Contarinia nasturtii (swede midge): 116343821
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Entry
116343821 CDS
T08003
Name
(RefSeq) RNA-binding protein NOB1
KO
K11883
RNA-binding protein NOB1
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116343821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116343821
03051 Proteasome [BR:
cns03051
]
116343821
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
116343821
Proteasome [BR:
cns03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
116343821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Zn_ribbon_8
Zn_ribbon_NUD
Zn_Ribbon_1
BUD22
WRNPLPNID
Motif
Other DBs
NCBI-GeneID:
116343821
NCBI-ProteinID:
XP_031627937
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MPEHKFHCLVVDTTAFINNVSLQDHADYLITVPEVVKEIKNKRQLKRLCVLPYDLVVDEP
SPASVQHVIAFAKKTGDYLSLSSADIKVIALTYQLECELVGKDHLRDEPIVAKTIASKQK
PVELVDKTPLAGFYVPPQKESLEEKTRQNRELVAEKVEQEEKEAKENSEDDEKDSETEDQ
AEIAENAAGGVEISEQAEQTLDQLEEKFNKLNCGLVSESEADQILVSVKDDSKNDGDNEE
NDSEETEESETESEEDDDDESSWITPTNLQEMKSACSKEVVDDQKRARVACMSTDFAVQN
VLKQINLNIAALDGRIIKQMRTYILRCYACFKTTSIMTKLFCPNCGHKTLKRVAVSMDEN
GQQVIHINLRRPLTAKGKNQSIPRPRGGKHSSNPILFEDQPIPKQFPTRVARTKTNAMDE
DYIAGFSPFVLRDVDSKSALLRAKNGGNIKQWARNHAYRNMKRNSKK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcataaattccattgtttggtcgttgatacgactgctttcataaacaacgta
tcgctgcaggatcatgccgactacctaatcacagtgccagaagtggtgaaggaaatcaag
aataagcgtcaattgaagcgtttgtgtgttttgccgtatgatctagtagttgatgagcca
tctccagcatctgttcaacatgttattgcatttgctaagaaaactggtgattatttgagt
ctatcatcggccgatataaaggtgattgcattgacctatcaacttgaatgcgaattggtg
ggcaaagatcatttacgcgatgaaccaatcgtagcaaaaacgattgcatccaaacaaaaa
ccggttgaattggtggataaaacgccactggcaggtttttatgtgccaccgcagaaggaa
tcgcttgaagagaaaacgcgccagaatcgtgagctagtcgctgaaaaggtggagcaagag
gaaaaagaggcaaaagaaaatagtgaagatgatgaaaaagacagtgagacagaagatcaa
gctgaaatagctgaaaatgccgctggtggtgtcgaaatatcagaacaagccgaacaaaca
cttgatcagcttgaagaaaaattcaacaaattaaactgtggcttggtatccgaaagcgaa
gccgatcaaattcttgtttcagttaaagacgacagtaaaaacgatggtgataatgaagag
aacgatagcgaagagacggaagaaagcgagaccgagagcgaagaggatgatgatgatgag
agtagttggattacaccaacaaatttacaagaaatgaaaagtgcttgcagcaaagaagtg
gtcgatgaccaaaaacgagctcgagttgcttgtatgtcaactgatttcgctgtacagaat
gtactgaaacaaatcaatttgaatattgccgcattggatggccgcattatcaaacaaatg
cgaacttatattctgcgttgctatgcatgcttcaaaacaacaagcatcatgaccaaatta
ttctgtccgaattgcgggcacaaaacattgaaacgtgtcgctgtgagcatggatgagaat
ggtcaacaagtgattcacattaatttgcgtcgaccactcaccgccaagggtaaaaatcaa
agtattccacggccaagaggtggcaaacattcatcaaatccgattttgtttgaagatcaa
ccgattccaaaacaatttccaactcgtgtggcgcgcacaaaaacaaatgccatggacgaa
gattatattgcaggcttctcaccattcgtcctacgtgatgtcgactcaaagtcagcacta
ttgcgagctaaaaacggtggtaacattaaacaatgggctagaaatcatgcataccgaaat
atgaaacggaattcaaaaaaataa
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