Contarinia nasturtii (swede midge): 116343842
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Entry
116343842 CDS
T08003
Name
(RefSeq) caprin homolog isoform X1
KO
K18743
caprin-1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116343842
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116343842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caprin-1_dimer
PNRC
Motif
Other DBs
NCBI-GeneID:
116343842
NCBI-ProteinID:
XP_031627972
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MPSAASVKVEKPPTTNISANNAVAATKEAVAQSENVDNSSPVRQISLIIEHKIRNLEKRK
SKLESYRDLEKTGKDLSTDKKIAILKYDEVAMTLEFAREFSKQIDKVVVSSEKDLKKKQK
KDESLKKQNETSKVREVLIIQDILNVLKDESVRNEFLAGTNGACKIEQDEFDLLDSFAAK
ILPKRSTESGSVSFKNSCQKAADILSLTVDGKQKEFEASTTYANIKTLLKNIQKSAYFEK
LNQPQQQAENRIELQENASEEISDVKSDDDAKTVITPEEIVVEETTVNVEAGKVNNQGES
GTIDYQEAPSASAVPVPTFTPQQPHVVAAPGINTQQNLKPLPQVPVAAGGSIPLSQVPPN
HQIHTGQLPSVRAVESAYFKQHQYIQPMARPLAEVLGTGNFFFLQDSELDSPDVPNNISA
HQNSERPPICQIGQQPQQQPLDPLPQSNLNPNNQLPLQRPEVPTTQINPMHNQPSQAHQN
QQVNATYWKSPGVSGIDTKSVGASAVDAKSTGVTATFNNQSFPLIHNPQSSSFPNVVPPP
NPQQVNTDHHPLSLHQQQQPHIPGFATPNAPIPIPAQIPTLNQSVPQQTTSPNANQMLVQ
QSQQFASASKFVNQTNLATTHQNITENNTHDLHANTADIKENEWKVDDIAHVTSKLNNTS
LDHSHKTDLKTTISNGNSAWRDSYTTNANKNSQESNEWNSVANENGQDDSNTWPSGGNQR
YQYRQGSGNYRSSASKSSFSKNAPNNYRGRSNGSYNNGNNSGNGVGNSRTNGNGNSSSFY
RNNDNTFYQNGSRADKSSENKSGGGGSDVKNFSANRYRGNPQRNSNNANSQSSNNKKNFN
FNARV
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgccgcgagtgttaaagtagagaaaccaccaactaccaacatttcagctaac
aatgctgtggctgctactaaagaagcggttgcacaaagcgaaaatgttgataatagttct
cccgtacgacaaatctcactaataatcgagcacaaaattcgaaatttggaaaaacgcaag
agcaaacttgagtcttaccgggacttggagaaaaccggcaaagatttgagcactgacaaa
aaaatcgcaattttgaagtacgatgaggtggcgatgacactggagtttgcccgtgaattt
tccaagcaaatcgataaagttgtcgtctcatcggaaaaggatctaaagaagaagcagaaa
aaggatgaatcacttaaaaaacaaaatgaaacatcgaaagtccgcgaagtattaattatt
caagacattttaaatgtactgaaggatgaatcagtacgcaatgaatttttggctggaacg
aatggtgcctgtaagatcgaacaagatgaattcgatctattggactcatttgccgctaag
attctaccgaaacgttcaaccgaatcgggtagcgtctcatttaaaaattcttgccaaaaa
gctgccgacattctatcgctcaccgttgatggcaagcaaaaggagtttgaagcatcgaca
acctatgcaaacatcaaaacccttttgaaaaacatccaaaagtcggcgtactttgagaaa
ctcaaccaaccccaacaacaagctgaaaaccgaattgaattgcaagaaaatgcttccgaa
gaaataagtgacgtcaaatctgacgatgatgctaagaccgtaattacgccagaggagatc
gttgtagaggaaacgactgttaatgttgaggctggaaaggtgaacaaccaaggcgaaagt
ggaacgatcgactatcaagaagctccatctgcgtccgctgtgcctgtaccaacattcaca
cctcaacaaccacatgtcgtcgccgcacccggaataaatacgcaacaaaatctcaaacca
cttccgcaagttcccgtggcagccggtggttcgattccattgtcgcaggttccaccaaat
catcaaatccatactgggcaattgccgagcgtacgggctgttgagagtgcatactttaaa
caacaccagtacatacaaccaatggctcgtccactagctgaagttttgggcacaggaaat
ttctttttccttcaggattcggagttagattctccggatgtaccaaataacatttcggct
catcaaaattcggaacgaccacctatatgtcaaattggacaacaacctcaacaacaaccg
ttagatccgcttccgcaatcgaatctgaacccaaacaaccaactgccgctgcagcgacct
gaggtaccaacaactcaaatcaatccaatgcacaatcaaccatcgcaggcacatcaaaat
cagcaggtaaacgcaacttattggaaatcgcctggggtgagcggtattgatactaaatcg
gtgggcgcttcagccgttgacgcaaaatctactggagtcactgctacatttaacaatcag
tcatttccattgatccacaatccacagtcttcttcgttcccaaatgttgtgccaccacca
aatccacaacaagtaaataccgatcatcatccattgtctttgcatcagcaacaacaaccc
cacatacccggatttgcaaccccaaacgctccgatcccaataccagctcaaattcccacg
ttgaatcagtcggtaccgcagcaaaccacatcgccaaatgcaaatcaaatgcttgtgcaa
cagtctcagcaatttgcatcagcatcgaaatttgtgaatcaaacaaaccttgcaaccact
catcaaaacattaccgaaaataatacacacgacttacacgctaacactgccgacatcaaa
gaaaacgaatggaaagttgatgacattgcgcacgttacatccaaactgaataacacctca
ttggaccactctcacaaaacggacctgaaaaccaccatcagcaatggaaatagtgcttgg
cgtgattcatatacgacaaatgcgaataaaaattcacaagagagcaatgaatggaatagt
gtggcgaatgaaaatggtcaagacgattcaaatacatggccaagcggtggaaatcagaga
tatcaatatcgtcaaggctctggcaattatcgttcatcagcatcaaaatcatcattctca
aaaaatgccccaaacaattatcgtggtcgttcaaatggttcttacaataatggtaacaat
tcgggaaatggcgttggaaattcacgaacaaatggcaatggtaattcttcatcgttttat
cgaaacaacgacaacactttttatcaaaatggatcgcgggccgataaatcgtcggaaaat
aagagtggcggcggtggttcagatgtaaagaatttctcagctaacagataccgcggtaat
ccacagcggaatagcaacaatgcaaatagccaaagttcaaacaacaaaaagaatttcaat
ttcaacgctcgagtgtaa
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