgcccaattcacatggtggcagtatgagaaatcgtggtccatttgtaaca
caagtcaccattcgagagcagcatggacaatcaaatggcgctcaatcaccacacaacgca
atcacagcgtctgcatcgaaaatctga
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