KEGG   Contarinia nasturtii (swede midge): 116343821
Entry
116343821         CDS       T08003                                 
Name
(RefSeq) RNA-binding protein NOB1
  KO
K11883  RNA-binding protein NOB1
Organism
cns  Contarinia nasturtii (swede midge)
Pathway
cns03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cns00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    116343821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cns03009]
    116343821
   03051 Proteasome [BR:cns03051]
    116343821
Ribosome biogenesis [BR:cns03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    116343821
Proteasome [BR:cns03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    116343821
SSDB
Motif
Pfam: PIN_6 Zn_ribbon_NOB1 Zn_ribbon_8 Zn_ribbon_NUD Zn_Ribbon_1 BUD22 WRNPLPNID
Other DBs
NCBI-GeneID: 116343821
NCBI-ProteinID: XP_031627937
LinkDB
Position
Unknown
AA seq 467 aa
MPEHKFHCLVVDTTAFINNVSLQDHADYLITVPEVVKEIKNKRQLKRLCVLPYDLVVDEP
SPASVQHVIAFAKKTGDYLSLSSADIKVIALTYQLECELVGKDHLRDEPIVAKTIASKQK
PVELVDKTPLAGFYVPPQKESLEEKTRQNRELVAEKVEQEEKEAKENSEDDEKDSETEDQ
AEIAENAAGGVEISEQAEQTLDQLEEKFNKLNCGLVSESEADQILVSVKDDSKNDGDNEE
NDSEETEESETESEEDDDDESSWITPTNLQEMKSACSKEVVDDQKRARVACMSTDFAVQN
VLKQINLNIAALDGRIIKQMRTYILRCYACFKTTSIMTKLFCPNCGHKTLKRVAVSMDEN
GQQVIHINLRRPLTAKGKNQSIPRPRGGKHSSNPILFEDQPIPKQFPTRVARTKTNAMDE
DYIAGFSPFVLRDVDSKSALLRAKNGGNIKQWARNHAYRNMKRNSKK
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgccagagcataaattccattgtttggtcgttgatacgactgctttcataaacaacgta
tcgctgcaggatcatgccgactacctaatcacagtgccagaagtggtgaaggaaatcaag
aataagcgtcaattgaagcgtttgtgtgttttgccgtatgatctagtagttgatgagcca
tctccagcatctgttcaacatgttattgcatttgctaagaaaactggtgattatttgagt
ctatcatcggccgatataaaggtgattgcattgacctatcaacttgaatgcgaattggtg
ggcaaagatcatttacgcgatgaaccaatcgtagcaaaaacgattgcatccaaacaaaaa
ccggttgaattggtggataaaacgccactggcaggtttttatgtgccaccgcagaaggaa
tcgcttgaagagaaaacgcgccagaatcgtgagctagtcgctgaaaaggtggagcaagag
gaaaaagaggcaaaagaaaatagtgaagatgatgaaaaagacagtgagacagaagatcaa
gctgaaatagctgaaaatgccgctggtggtgtcgaaatatcagaacaagccgaacaaaca
cttgatcagcttgaagaaaaattcaacaaattaaactgtggcttggtatccgaaagcgaa
gccgatcaaattcttgtttcagttaaagacgacagtaaaaacgatggtgataatgaagag
aacgatagcgaagagacggaagaaagcgagaccgagagcgaagaggatgatgatgatgag
agtagttggattacaccaacaaatttacaagaaatgaaaagtgcttgcagcaaagaagtg
gtcgatgaccaaaaacgagctcgagttgcttgtatgtcaactgatttcgctgtacagaat
gtactgaaacaaatcaatttgaatattgccgcattggatggccgcattatcaaacaaatg
cgaacttatattctgcgttgctatgcatgcttcaaaacaacaagcatcatgaccaaatta
ttctgtccgaattgcgggcacaaaacattgaaacgtgtcgctgtgagcatggatgagaat
ggtcaacaagtgattcacattaatttgcgtcgaccactcaccgccaagggtaaaaatcaa
agtattccacggccaagaggtggcaaacattcatcaaatccgattttgtttgaagatcaa
ccgattccaaaacaatttccaactcgtgtggcgcgcacaaaaacaaatgccatggacgaa
gattatattgcaggcttctcaccattcgtcctacgtgatgtcgactcaaagtcagcacta
ttgcgagctaaaaacggtggtaacattaaacaatgggctagaaatcatgcataccgaaat
atgaaacggaattcaaaaaaataa

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