Contarinia nasturtii (swede midge): 116343883
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Entry
116343883 CDS
T08003
Name
(RefSeq) POU domain protein 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116343883
03021 Transcription machinery [BR:
cns03021
]
116343883
Transcription factors [BR:
cns03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116343883
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
116343883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HypF_C_2
TPR_25
Motif
Other DBs
NCBI-GeneID:
116343883
NCBI-ProteinID:
XP_031628042
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MPLLVAQRNTHQGVAVLDRCHRATSNKLLLEHQQPLDFTMSKYKPTSRHQLYRQIYSAED
SLQYDQKMQDQDMQWHRPVTTLSASSSMTTQSTHNKPKQMNSSIPFRELLLQQQQSKLLA
ADVNATNASGGGGGGGNNHGGIATTANIENAANAIISSAVEQDRIALATHFQERDRLILQ
HQQHQLQRKQKHKQLDEHEKPFSSSNRIRDFVIGGSGGGGVVDRVTNIASGKTSDLNRLS
KSPSPVPSHDDADSNDSCCPRVKSESPELCHDERPTNLHLITDQSRNTPSPPPIPATNMA
SALAALQSQLQLSPLLMPNHMGLGNMAGMSPQELTALTQAFQQMQQVSLQQQLQSYMELL
HTSSLGQQKNANAANAQVQAAAQFFQVAQAAQQLQALQKQQQIKNQASAAMSNSPVQSPS
GSPGIPTPTSILVGNNQTTPPNMNANLNVGGILTPSTPGSGTHTPQMQKHSAMPRALEPS
PEEPADLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKN
MCKLKPLLQKWLEDADNSISNPGGSIFGASTLSNPLTTPETIGRRRKKRTSIETSVRGAL
EKEFHANPKPTSEEIARLADRLYMEKEVVRVWFCNRRQKEKRINPPGSESPTGAGSVSGN
LSWLPALSPNLQQHYSQISSLKSE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgttggtagcacaaagaaacacacaccaaggagtagcggtattagatcgttgc
catcgtgccactagtaacaaactattattggaacatcaacaaccgctcgattttactatg
tccaaatataaaccaacgtcacgtcatcaattgtatcgtcaaatctatagcgccgaagat
tcattgcaatacgatcaaaaaatgcaagatcaagatatgcagtggcaccgcccggtgaca
actctatcagcctcatcatcgatgacaacgcaatcgacacacaataaaccgaagcaaatg
aacagtagcataccatttagagagttgctactacaacagcagcaaagtaaattattggcc
gccgatgtgaatgcaacaaatgccagcggcggcggcggtggtggtggcaataaccatggt
ggcatcgcgaccacagcaaacattgagaatgcggccaatgcaatcatatcgtcggccgtt
gaacaggatcgcattgcgttggcaacacattttcaagagcgcgatcgattgatactacag
caccagcaacatcaattgcaacgaaagcaaaagcataaacaattggacgaacacgaaaag
ccctttagctctagtaatcgcatcagagactttgtgataggaggcagcggcggcggtggt
gttgttgatcgagtcacaaatatcgcttctgggaaaacgtccgatttgaatcgattatcc
aaatccccatctccggtaccttcacacgatgatgcagacagtaacgattcatgttgcccg
cgtgttaaatcggaatcaccagaactttgccatgatgagcgacccacaaatcttcatttg
attaccgaccaatcgagaaacacaccatcgccacctccaattccagcaacaaatatggca
tctgcattagccgcattacaaagccaattgcaattgagcccgttgttaatgccaaatcat
atgggtctcggcaacatggccggtatgtcaccgcaagaattgaccgcactcacacaagca
ttccaacaaatgcaacaagtttcgttgcaacaacaactacaaagctatatggaactgttg
cataccagtagcttgggccaacagaaaaatgcaaacgctgcaaatgcacaagttcaagct
gccgcacaatttttccaggtggcacaagcagctcagcaattgcaagcattacaaaagcaa
caacaaataaaaaaccaagcatcagctgcaatgtcaaattctccggtgcaaagtccgtcg
ggtagtcccggcattccaacgccgacatcaattttagtgggaaacaatcagacgacaccg
cccaatatgaatgcaaatctaaatgtcggtggcattttgacaccgtcaacgcctggctct
ggaacgcatacaccacaaatgcaaaaacattcggcaatgccacgtgcattagaaccgtca
ccagaagagccagccgatttagaagaattagaacaatttgcaaagacattcaagcaacgt
cgaatcaaattgggtttcacacaaggcgatgttggcctggccatgggcaaactatacgga
aatgatttttcacaaacaaccatatcaaggtttgaagctctaaacctaagctttaaaaat
atgtgcaaacttaagccattgctgcaaaaatggcttgaagatgccgataacagcatttcc
aatccgggcggcagcatatttggtgcaagtacactaagtaatccgttgacaacacccgaa
acgattggccggcgacgcaagaagcgtacatcaattgaaacatcggtgcgcggtgcattg
gaaaaggaattccatgcaaatccaaagccaacaagtgaagaaatagccagattagccgat
cgattgtatatggaaaaggaggtagttcgtgtgtggttttgtaatcgtcgccaaaaagaa
aaacgaatcaatccaccgggttcagagagtccaactggtgctggcagtgtgagtggcaat
ctatcatggttgccggctctatcgcccaatttgcaacaacattattcgcaaatctccagc
ctcaaatcagaatga
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