Contarinia nasturtii (swede midge): 116343868
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Entry
116343868 CDS
T08003
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116343868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116343868
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cns04147
]
116343868
Membrane trafficking [BR:
cns04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
116343868
Exosome [BR:
cns04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116343868
Exosomal proteins of colorectal cancer cells
116343868
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
CTD1
Motif
Other DBs
NCBI-GeneID:
116343868
NCBI-ProteinID:
XP_031628014
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MNRFEYAQAILKDDESFVAKHKSMKLYHGHQKTNFEDGEVVLTTHRLLWGRVGEIARGMV
VLSLNLKYVISLDEEVASSFVFGRKKRIIIMLSELQSDKAPGPMDDSTGETFIKLSGRNG
IEESFVQSLNETVSARIWETSEKSSNNETENTPVRRIKLRTGIVGIERNLQERQKQTDEN
ITLAFKDLNKLMTMAKDMVAISKVISSKIRERHGDISEDETVRFKSYLMSLGIDDPVTRD
SAASNSEYFQLLANQICAMLLDPIIEAGGMMSLADVYCRVNRARGLELLSPEDLLNACQM
LDGPIKLRKFPSGAMVLQIETHSDEIVSQETFEAVEKAKSITVEELAQLLSISLLLAQER
LLTAERAGKICRDDSIEGLRFYPNLFLTNAIE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgatttgaatacgctcaagcgatcttgaaagatgacgagtcattcgttgcaaaa
cataagagtatgaaattataccatggccatcaaaagacgaatttcgaagatggtgaagtg
gttcttactacacaccgtttattatggggtcgagtcggtgaaattgcccgtggaatggtt
gtgctaagtttgaatttgaaatatgtcatttcactcgacgaagaagtggccagttcgttt
gtgtttggtcgtaaaaagcgaatcataataatgctgagtgaattacaatcggacaaagca
ccgggcccgatggacgatagtactggcgaaacgtttataaagttgtccggccgaaatggc
attgaagagtcatttgtacaatcgttgaacgaaacagtgtcggctcgcatatgggaaaca
tcggaaaaatcatcaaacaatgaaaccgaaaatacgccggtacgtcgaataaaattgcga
acgggaattgtgggcattgaacgaaatctacaagagcgtcaaaagcaaaccgatgaaaat
attacgcttgcctttaaagatcttaataaattaatgaccatggccaaagatatggttgcc
atttcaaaagtgatcagttcgaaaattcgcgaacgtcacggtgatatatcggaagatgaa
acggttcgatttaaatcgtatctcatgagcttaggtatcgatgatccggtcacaagagat
agtgctgcaagcaattcagaatattttcaactattggcaaatcaaatttgtgcaatgtta
ctcgatccaattatcgaagcaggcggaatgatgtcattggctgatgtatattgtcgcgtc
aaccgtgcacgtggattggaattactttcgccggaagatcttttgaatgcatgccaaatg
ttagatggtccgattaaattgagaaaattcccaagtggtgcaatggtcttacagattgaa
acacacagcgatgaaatcgtttcgcaagaaacatttgaagcggtggaaaaggccaaatca
ataactgtcgaggaattagcacaacttctgagcatttcgttgttgttagcacaagaacgt
cttcttactgccgaaagagctggaaaaatttgccgtgatgattctattgaaggactacgt
ttttacccaaatctatttttaacaaatgcaattgaataa
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