Contarinia nasturtii (swede midge): 116343735
Help
Entry
116343735 CDS
T08003
Name
(RefSeq) irregular chiasm C-roughest protein-like isoform X1
KO
K25874
Kirrel/Neph family protein
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cns04515
]
116343735
Cell adhesion molecules [BR:
cns04515
]
Immunoglobulin superfamily
Kirrel/Neph family
116343735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
C2-set_2
ig
V-set
PROL5-SMR
Marek_A
Motif
Other DBs
NCBI-GeneID:
116343735
NCBI-ProteinID:
XP_031627811
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MIKLISLNHICMELFGLLLLIISGASPFTTHLMEQQQFAMEPQDQVAVVGARVIFPCRVL
NKKGILQWTKDDFGLGTRRRLSAFERYSMVGSDEEGDYSLNIYPVTLEDDAKYQCQVGPG
QNGEPGIRSNYGILSVLKSPDPPKILQGDYMVTTEDREIELECVSENAKPAAEITWIDGF
GNVLTAGVEYIKEPSPDNRLSTAKSILKLKANVALHNKTIHCQAQNFAEKTYRSASIRLE
VKYAPKVRIVFVDGALDTGRIPVDNAVRLRCKADAYPNELTYQWYINDSMVIDATFSDLE
ISTVTRKHQNFVVKCEAQNVVGLSAATETLDVIYPPSFIERPQNVETEMGENITMSCHVD
SNPKADIIWVFDPIDRINFQPRVVGTSSELYVIASNETAGRYYCKAHSSGFPEISSEALI
ILKGPPKIISHPEQHPLDGETYEIECVAISVPKAKHVSWAFNGVLIDTDKDLGFSLRQDV
LYDRIKSTLRIVENHRKYFGTYSCTVINKYGSDTLNIVFSERTFNRIIVFKNLSTGKLPI
IIIASGSFAISLLIIAICFSICCCIRGSRNSGKKRELPPADIIPKVNQQPKVKTDSLKKK
NLSKTEIPVAVAVEPEYQESNSGSYSTTTTLSMNKTDFLGSKLLSIPPTIRYSGLQLPEG
FSDSTSQSITGSYVDFSRDFYSPSIQNANNFLIQSTLQRGETPTYV
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgataaaattaatttcattgaatcatatttgcatggaattatttgggcttctgcttcta
attatatcgggtgcaagcccattcacaacacatttgatggaacaacagcaatttgcaatg
gaacctcaagatcaagtggccgtcgttggtgcacgtgtaatttttccatgtcgcgtactc
aataaaaagggaattttacaatggactaaagacgattttgggctgggaacacgtagacgt
ttgtcagctttcgagcgatattccatggttggtagcgatgaagagggcgactattcattg
aatatttatccagtgacgctagaggatgacgcaaaatatcaatgtcaagttggaccggga
caaaatggtgagcccggcattcgttcgaactacggcattttaagtgttttaaaatcacct
gatccaccgaaaatattacaaggcgattatatggtgacaactgaagaccgtgaaattgaa
ttggaatgcgtgtcggaaaatgcaaagcccgcagctgagataacgtggattgatggtttt
ggaaatgttttgacagcgggcgttgaatatataaaggagccatcacctgataaccgacta
tcaacagccaaatccattttgaagttgaaagcaaatgtagcactccataacaaaacaatt
cactgtcaggcccaaaatttcgctgaaaaaacgtatcgttcagcaagcatacgattagag
gtgaaatatgcgccgaaggtgcgcatagtattcgtcgacggagccttggatactggacga
attccagttgataatgcggttcgattaagatgcaaagccgatgcataccccaatgagctg
acatatcaatggtatatcaacgacagtatggttatcgacgcgacgtttagtgatctggaa
atatcgaccgtaacgcgaaaacatcaaaattttgtcgtaaaatgtgaagcacaaaacgta
gttggattaagtgccgccacagagacattagacgtaatctatccaccaagctttatcgaa
cggccgcaaaatgttgaaacagagatgggtgaaaatataacaatgagctgtcacgtcgat
tcaaatccaaaggctgacataatttgggtgtttgatcccatcgatcgcattaattttcaa
cctcgagtggtgggtacatcttcggaattatatgtgattgcgtcaaatgaaacagctgga
cgttactattgcaaggcacatagcagtggttttccggagattagttcggaggcattgatc
atattgaaagggccaccgaaaataatatcacaccccgaacaacatccactcgatggtgaa
acatatgaaatcgaatgtgtggccatttcggtgccaaaggcaaaacatgtatcatgggca
tttaatggcgttttaatcgatactgacaaagatttgggattctcattacgacaagatgta
ctgtatgaccgtattaaatcaacgctacgcattgtagagaatcatcgtaaatacttcgga
acgtatagttgtacggtcattaataaatatggatcggatactcttaatattgttttcagc
gaacgtacttttaatcggatcatcgtttttaaaaatctttctacaggaaaattaccgatt
attataattgcatccggctcattcgctatctcgctgttaatcattgccatttgtttctca
atctgttgttgcattcgtggaagcagaaacagtggcaaaaaacgtgagcttccgccagcc
gacattataccaaaggtgaatcaacagccaaaggtgaaaacagattctttaaagaaaaag
aatctatcgaaaaccgaaatacctgtcgctgtcgcagttgagcctgaatatcaagaaagc
aattcgggttcatatagcacgacgacaacgctatcaatgaacaaaactgatttccttggc
agcaaattgctatcgattcctccaacaattaggtattctggtttgcagctgccggaaggt
ttcagcgattcaacaagtcaatcgataactggtagctatgtagatttttctcgcgatttt
tattcgccaagtatacaaaatgcaaacaatttcctcatacaaagcacattacaacgtgga
gagactccgacgtatgtgtaa
DBGET
integrated database retrieval system
