Contarinia nasturtii (swede midge): 116343487
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Entry
116343487 CDS
T08003
Name
(RefSeq) vesicular inhibitory amino acid transporter
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116343487
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cns02000
]
116343487
Transporters [BR:
cns02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
116343487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
116343487
NCBI-ProteinID:
XP_031627412
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MDKLTFLNKFRSLPIPPVKNFLNVAVQTARQTMPDKPNKGEYVEPNGPPPVPPRPQSVHF
SDDIQRSQHIEHHELNPFNTTNPFGQETNGTQECTSFSYEQGYQRSENYLNRQPSVASTE
SSFVGGEGASNEKINEFQAAWNVTNAIQGMFIVSLPFAVLRGGYWAIIAMVGIAHICCYT
GKILVQCLYEPDPNTGEMVRVRDSYVSIAKVCFGPKIGARLVSIAQIIELLMTCILYVVV
CGDLMSGTFPEGALDSRSWMMLCGIFLLPLGLLKSLHMVSVLSFWCTMSHLVINAVILGY
CLLEIGDWGWSKVKWSIDMGNFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFEWMLDWSH
IAAAVFKALFGYLCFLTFQNDTQQVITNNLHSSGFKGLVNMFLVIKAILSYPLPYYAACE
LLERAFFRGKPKTSFPTIWALDGELKVWGFAFRVGVIVGTILMAIFIPHFSILMGFIGSF
TGTMLSFIWPCYFHLKIKGHLLDQQQRAWDYFIISLGILFGVIGIYDSGNALIEAFEIGL
PF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggataagttaactttcttgaacaagttccgatcattaccaattccaccagtgaagaat
tttttaaatgtagctgtacagacagctcgacaaactatgcctgataagccgaataaagga
gaatatgtcgaaccgaatggcccaccccctgttcctccaagaccccaaagtgttcatttt
tcagatgatatccaacgaagccagcacattgaacatcatgaactcaatccctttaacact
acaaacccgttcggacaagaaactaatgggactcaagaatgtacatcatttagttatgaa
caaggttatcaacgctcagagaattacttgaatcgtcagccaagtgttgcatcaactgaa
agttcatttgtcggtggtgagggagcttcaaatgaaaaaattaacgaatttcaagccgct
tggaatgtcacaaatgctattcaaggcatgttcatagtttccttgccattcgctgttctt
cgtggtgggtattgggccattatagctatggttggaattgcacatatttgttgctataca
ggaaagattttagttcagtgtttgtatgaaccagatccaaacacaggtgaaatggttcgc
gttcgggatagctatgtatcaatagcaaaagtgtgttttggtccaaaaatcggggcccgt
cttgttagcattgctcagattattgaattattaatgacttgtatcttatatgtggtcgta
tgtggtgatttaatgagtggaacatttccagaaggcgctcttgattctagatcgtggatg
atgttatgtggaatctttttgttaccacttggattactaaaatcattgcacatggtatct
gttttgtccttttggtgtacgatgtcacatttggtaattaatgcagttattctgggatac
tgtttattggaaattggagattggggctggtccaaagtcaaatggagtattgacatgggg
aatttcccgatttcccttggtgttatagtgttttcatatacatcacaaatattcttacca
acactcgaaggtaacatgattgatcgatcaaaatttgaatggatgttggactggtcacac
attgcagcagccgtattcaaagcattgtttggatatttatgctttttaacatttcaaaat
gatacacaacaagtaatcacgaacaatcttcattcgagtggttttaaggggttggttaat
atgtttttagttattaaagcaatactcagttatccattgccatattatgctgcttgcgaa
ttacttgaacgtgcatttttccgaggtaaaccaaaaacgtcatttccaactatttgggcg
ctcgacggtgaattgaaagtctggggttttgcatttcgtgttggtgttattgttggcacg
atattaatggcaatatttattccacatttttcaatcttaatgggttttattggaagcttt
actggcacaatgctgagtttcatatggccatgttacttccatttgaaaataaaaggtcac
ttgctagatcaacaacaacgtgcttgggattactttattatatcactgggcatattattt
ggcgttataggtatttatgactcaggaaatgctttaattgaagcatttgaaatcggttta
cctttttaa
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