Contarinia nasturtii (swede midge): 116343645
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Entry
116343645 CDS
T08003
Name
(RefSeq) ran-binding protein 16 isoform X1
KO
K18460
exportin-7
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116343645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116343645
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116343645
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_XPO7
XPO4
IBN_N
NLRX1_C
Motif
Other DBs
NCBI-GeneID:
116343645
NCBI-ProteinID:
XP_031627704
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MDNTMQEVIQLELMCKQMYEGENSTRNEAEKVLVAFQNSLDALPKCQLLLDRGQSSYSQL
LAATTLTKLIAKNAQGLSLQEIVDIRNYILNYLATRPNLESFVIQALVTVLAKITKYGWF
YCHKDEMVFRNIIEDVRKFLQGSVEHCMIGVQILSQLTCEMNHPEVDVNISYIKHRKTVY
SFRDTQLYDIYILSCTLLMTARDNCKTLNFMDEKQHGLINQILRLTKNCLSYDFIGTSND
ETTDDSSTIQIPTNWRPAFLDLNYLNLFFDLYHLLPSRLSSLALSTLVQITSVRRSLFSN
TERAKFLSNLVVNIKNILENSQGLSDPDNYHEFCRLLARLKTNYQLSELVVVECYPEVIQ
LIAKFTIQSLQMWQFAPNSIHYLLSLWQRMVASIPYVRAVEPHHLDAYTPEVTKAYITSR
LDSARVIIRDGLEDPLDDLAMVQQQLDQLSVIIRCEYDQTCNFVIHTFDQTASEYQELLN
NPVNNSEIAVREAQLTWLVYIIGAAIGGRLTFTANDEHDILDGDLVVRVLQLMRLTDSRL
PQCGCEKLELSMISFLDHIRKIYIIEQMQKMKIYKRLSELLGINDEPMLLSVINRKIITN
LKFWGHSEVIIRKTLNLLNELSVSYSWVRKLVKLEEIQFLLNNHTSEHFSFLGSNVAIAE
MRCRSMFYTSLGRLLMVDLGEDEERFYNFMSPLTNQFESIGSAIMDTSTYPSEEAKKALI
GLSRDLRGLTFSSSKKNAYMMFFDWIYPDYTPILIRAIELWPTDPQVTTPILKLFAELVQ
NRSQRLQFDISSPNGILLFREASKVICTYGNRIMNYDVPKNQLYALRLKGISICFTMLKA
ALSGNYVNFGVCKLYGDETLDNVLDVTTKLILTIPQTDLLVYPKLSQSYFLLLECLAQDH
MAFLSTLDPAIFLYIIKSISEGLAAEGMTNLTSSDATDTTICTGCCSILDNIVSHIFKQL
SIKAFPTKKMRRNVVNPDSDMFLKVIEMHPEILQGILSTIINIVMFEDCKNQWSLSRPLL
GLILLYEDYFRSMKENIIRSQPLDKQQTIAHWFDNLMENVERNLSMKNRDKFSQNLSLFR
RDVNETLKQANINSSNSTSGGSGGSSINDMIVS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggacaacacaatgcaggaggtgattcagttggaattgatgtgcaagcaaatgtacgag
ggtgaaaattcaacgcgaaacgaagccgaaaaggtgttagttgcattccaaaatagtcta
gatgcattgccaaaatgtcaattactattggatcgcggacaatcaagctattcacaattg
ctggcggcaacaacgctcacaaaattgattgcaaaaaatgcacagggattgtcactgcaa
gagatcgtcgacattcggaattacattcttaattatttagcaacacgaccgaatctagag
agttttgtcattcaagccttagtcactgtattggccaaaataacaaagtacggctggttt
tattgccataaagacgagatggtctttcgaaatattatcgaagatgtgcgaaaatttctt
cagggttcagttgagcactgcatgattggtgttcagattttgtcacaattgacttgtgag
atgaatcatcctgaggtcgatgtcaacatttcatatattaaacatagaaaaaccgtttat
tcatttcgagacacacaattgtatgacatttatattttgtcttgcacgcttttaatgact
gctcgcgataactgtaagacattgaattttatggacgaaaaacagcatggtctcatcaac
caaatacttcgtttgacgaaaaattgcttaagctacgattttatcggtacatcgaacgat
gaaacaaccgatgactcttcaacaatacagattccgaccaattggagaccagcatttctt
gacttgaattatttgaatttattctttgatttgtatcacttgttgccatcgcgtctatcc
agtttggcactgtccacactggtacaaataacatctgtacgacgatccttgttcagcaac
acggagagagcgaagtttctcagtaatttggtcgttaatattaagaacattctcgaaaat
tctcaaggacttagtgatccagataattaccatgaattttgtcgtttgttagcccgtctc
aaaaccaattaccaactaagtgaacttgttgttgttgaatgttaccctgaagttattcaa
cttattgcaaaatttaccattcaatcgttgcagatgtggcaatttgcaccaaatagcatc
cattatcttttgtctctttggcaaagaatggtcgcatcaattccttatgtacgtgccgtc
gagccacatcatttggatgcatatactcctgaagtgacaaaagcatacattacgtcacgc
ttagactcggcacgtgtcattattcgtgatggacttgaagatccacttgatgatttagcc
atggtgcagcagcaactcgatcaattgtctgtcatcattcggtgtgaatatgaccaaacg
tgtaactttgtgatacacacctttgatcaaacggccagtgaataccaagagctgctcaac
aatccggttaacaattccgaaattgcggttcgtgaagcacaattgacatggttagtttat
attattggagcggccataggtggaagattgacatttaccgccaatgatgagcatgatatt
ctcgatggcgatttagttgttagggtcttacaattaatgcgtttgaccgactcacgttta
ccacaatgtggctgtgaaaaactcgagttatcaatgatatcatttttggatcatattcga
aaaatttatattattgaacaaatgcagaagatgaaaatctacaaacgtctatccgaacta
ctgggcatcaatgatgaaccaatgttgttaagtgttatcaatcgtaaaattataacaaat
cttaaattctggggacattcggaagttatcatacgaaaaacgctgaatcttctgaacgaa
ctttccgtcagctatagctgggttcgcaaactggttaaattggaagaaattcagtttttg
ctcaacaatcacacgagtgaacacttttcatttttgggtagtaatgtggccatcgccgaa
atgagatgtcgcagtatgttttatacatcactcggtagattgcttatggttgatttggga
gaggacgaagaacgattctacaatttcatgtcaccattgacgaatcaatttgagtcgatt
ggcagtgccatcatggatacgagtacctacccaagcgaagaggcaaagaaggctctcatt
ggtttatcgcgtgatttgcgtggcctgactttttcgtcgagcaagaaaaacgcttacatg
atgttttttgattggatttatcccgattatacgccgattttaattcgagcaattgaactg
tggccaaccgatccacaagttacgacaccaattttaaagttgtttgccgaattggtacaa
aatcgttcgcagcgcttacaatttgatatttctagtccaaatggcatcctgctgttccgt
gaagcatcaaaggtcatctgcacatatggtaatcgaatcatgaactatgatgtaccaaaa
aatcaactgtacgcactgcgtttgaagggtatttcgatttgttttacaatgctcaaagcg
gcgttatcaggaaattatgtcaattttggtgtttgcaaattgtacggcgatgaaacgttg
gacaatgtattagacgtgacgaccaagcttatacttacaatcccacaaacggatttattg
gtgtatcctaaattgtcacaatcatatttcttgcttctggaatgtttggctcaagatcac
atggcatttctatctacactcgatccagcaatattcttatacataattaaaagtatatca
gagggtttggctgctgaaggtatgacgaatttaacttcttccgatgctacagatacgacc
atttgcacaggatgttgttcgattttggacaatatcgtttcacatatatttaagcaatta
tcgatcaaagcattcccaaccaaaaagatgcgccgcaatgtcgttaatccggacagtgat
atgttcttgaaagtgatcgaaatgcatccagagatattgcaaggaattttatcaacaatc
attaacattgtcatgtttgaagattgcaagaatcaatggtcactgtcacgtccattactc
ggattgattctgttgtatgaagactattttagatcaatgaaagagaacatcattcggtct
cagccactcgacaaacaacaaacgatagcccactggtttgataatttgatggaaaatgtt
gagcgaaatttatcaatgaaaaatcgtgataagtttagccaaaatctatcgctcttccgc
cgtgacgtgaatgaaacattgaaacaggccaatataaattcatccaattcgacatccggt
ggatccggtggtagttccattaacgacatgattgtatcatag
DBGET
integrated database retrieval system
