Contarinia nasturtii (swede midge): 116343733
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Entry
116343733 CDS
T08003
Name
(RefSeq) protein smoothened
KO
K06226
smoothened
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04341
Hedgehog signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09132 Signal transduction
04341 Hedgehog signaling pathway - fly
116343733
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cns04030
]
116343733
G protein-coupled receptors [BR:
cns04030
]
Frizzled / Smoothened family
116343733
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
116343733
NCBI-ProteinID:
XP_031627808
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MKFIVMSVIVWAFLCQVLCWNAVNAVFIETPSLVEKPEDEQLDLLSINGRDFLSNITKDI
SGKPWHDDREQNYIIRCLRPAKCERIQTNTCFGSKIPYKYTSGQLSEEGNQESNIKKLNQ
LEALRNVPKCWEVIQPFLCAVYLPKCTKSKGKEYVYLPSYEMCQATVEPCRVLYDTDFFP
SYLKCDEKVFPCKNCSNDVREMKFTPISSQCISPLVATDSAINYYPDIEGCGLQCRDPMY
TEGEHESVQTLIFWGATLCLVCNFYMIATFSIHDWRHSKHPAWNLFYISICLLCNWIGWM
LQFVPGHRDNIVCRRDGTLRYSEPSAGDNLACIIPFILVYYFSIAANIWFAIFTYHWYLQ
TKDRGSIRDRIDKESFYFHFIAWALPFILTVTIMVLSEVDGNSITGICFVGYRNRAIRTG
LVLVPVAILSFISVIFTFRGILNLNRIKRCSATSSEEASKLSSHILGMGIRTMLVIFFTS
SFFVFENYEVPNATMFAKSLTDFITCKIVESSPNDVTKCKIQNRPSVAVTQLGLLSLFGV
NLVITSWCWTTQALKTWKRFVRRKTGNELSEDDKMRPKHRIIADAYAKRKHMDGDISVSI
DHTLTDPAGLNFDVNNLNPAESDGMSSTLRNYMYNIINRRGAVELEPFTLEDKRNGVSYP
SSCAENSYNNSEVSVSVRHIEVESRRNSVDSQISLKMSETNFKATLESRPQKHKGINMKT
KKRQRNILYTKRTNRRASSSSIESQRITNQMQNFKYKYPKNGIPNVGENTTYGRRNAISA
RPGDILNELRSQFKSHDDDDDDQSIDEAQTMEINEPSNMLVPVDMGACSHQRVDSIDRLD
ASHDNQASLEQIIIGLLRNSDEKKIKHLLKMSHDYPNGVDKSHRNSTKRSKTQRNSHHKM
YEQQTNDESHPSIIKTEKDSGTSMSSSIDREMSQSQNSKRSCDVGIQANDFDIAGQRSRN
NYDQDEECTEMHHLLPNGRRRDAPTIVRKNIREFEMSSGPQKMQKVHDLLWP
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcatcgtaatgagcgttatagtttgggcatttttgtgtcaagtgctgtgttgg
aatgcggtgaatgctgttttcattgaaacgccatcgctagtcgaaaagcctgaagatgaa
caattggatttgttgtcgatcaatggtcgggactttctcagtaatatcacaaaagacata
agtggcaaaccatggcatgatgatcgggaacaaaattacataattcgctgtcttcgacct
gcaaaatgtgaacgaatacaaacaaatacatgttttggtagtaaaattccatataaatac
accagcggccaattgtcggaagaaggaaatcaagagtcaaatattaaaaaactaaaccaa
ctcgaagcattgcgaaatgttccaaagtgttgggaagtaattcagccatttttatgtgca
gtttatttgccaaaatgcacaaagagcaaaggcaaagaatatgtttatttgccatcatat
gaaatgtgccaagcaaccgttgaaccatgccgagttttgtacgataccgacttctttccg
agctatctcaagtgtgatgaaaaagtgttcccgtgcaaaaattgtagcaatgatgttcgc
gaaatgaaatttacaccaatttctagtcagtgtatttcaccattggttgcaactgattcg
gctatcaattattatccagatatcgaaggatgtggtcttcaatgtagagatcctatgtat
acggaaggtgagcatgaatcagtgcaaacgttgatcttttggggcgcaacactttgtctg
gtttgtaacttttacatgatcgcaacgttttcgattcatgattggcggcattcaaaacat
ccagcatggaatttattctacattagcatttgtttactgtgcaactggattgggtggatg
ttacaatttgtgcctggccatcgagataatattgtatgtcgtcgcgatggaacattacga
tattccgaaccgagtgccggcgacaatttggcctgtatcatccccttcattttggtctat
tacttttcgattgcggctaatatatggtttgccattttcacataccattggtacttacag
acaaaagatcgaggaagcattcgagatcgtatcgataaagagagtttctactttcatttc
atcgcctgggctctgcccttcattttaactgtcaccataatggtgctgagtgaagtggat
ggaaacagcattactgggatttgttttgttggttatcgaaatcgtgccattcgaaccgga
ttagtattggtgccagtggctattttatcatttatcagtgtgattttcacatttcgggga
atcttgaatttgaatcgcataaaacgttgtagtgctaccagcagcgaagaagcatcaaag
ctcagttcacacattttgggaatgggcatacgaacgatgctggtcatctttttcacttcg
tcatttttcgtcttcgaaaattatgaggtgcccaatgctacaatgttcgccaagagtttg
accgattttattacatgcaaaatagtggaaagcagcccaaatgacgtaaccaagtgtaaa
attcagaatcgtcctagtgttgccgtgactcaacttggcttgttgagtttattcggcgtg
aatttggtaataacgtcgtggtgctggacaacgcaagcgttgaagacgtggaaaagattc
gttagacgaaaaactggcaacgaactgagcgaagatgataaaatgcgtccaaagcatcga
attatcgctgatgcatatgccaagcgcaagcacatggatggtgacatttcagtttccatt
gatcatactctcaccgatccggctggcttaaacttcgatgtaaacaatttaaatccagcc
gaatcggatggaatgagctcaacactgagaaactatatgtacaatataatcaatcgaaga
ggtgccgtggaattggaacccttcacattggaagataaacgaaatggtgtatcatatccg
agctcatgtgccgaaaatagttataacaattcggaagtgagtgtgagtgtgcgacatatt
gaggttgagtcacgtcgcaactcagtggactcacaaatctcattgaaaatgtcggaaaca
aatttcaaagcaacactagagagccgaccgcaaaagcataaaggtatcaatatgaaaacg
aaaaaacgtcaacgtaacattttgtatacaaaacgaaccaatcgtcgagcgagcagttca
tcgattgaaagtcaacgaattacgaatcaaatgcaaaatttcaaatataaatatccgaaa
aatggaataccaaatgtgggtgaaaatacgacgtatggacgccgcaatgccatatcagcc
agaccgggtgacattttaaatgagttgagaagtcagtttaaatctcacgatgatgatgat
gatgaccagtcgattgatgaggcgcaaacgatggaaataaatgaaccatcaaatatgctt
gtaccagtagatatgggagcatgttcacatcaaagagtagacagcattgacagattggat
gcatcacatgataatcaagcatccctcgaacaaataatcattggattattaagaaatagc
gacgaaaaaaaaataaaacatttgctgaaaatgagccacgattatcccaatggtgtggat
aaaagtcatcgaaacagcacaaaacgctcgaaaacccaacgtaattcacatcacaaaatg
tatgaacaacagacaaacgatgaatcacatccatcgattataaaaactgagaaagattcg
ggtacgtcaatgtcatcatcgatagacagggagatgtctcaatctcaaaatagcaaacga
agttgtgatgttggcattcaggccaatgactttgatatcgcagggcaacgttcacgaaac
aattatgatcaggatgaggaatgcaccgaaatgcatcacttattgccaaatggcagaaga
agagatgcaccaactatcgttcggaaaaatataagagaattcgaaatgtcgagtggaccg
caaaaaatgcaaaaagtacatgatcttctgtggccataa
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