Contarinia nasturtii (swede midge): 116343874
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Entry
116343874 CDS
T08003
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04080
Neuroactive ligand-receptor interaction
cns04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116343874
04082 Neuroactive ligand signaling
116343874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cns04040
]
116343874
Ion channels [BR:
cns04040
]
Ligand-gated channels
Glutamate (ionotropic)
116343874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Antifungal_pept
Herpes_UL73
Motif
Other DBs
NCBI-GeneID:
116343874
NCBI-ProteinID:
XP_031628023
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MKTSHILFVLISIIATTLAWRSQSSSGSSGIQIGERGPKRIGNSGDKERFKQENQNGKKE
ENTQQHFNIGLVLPHTSFGKREYQRAIASAVSSLQKMRDTKLPFLRDVDFTAKNVHFDMI
LLTPSPTTILDTMCKDFLQANVSAIIYLVNYETFGRSTASAQYFLQLASYLGIPVISWHA
DNSGLERTASQSRLQIQLAPSIEHQSAAMLSILERYKWHQFSIVTSQIAGHDDFVQAVRE
RVNVMQEHFKFTILNSIIVTRASDLMELVNSESRIMLLYCTKGEAADILQWADELKITGE
KYVWVVTQSVIENTQANNQFPVGMLGVHFDTSSQSVINEISTALKVYALGIQSYLNDPAN
AGRRLNTQSLSCEVEGKSRWETGEIFYRHLRNVSLDTDINKPNIEFTADGDLKNTELKIM
NLRPSGNSKSLVWEEIGTWKSWAQQKLDIRDIVWPGNSHAPPQGVPEKFHLKISFLEEPP
YISLSPPDPVSGKCLMERGVLCRIAAENDIADIDIGQAHRNGSFYQCCSGFCIDLIEKFA
EPLGFTYELVRVEDGKWGTLENGKWNGLIADLVNRRADMVLTSLMINAEREAAVDFSEPF
METGIAIVVNKRTGIISPTAFLEPFDTSSWMLVGIVAIQAATFMIFLFEWLSPSGFDMKL
SVQTKVPYRFSLLRTYWLVWAVLFQAAVHVDSPRGFTARFMTNVWAMFAVVFLAIYTANL
AAFMITREEFHEFTGLDDSRLARPFSQKPSYKFGTTIYSHTDSTISKYFKEMHNYMSQYN
KTTVNEGIAAVLNGGLDAFIYDGTVLDYLVSQDEDCRLLVVGSWYAMTGYGLAFSRNSKY
VNMFNRQLLEMRSNGDLERLRRYWMTGTCRPGKQEHKSSDPLALEQFLSAFLLLMAGILL
AALLLFLEHLYFKYFRKRLVKSDRGQCCALISLSMGKSLTFRGAVYEAQEILRNHRCTDP
VCDTHLWKVRHELDMARLRVRQLEKSMDSHGIKPPNLRLSSASDLLNHHFKERPPLLGNL
SLGGSAQDLYRWSLKTEIAEIETVL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgtcacacattttattcgttttgatatcgattatagcaacgaccttggcatgg
cggtcacaatcatcgtcaggctcgtcaggcattcaaattggtgaacgtggaccgaaacgc
ataggcaacagcggcgataaagaacgtttcaaacaagaaaaccaaaatgggaaaaaagag
gaaaatacacaacaacattttaatataggtttagttttaccgcacacgagtttcggaaag
cgtgaataccagcgtgcaattgcatcggctgtgtcgtcattacaaaaaatgcgtgacaca
aaattaccatttttacgtgatgttgattttactgcgaaaaatgttcatttcgacatgatt
ttgttaacaccgagtccaacaactatcctcgatacgatgtgcaaagattttctacaagca
aatgtatcagccattatttatttggtgaattacgaaacatttggacgaagcacagcatca
gcgcagtactttttacaattggccagctacttgggcattccagtgatatcatggcatgct
gataattcaggtttagagcgaacagcgtcacagtcacgattacaaattcaattggcccca
agcattgagcatcagagcgctgccatgttgagcatactcgaacgatataaatggcatcaa
ttttcaattgttacatcgcaaattgctggacacgatgatttcgtccaagcagtacgtgaa
cgagttaatgttatgcaggagcattttaagttcacaatattaaattcgattattgtaacg
cgagccagtgatttaatggaactagttaatagtgaatcgcgtatcatgctattgtattgc
acaaaaggagaagctgctgacattttacaatgggccgacgagcttaaaatcactggcgaa
aaatatgtttgggttgtcacacaatcggttatcgaaaatacacaagcaaacaatcaattt
ccggttggaatgttgggcgttcatttcgatacaagttcgcagtcagttatcaatgaaatt
tcgactgcactaaaagtgtatgctcttggtattcaaagttacttgaacgatccagcaaat
gctggacgccgattgaatacacaatctttgagctgcgaagttgaaggtaaatcacgatgg
gaaactggcgaaatattttatcgtcaccttcggaatgtgtcacttgacacggatattaat
aaaccaaatattgaattcactgctgatggtgatcttaaaaatactgaactcaaaattatg
aacttgagacccagtggcaatagcaaaagcttagtttgggaagagattggtacatggaaa
tcttgggcccaacaaaaattagatattcgagatatagtgtggccgggcaattcccatgca
ccaccacaaggcgttccggaaaaatttcatttgaagatttcgtttcttgaggaacctccg
tacataagcctctcgccgccggatccagtttctggaaaatgtttgatggaacgtggtgtt
ttgtgccgaatcgctgcagaaaatgatatagcagatatcgatatagggcaagctcatcgg
aatggaagtttttatcaatgctgttcaggcttttgtatcgatttgattgaaaagtttgcc
gaaccacttggtttcacttatgaattggtgagagtagaggatggaaaatggggaactctc
gaaaatggaaaatggaatggattgattgccgatttagtaaatagaagggctgatatggtt
ctaacatcattaatgataaatgccgaacgtgaggctgcggttgacttcagtgaacctttc
atggaaactggcatcgctatcgttgtgaataaacgcactggcatcatttcacccacagca
tttttagaaccgttcgacacatcgagttggatgttggttggaattgtagcaatccaagcg
gctacatttatgatcttccttttcgaatggttgtcaccgagcggttttgatatgaaatta
tcggtgcaaacgaaggtaccgtatcgattttcattgcttcggacgtattggttggtttgg
gcggttttgtttcaagcagctgtacatgttgatagtccccgtggatttacggcgcgtttt
atgacgaatgtttgggcgatgtttgctgttgtcttccttgctatttacactgccaatttg
gcggcgtttatgattactcgtgaagaattccatgagttcactggtttagatgattcacgt
ttggcaagaccattttcgcaaaaaccatcatacaaatttggtaccacaatatacagtcac
acggattcaacgatttccaaatactttaaggagatgcataattatatgtcacagtacaat
aaaacgacggtgaacgaaggcatagcggctgtgctcaatggaggtcttgatgcattcatt
tacgatggaaccgttttggattatctcgtatcacaggatgaagattgtcgactactggtt
gtgggtagttggtacgcgatgactgggtacggtctggcatttagtagaaattcaaaatac
gtgaacatgtttaatcgtcaattgcttgagatgcgatcgaatggtgatctggagagattg
aggcgatattggatgacaggcacgtgtcgtccaggaaaacaagagcacaaatcatccgat
cctctagccttagaacagtttttatccgcatttttactgttgatggccggcattttgctt
gcagctttacttttgtttttggaacatctatatttcaaatacttccgaaagcgtttagtg
aaatcggatcgaggccaatgttgtgctctcatttcactctcaatgggaaaatcattgaca
ttcagaggtgctgtatatgaggcgcaagaaatcctgcgaaatcatcgatgcacagatcca
gtttgcgatacacatttgtggaaggtacgccacgaactcgatatggcccgattgagagta
cgacaactggaaaaatcaatggattcacatggcattaagccaccaaatttgaggctttct
tccgcatctgatctactgaatcatcacttcaaagaacgtccaccgctattgggtaacttg
agccttggtggtagcgcacaggatctatatagatggtcactgaaaacagaaattgccgaa
atcgaaacggttttgtaa
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integrated database retrieval system
