Contarinia nasturtii (swede midge): 116343569
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Entry
116343569 CDS
T08003
Name
(RefSeq) netrin-B
KO
K06843
netrin 1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cns00536
]
116343569
Glycosaminoglycan binding proteins [BR:
cns00536
]
Heparan sulfate / Heparin
Axon guidance molecules
116343569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
NTR
EGF_LMN_ATRN
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
116343569
NCBI-ProteinID:
XP_031627565
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MMIHWCNRYLIVLYCVFHHCYAGYTFGEDYPKKSNYVQALQTDPCYSDDRAKRCIPDFVN
AAYGSKIVASSVCGQNGPSRYCEPNDVMRPYDNTCYVCDRSDPQKTFSPAALTDLNNPNN
VTCWRSDPIQPPNGPNAPPDNVTLTLNLGKKFELTYVSLQFCPKSLKPDSIAIYKSADYG
VTWQPFQFYSSQCRRVYGRPNRAPITKANEQEARCSDTHRHSGDLTSGMYGGRIAFSTLE
GRPSASNFDQSAVLQDWVTVTDIKIIFHRLQMPSDVLDEELMIEQTKLYSNKLHASDSMV
MSKEKKSPLDNLVSSTMSTMSTQNYAVSDFAVGGRCKCNGHASRCLTDDKGQLYCDCKHN
TAGRDCEKCKPYFFDRPWGRATYRDANECKACDCNGHARRCRFNMELYKLSGRVSGGVCL
NCRHATTGRHCHYCKAGYYRDPSKSIGHRKVCKPCDCHPIGSSGKTCNHTSGQCPCKDGV
TGLTCNRCARGYQQSRSHITPCIKIPRVITALQQQNTAPEVQQYDSDPYQTDSDNGGGGG
GSGRECGKCKSGTKRLNLNKFCKRDYAIMGRIVEREPSRYAKDSPYQSTKFNIQIQAVFK
KSQDSAATTVRKSVPLIISAKDLECRCPKLKANRSYLILGKDIESPSGTVGIGPRSIVIE
WKDDWYRRMKRFQRRDHACG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgatgatacattggtgcaatcgatacttgattgttctctattgtgtgtttcaccattgt
tatgcgggctacacgtttggtgaagactatccaaagaagagcaactatgtacaagccctg
caaactgatccatgctactcagacgatcgtgccaaacgatgcattcccgactttgtgaat
gcggcctatggatcaaaaatcgtggcgtcaagtgtttgtggtcaaaatgggccatcacgt
tattgtgaaccaaacgatgtgatgagaccatacgataacacatgttatgtatgcgatcga
agtgatccacagaaaacattttcgcctgctgcgctcaccgatttaaataatccgaataat
gtaacttgctggcgatcggatccaattcaaccgccgaacggaccaaatgcaccacccgat
aatgtaacactcacattgaatttgggcaaaaaatttgaattgacatatgttagtctacaa
ttttgtccaaaatccctcaaaccggactcgattgcaatttacaagagcgctgactatggt
gtcacatggcaaccattccaattctatagttcacagtgtcgacgggtttatggtcgtcca
aatcgtgccccaatcaccaaagcaaatgaacaggaagcacgttgctctgatacacatcgt
cacagtggcgatttaaccagcggaatgtatggtggccgtatcgcatttagtacacttgag
ggtcgacccagtgcatccaattttgatcaatcggctgttttacaggactgggtgaccgtt
accgatatcaaaataatcttccatcgcttgcaaatgccatcggatgtgcttgatgaagaa
ttgatgatcgaacaaacgaaattgtattcgaataaattgcatgcatccgattcgatggtg
atgtcgaaggagaaaaaatcaccgctcgataatctcgtatcgtcaacgatgagcacaatg
tcaacacagaattatgcggtgtctgattttgctgttggcggccgatgcaaatgcaatggt
catgcatctcgatgcctcaccgacgataagggtcaattgtattgtgattgcaagcacaat
accgccggacgtgattgcgaaaagtgtaaaccatatttcttcgatcgtccttggggccga
gcaacctatcgcgatgccaacgaatgcaaagcttgtgactgtaatggacacgcgcgacga
tgccgtttcaatatggaattgtacaagctttctggccgcgtatcgggtggtgtttgtttg
aattgtcgacatgcaacaactggacgtcattgccactattgcaaagctggctattaccgt
gatcccagcaaatcaattggtcatcgcaaagtatgcaaaccatgcgattgtcatccgatt
ggttcatctggtaaaacatgcaatcatacatcgggccagtgtccatgcaaagacggcgta
actggattaacttgtaatcgatgtgctcgtggctatcaacaaagtcggtcacatatcaca
ccgtgcatcaaaattccgcgtgtaattacggcattacaacaacagaatacagccccagaa
gttcaacagtatgattctgatccatatcaaactgacagcgacaacggtggtggtggaggt
ggcagcggccgagaatgcggaaagtgtaaatccggaacgaaacggctcaatttgaataag
ttttgcaaacgagattatgcaatcatgggtcgtattgttgaacgagaaccgagccgctat
gccaaggattcaccatatcaatcgacgaaattcaatatccaaatccaggccgtattcaaa
aagtcccaagattcagccgcaacaactgtacgaaaaagcgtacctttaattatatcggct
aaagatttagaatgtcgttgtccaaagctcaaggcaaatagatcatatttaattttgggc
aaagacatcgaaagtccctcaggtacggttggtattgggccacgttcaatagtcattgaa
tggaaagacgattggtatcgacgaatgaaacgtttccaacgacgcgatcatgcttgtgga
taa
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