Contarinia nasturtii (swede midge): 116343725
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Entry
116343725 CDS
T08003
Name
(RefSeq) protein pelota
KO
K06965
protein pelota
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116343725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116343725
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116343725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
Motif
Other DBs
NCBI-GeneID:
116343725
NCBI-ProteinID:
XP_031627801
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MKLIAKSLDKGMQGSVVLVPEEPEDMWHAYNLISEDDYVRSTTIRKVQSETATGSSSSSR
IRTTLTICVESIDFDTQACVLRLKGRNVEENQYVKMGAYHTLDLELNRKFSLTKREWDTI
ALERVDMACDVTQNADLGAVIMQEGLAHVCLITSSMTLVRSKIDMNIPRKRKNNAKRHET
GLNKFYEAVLQGILRHINFDVVKCVLLASPGFVKDQFFEYLNQQAVKSDNKVLLENKSKF
VLVHASSGFKHSLKEVLQDPAVQAKLSDTKAASEVKALEQFYQILQAEPARAFYGKNHVV
KAAESQAIETLLISDNLFRCKEVNIRKEYVKLVEDVRDAGGEVKIFSSMHISGQQLAQLS
GIAAMLRFPMPELEDEDEDEDDNDTQDSDSDN
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaatcgctaagagtcttgataaaggcatgcaagggtcagtggtccttgtgccg
gaagaaccggaagatatgtggcatgcttacaatttaattagcgaagatgattatgtgcga
tcgaccacaatccgaaaagttcaaagtgaaacggcgacaggttcgtcaagtagcagtcga
atacgtacaactcttaccatttgtgtagaaagcattgattttgatacacaggcttgtgtg
ctacgtctcaaaggtcgaaatgtcgaggaaaatcaatatgtcaagatgggtgcctatcac
acattagatttggaattgaatcgtaaattttcactaacaaaacgtgaatgggacacaata
gccttggaacgcgttgatatggcttgtgatgtgacacaaaacgctgacttgggcgctgtt
atcatgcaggaaggattggctcatgtgtgtttaataacatcaagtatgacactggtacga
agtaaaatcgacatgaatataccaagaaaacggaaaaataatgctaaaagacacgaaact
ggtctgaataaattctatgaagccgtattacaaggcattttacgtcacatcaattttgat
gtcgtcaaatgtgtactactcgcatcgcccggatttgttaaagaccaattctttgaatat
ctcaatcaacaggctgttaaatctgacaataaggtgcttttggaaaataaaagtaaattt
gtactagttcatgcctcatcaggattcaagcattctttgaaagaagtgcttcaggatcct
gccgttcaagcgaaattgtccgatacaaaagcggcgtctgaagtaaaggctttggaacaa
ttttatcaaatactccaagctgaaccagccagagcattttacggcaaaaaccatgtggtt
aaggcagctgaatcacaagcaatcgaaacattactgatatcagacaatcttttccgatgt
aaggaagtgaacattcgaaaagagtatgtaaaattagtggaagacgttcgagatgcgggc
ggtgaagtgaagattttttcaagcatgcacatatcgggacagcaattggcacaactaagc
gggatagctgcaatgttacggtttccaatgcctgaactagaggatgaagatgaagacgaa
gatgataatgatacgcaagacagtgactctgacaattaa
DBGET
integrated database retrieval system