Contarinia nasturtii (swede midge): 116343921
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Entry
116343921 CDS
T08003
Name
(RefSeq) nuclear pore complex protein Nup214-like
KO
K14317
nuclear pore complex protein Nup214
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116343921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116343921
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116343921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
Beta-prop_EML_2
DUF2390
Motif
Other DBs
NCBI-GeneID:
116343921
NCBI-ProteinID:
XP_031628108
LinkDB
All DBs
Position
Unknown
AA seq
1604 aa
AA seq
DB search
MALQEAPVAIDVTDIQFKVHSKYQLFNVNASTPNYNGIDLLAAASNFGLVIVGRPTAQEI
QVLRLKDVTENKESPTIPTRIINLPGEPYMLAVSCDHSMLSVCYTVNGTTFIDIYAVQSF
LSTNVQCILSKIMVSNANSVKVNQILWNPVIANTMALCLSDGTLTSYLIKANSFEFNALD
KAENARCACWSPKGKQIVVAFPNGKLAQYKPDLKLAKAIPCATQIFAGPFYPIAIQWLST
YQFAVVFVENKEEANQSLFIINTSKTAPPTYINYYDITFSQTGPRAPQVFLVHILQWNIL
LMASSNGTEIGILGTTESGENPLWKQYTFIDEGRAELPLTADKQDTFPIGLALDTGCTHQ
LTIGENLIPVMPMLHILSTHGFILSFDMLNFQPTRVDICSPPQNISDQSGLGFFKQNATA
GAAQKIMTTPPSQQPNAARTSSSNDFHVNNLTFAIPETGATSTPAKQPQSMQTKPTFGLQ
TTEAQQPKPAMSSLFGAKQTIGFGSSGLGGPKELPKPFGQPTMQPAPTPASASPSVIPQN
SAVKVSSEASKPFLTVQSTYKPVPQAAKNPTSSIVSNSENDALLRKLIKEEIEAFDTEIR
AALNRSKNVQINICGKEELSKLIKNIDEMQEITTQATESTESIKVDVNSLRLTLYEMHAM
MAEAQSKIEEFNKIGKTSDGNLAANQTHRRLINKLQNQLAQNQARFDVFSKQLDANWSAH
LQNQRENDKARMRIPTLENVYQTLEQQHQILMKEKAKISKIKSKIGGRDSSPSKIKYSYS
KTDNLKMNSLVDSVLSLTISDQIRSEQKPLNASKLDALRKATLSSRKINVIKPSRPDRQG
INSEIIIEKKLAHAKAQKEKENLKKAELEAERARQEELTKQKDLAKPKPLLPTPTTQPVA
AAAAAAAAPFLSKPKEVIDKQPLTVTPALPSSTGSSLFGSKQLFGSSQIGTTTVPAKSFD
TKSIFSSDQPKSQLSFGISAEKPPAQKSEPTTNQSTGLSKTVSFNTAATAPSGFAFGTKP
EPTETVPSSTKSTGFSFGASTPQAFGSMSQMKSDGSMPSVSVSQPKPALLQTPTSTNKEP
TLLRNAPIIATGVNISPKQTTKTPLLATPPNIQPQQTNVQSTVTTTSSPFKFNMGNTFAA
TTTPDKSKSDKENAPIAVSVTSAPNTSSIGNFSFLSGLSSTSTPPTKSNTPSTVSTVQAA
NVSSPISVASNPTVVSSTPSSIGFSFAKASTEPSIFGGTQTGATTTTTSTVATTAANVIT
SSSDVGSIFKGFNICKPNVVDTSNAGKSPFGGNETKWSLSGLSGGDASSPTTTSASVFGS
IAQSPSTSAQASPFVGKSITTSASTLPTTSTTTSIFGAKSPDTTPSQPAAGTNVFGAKSV
ESASVSFGGFGISSTPPSSAASPSAASAGNLFGSVPAPTSAGNIFGGAIGSSNTSTASIF
GGSTPTSPQAGFGSSVFSNANTTTNIFGGAASTSSSTSASMFGGTATNPSSGGSLFGGSG
FSSPQQPSSGFGLSAIAAQSNHTFGSSATFGSAPAFGSPTQKGGGFGTFANTNPIPSFTT
PPKSNSLFESLGSSDNAMTFGNLAQNAAAAPKQFSGGTSFSSWR
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atggcattgcaagaagcgccagttgcaattgatgtcacggacatccaatttaaagttcac
agcaaatatcaactattcaatgtgaatgcaagcacaccaaattacaatggcattgattta
ttggcagcggccagtaactttggtctggttatcgttggaagaccaacagcgcaagaaata
caagttctccgattgaaagatgtcactgagaacaaagaatctccaacgattcctacacga
atcataaacctacctggtgaaccgtatatgttggctgttagctgtgatcacagtatgctt
tcagtgtgctatacagttaatgggaccacatttatcgacatatatgcagtgcaatcattt
ttgtcgacgaatgttcaatgtatactgtcaaaaattatggtatcaaatgcgaacagcgta
aaagtgaatcagatcttgtggaatccagtcattgcgaacacaatggccctttgtcttagc
gacgggacgctcacatcatatctcattaaagcgaatagctttgaattcaatgcattagat
aaagcagaaaatgcacgttgtgcttgttggagcccaaaaggaaagcagattgttgtcgct
tttccaaatggaaaattggcacaatacaaacccgatttgaagctagcaaaagcaatacca
tgtgcaacacaaatttttgcgggaccattttatccaattgctatacaatggctttcgaca
tatcaattcgctgtggtgtttgtcgagaacaaagaagaagcaaaccaatcattattcata
attaacacgtcaaaaacggcgccaccgacttatatcaactactatgacattacgttcagt
cagacagggccaagagcaccacaagtttttcttgttcatattttacaatggaatattttg
ttaatggcctcatcaaatggaactgaaattggaattttgggcacgaccgaatcaggagag
aatccactttggaaacaatatacatttattgacgaaggccgtgctgaacttccattgaca
gcagataaacaagatacattcccaattgggttggcattagacactggttgcacacatcag
ctgactattggtgaaaatctaattcccgtcatgccaatgctacacattctatccacacat
ggattcatcttatcctttgatatgttaaattttcaaccgacccgagtcgatatttgttca
ccaccccaaaatatatcggatcaatctggattaggatttttcaaacaaaatgcaactgct
ggagcggctcaaaaaataatgacaactccaccatcacaacaaccaaatgctgctagaaca
tcatcgtcaaatgattttcatgtgaataatctaacgtttgccataccagaaacgggtgca
acttcaacgccagcaaaacaaccacaatccatgcaaacaaaaccaacatttggcttacaa
acgaccgaagctcagcagccgaagccagcgatgtctagtctattcggtgcaaagcaaaca
attggttttggatcaagtggtttgggtggtccgaaagaactgccaaaaccttttggccaa
ccaacaatgcagccagcaccaacaccagcatccgcatcgccatcggttattccacaaaat
agtgcggtaaaagtgtcatcagaagcaagcaaaccatttttaacggttcaatcgacctac
aaaccagtaccacaggctgcaaaaaatcctacatcgagcattgtatcaaattcagaaaat
gacgcacttttacgaaagcttattaaagaagagatcgaagcgtttgacactgaaattcgt
gctgcgcttaatcgctcgaaaaatgttcaaatcaatatttgcggcaaagaagaactcagc
aaattgataaaaaatatcgatgaaatgcaagagatcaccacacaagccacagaaagtacc
gaatcaattaaggttgacgtaaattcattgcgattgacattgtatgaaatgcatgcaatg
atggcagaagcacagagcaaaattgaagaattcaataagattggaaaaacaagtgatgga
aatttagcagcaaatcaaacacatcgtagacttatcaataagctacaaaatcaattggca
caaaatcaagcaagatttgatgtattcagtaagcaactcgatgccaactggtcagcacat
ttgcaaaatcaacgcgaaaatgataaggcaagaatgcgcataccaacacttgaaaatgtt
taccaaacgttggaacaacagcatcagatactgatgaaagaaaaagccaagatcagtaag
atcaaatcgaagattggcggtcgtgattcttctccaagtaaaattaaatattcgtattca
aaaactgacaatctgaaaatgaattctcttgtcgattcggtgctatcgttaacgattagc
gatcaaatcagaagtgagcaaaaaccattgaacgcctccaaattggatgcattgcgtaaa
gcaacactatccagtcgaaagattaatgtcattaaaccttcacgaccagatcgacaggga
ataaattccgagataataatcgagaaaaagctggctcacgccaaagctcaaaaggagaag
gagaatttgaaaaaagccgaacttgaagctgaacgtgcacgccaagaagaattgacaaag
caaaaggatttggccaagccgaaaccattattgccaacacccacaacacaaccggtggcc
gcagcggctgcagcagctgcagcaccatttttgtcaaaaccaaaagaagttattgacaag
caaccgctaacggtgacaccggcattgccatcgtcgacaggttcatcgttgtttggttca
aaacagttgttcggctcatctcaaattggcacgactacagtacctgcaaaaagtttcgat
accaagtcaattttcagtagtgatcaaccaaaatcgcagctatcgtttggcattagtgcg
gaaaaaccaccagcacaaaaatccgaaccaacaacaaaccaaagtacaggtttgagtaaa
actgtttcattcaatacggccgcaacggctccaagtggatttgcgtttgggacaaagcca
gaaccaacagaaactgtgcccagttcaacaaaatcgactggattctcatttggcgccagt
acaccacaggcctttggttcaatgtctcaaatgaaatcggacggttcaatgccatctgtt
tcagtgagccagccaaagcccgcattattacaaacaccaacctcgacgaacaaagaacca
acactacttagaaatgcaccaattattgcaaccggcgtgaatatttcaccaaaacaaaca
acaaaaacacctttattggcaacaccgccaaatattcaaccgcaacaaacaaacgttcaa
tcaacagtgacaacaacttcaagcccattcaaatttaacatgggcaatacgtttgctgca
actacgacacccgataaatcgaaatcagacaaagaaaatgcaccgattgctgtaagcgtt
acttcagcaccgaacacaagttcaattggaaacttttcatttttatctggactctcaagc
acatcaacaccaccgacaaaatcaaacacaccatcgaccgtatcaacagtacaagcagcc
aatgtttcatcgccaatttcagtggcatcaaatccaactgtggtatcatcaacaccaagt
tcgatcggattcagttttgccaaagcaagcactgaaccatcaatatttggtggcactcaa
acaggcgcaacaacaacgacaacaagcacagtagcaactactgctgccaatgtgattact
agttcatcggatgttggctcaattttcaaaggatttaacatttgcaaaccaaatgtggtg
gacacgtcaaatgctggaaagagcccattcggcggtaatgaaacaaaatggtcgttaagc
ggacttagcggaggtgatgcatcttcaccaacgactacaagtgcctctgtttttggatcg
attgcacaatcaccgtcaacatcggctcaggccagcccatttgtcggtaaatcaatcaca
accagtgcaagtacattaccaacaactagtactacaacgagtatatttggtgcaaagtca
cccgatacaacgccatctcagccagccgctggtacaaatgtgtttggcgcgaaatcggtt
gaaagtgcatcggtatcatttggtggttttggaatatcctcgactccaccatcatcagca
gctagcccatctgctgcatcggccggaaatctatttggttccgttcctgcaccaacgtca
gctggaaatatctttggcggcgccattggtagcagcaataccagtacagcatcaatcttt
ggcggatcaacaccaacctcaccacaagctggattcggttcgtctgtcttcagcaatgca
aacaccaccaccaatatatttggcggtgctgcaagtacttcatcatcaacatctgcttca
atgttcggcggtacggcaacaaatccttcgtcgggtggttcactttttggtggttctggt
ttcagttcaccgcaacagccatcaagtggttttggtttgagcgctattgctgcgcaatcg
aatcatacatttggatcatcggcaacatttggatcggcgccagcatttggcagtccaaca
cagaaaggaggcggtttcggtacatttgccaatacaaacccaattccatcattcacaacg
ccaccaaaatcaaactcactgtttgaaagtcttggctcatctgataatgcaatgacgttt
ggtaatttagcacaaaatgcagcggccgcaccgaaacaattttctggcggaacatcattt
tcaagttggcgttaa
DBGET
integrated database retrieval system
