Contarinia nasturtii (swede midge): 116343572
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Entry
116343572 CDS
T08003
Name
(RefSeq) dorsal-ventral patterning protein Sog isoform X1
KO
K04657
chordin
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116343572
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWC
CHRD
Amnionless
Motif
Other DBs
NCBI-GeneID:
116343572
NCBI-ProteinID:
XP_031627577
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
MNKRQTMMGSVKWRMWAIAVIVILFGVFANQLMVSASPNIRRRHSTPPRLIAEDERDKRG
AECLFGKTLRELGSKWYADLGPPFGVMYCIECSCIPVTKRRRIVARVQCRNIKNECPKLD
CDEPLQLPGKCCKVCPGKANEQQELAQDVPVLQTQEEEEKNMKHFGALLTTRTSYFLNRE
EIKTPYVTNNPLNIIATGRFTFHKKNLYFSFYVSERASRPRAIQFIDETGHILEEIILVQ
SSNIFSVYQNATGKVCGVWRRVPREYRRQLRDEEMNVVLLWGSKLHAELALAGKISKYPA
LSSELFTSLLEAPSDKGVVLKELNGAGGTAVVSTSSGATSSIHLTLVLNGLFLNESADVP
LNVRLEIADKKQKVLQDTVVVKKSNYDYNVIEFSSPVTTQDLRSLTRGKLNLIVESRRRP
EIHIQGSILTRATCEIYQTVLAPTTTESKTTTSGLAWAYMNRDGALVYNIYTDDLKLQES
PLITLVDDSVKRKTDLEDLTPSLSFNNAIGVLDRMGPRVLEPLYANNLAINIATENEQNL
IRGRLIGRQLADARDSEEPIILKRLDSNAPAHLVGMAWVAVDNECTLHYEITLNSYNAQQ
GLELYLEEKPLEAINAPVTTKILEEFKGEYLEGFVMGMSAYELSKLETSVCYLQVKAKES
GTHLLKGKLRSVKIPIQCTMPGIDTNRVGDLGPNDHTDNNVPTDPKCYHSGRFYDEGEQW
QNGLETCSMCACIYGRVKCDKLECPPLDCKEGELRPPRKGECCPSCSPKEMDINSNVTRG
CRLGDQFHAAGSSWYPYLPPNGFDRCATCTCNPITLEVKCPRVQCPPLACSDKIAYRPNK
SACCRKCPEVKEAPVEKKAHDPELMGDQGTKKGTIKSVEEILSHGGCKMTNNFYENGHEW
HPTIPSHGEQKCVKCRCKDSIIKCDRKRCARAACNKSAARNRLNGLTPSPLHENADDCCL
SQCRSRRHQKQKQRQQRERQIDRQQQRSPGNSKS
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagacaaacgatgatgggttcagtgaaatggcgaatgtgggcgatagcggta
atcgtgattttgtttggagtttttgcaaaccaattgatggtttcagcatccccaaatata
cgtcggcgacacagtacaccaccaagactgattgccgaagacgaaagagacaaaagagga
gctgaatgtctgtttgggaaaacgttgcgtgaattaggctcaaaatggtatgccgacctg
ggaccaccgttcggcgttatgtattgtattgaatgttcatgtattccggtaacaaaacga
cgacgaattgtggctcgagtccaatgcagaaacataaaaaacgaatgtccaaaacttgat
tgtgacgaacctttgcagttgccagggaaatgttgcaaagtgtgtccgggtaaagcaaac
gaacaacaagaactagcacaagatgtaccagtgctgcaaacacaagaagaggaagaaaaa
aatatgaaacattttggtgctctgttaaccacacgcacatcgtatttcttgaatcgtgag
gaaattaaaacgccttacgttactaacaacccattaaatattattgcaaccggtcgtttt
acgttccacaagaagaatttgtatttctcattttatgtatcggaacgagcaagccgtcca
cgtgccattcaattcatcgatgaaactggtcatattctcgaagaaatcattttggtacaa
tcgagcaatatattcagcgtctatcagaatgcaaccggaaaagtttgcggcgtatggaga
cgcgttccacgcgaatatcgacgtcaattgcgcgacgaagagatgaatgttgtgttgtta
tggggttcaaaattacatgctgaactcgcattggctggcaaaatttcaaagtatccagca
ttatcaagtgaattgtttacatcgttgcttgaggcaccatctgacaaaggtgttgttctg
aaagagctaaatggagccggtggaacggctgttgtgtcaacaagcagcggtgcaacatca
tcgattcatttaacattagttttgaatggtttattccttaatgagagtgccgatgttccg
ctaaatgttcgcctcgaaatagccgataaaaagcaaaaagttcttcaagatacggtcgtt
gtaaaaaaatccaattatgactataatgttattgaattctcatcgccggtaacgacacaa
gatttacgatcattgactcgcggtaaattgaatttgattgtggaatcacgacgacgacca
gaaattcatattcaaggatcgattttaacgcgagcaacatgcgagatttatcaaacagtt
ttagcaccaacaacaaccgaatcgaaaacaacgaccagcggattagcatgggcttatatg
aatcgtgacggtgctcttgtttacaacatttacacggacgatttgaaattgcaagagagc
ccgctcatcacattggttgacgatagcgttaagcgtaaaactgatttagaagatttgaca
ccatcgctgagttttaacaatgcaatcggtgtacttgatcgaatgggtccacgagttttg
gaaccattgtatgcaaacaatttagccattaatattgccacggaaaatgaacagaattta
atacgaggacgattgattggaagacaattagccgatgcacgtgactcagaagaaccaatc
attttaaaacgtttggactcgaatgcaccggcacatctagttggtatggcatgggttgct
gttgataacgaatgtacacttcactatgaaatcacattgaacagttataatgcacaacag
ggccttgaattatacttggaggagaaaccacttgaggccattaatgcaccagttacgaca
aaaattttagaagaattcaaaggcgagtatttggaaggtttcgtgatgggaatgtcagca
tatgaactatcaaaattggagacaagcgtgtgttatttacaagttaaagctaaagagagt
ggcacacatttattgaagggtaaattgagatcggttaaaattccaattcaatgcacaatg
cccggaatcgatacgaatcgagttggtgatttaggcccaaatgatcataccgataataat
gtaccaaccgatccaaaatgctatcattcgggccgattttatgacgaaggcgaacaatgg
caaaatggtttggaaacgtgcagcatgtgcgcttgtatttacggtcgagtgaagtgcgat
aaactagaatgtccgccgttggattgcaaagagggtgaattacgaccaccgcgcaagggt
gaatgttgcccatcttgttcaccgaaagaaatggatatcaattcgaatgtaacacgtggt
tgtcgtttgggtgatcaattccatgcagctgggtcatcatggtatccatatcttccacca
aatggatttgatcgatgcgccacttgcacatgcaatccaatcacactggaagttaaatgt
ccacgcgtacaatgccccccgcttgcatgctcagacaaaattgcatatcgtccgaataaa
agcgcttgttgccggaaatgccccgaggtgaaagaagcaccagtggagaagaaggcacac
gatcccgaattgatgggtgatcaaggcacaaagaaaggtacaatcaaatcggtcgaagaa
attttatcacatggaggttgcaagatgacaaacaacttctatgaaaatggacatgaatgg
cacccaacaattccgtcgcacggcgaacaaaaatgcgttaaatgcagatgtaaagattca
atcataaaatgtgatcgcaagcgttgtgctcgtgcagcctgcaacaaaagtgcggcacga
aatcgtctaaatggactaacaccatcaccgctccatgaaaatgccgatgattgttgttta
tcacaatgtcgttcgcgacggcatcaaaagcaaaagcaacgtcagcaacgagaacgacaa
attgaccggcaacaacaaagatcccctggcaattcaaagagttga
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