Contarinia nasturtii (swede midge): 116343950
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Entry
116343950 CDS
T08003
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116343950
Membrane trafficking [BR:
cns04131
]
Protein recycling
Others
EARP complex
116343950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Sec8_N
Motif
Other DBs
NCBI-GeneID:
116343950
NCBI-ProteinID:
XP_031628142
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MDEIKHKFRDFLDKHQNRNLKIPQMGFTDNYTKKKLSSTVSDTNKRKSSVNEVQSTTDES
ILLNICAIAAVTADDGDDEFAKRQTLLIPDQEIFDSTEPIYFQENVDTGIYELNKFIEGD
MDEESVQRAMMVLKQQHKVISKKVLQNILEKQNSCNSETKSIQEADVMLQQSLLECKKAR
SYLSCAKKNLTTTNLQILAMYKKREAMQKMLRTLYKLKKLKSTEIQLQKLLDTQNYSGAI
SLLLECKRLAAENSQYVCVAALAQKLQDTLLMTELQLDTVLGDVPHSFDVKTYSNLQDAY
RLLGKSMTAIDQLHMNFISTIHTQAFTVLKEFVERNGEEKQKCLFEELCENISSERFIPC
LIKLCKSFWCILVCYYQVALWHHNTRPPKLIAERDAESEIEQNTYTQQKFKTGYNRIWND
IQSKLAVFLSTSPTLHTLKYEQFIQVLSIVQRLRKVGMEFCNEPSTLLIESMKSQSVQFF
ERYHKSSLDEIRLFLDNEAWMPIHSFSNLIQLQEFNAVKSSLQRFLRRDKMDSSSDPLST
GTRMSPSKRLAERKKSYENQLADENLSNHSQEDCNSSVYGSCGYFLRFSEKSSPFDGGFD
VTMLEEDILAGIADESCYFSEESEEDNQLNEVNANVKSDSNANVEDTDTALTPTSNMTVN
NSSLNVLRCIGRYLQMCKLLHSISPQIVKCMMELIEFYIYVVHKLFASDLSLSSDNLYTF
NLRDQLNRIAAEIVPKVSNWRSEMSIIQQDLNDPDTSYGLLSRIVGVESAITLVQQFAQI
REYLEHLLQPNDNRFLAAFFDETNVNLQELRKPIYMCVAAKVNDLDGILASMAKVKWDIN
HVNVEHSTYVNNMNRGLQLFAMRLEEIETMLSIPKQPIWDCVAHVMTHTLVEGYSNAKKC
SPGGRALMQLDFAHFMSILELLSGLKFPHHHRYVDGYIKTYYLPKDLLETWIYEEKAKRT
YSTKQLAALITCTCSNDKKMRQKLMAMLEQDGNISIDLNDSRASDGRPNY
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatcaagcacaaatttcgagactttctcgataaacatcagaatcgaaattta
aagattccacaaatgggatttaccgataattacacaaagaaaaaattgtcgtcaacagta
agcgatacaaataaacgtaaatcaagtgtaaacgaggtgcaaagtacaacggatgaatca
attcttttgaacatatgtgcgattgccgctgtcacagcagacgatggcgatgatgaattt
gctaagcgacaaactttactcattcccgaccaagaaattttcgattccaccgagcccatt
tattttcaagaaaacgtcgacactggcatttatgagcttaataaattcatcgaaggtgat
atggacgaagagtctgtgcaacgtgcaatgatggtgctaaagcaacagcacaaagttatc
tcgaagaaagtccttcaaaatatactcgagaagcaaaattcatgcaatagcgaaacaaaa
tcaatccaagaagcagatgtgatgctccagcaatcattgttggaatgtaaaaaagcccgt
tcatacttgagttgtgcgaaaaaaaatctaaccaccaccaatttacaaatattggccatg
tacaaaaagcgagaagcaatgcaaaaaatgctacgaactttgtacaaattgaaaaaatta
aaatccaccgaaattcaattgcaaaaattgttggacacacaaaattattccggtgcaatt
tcattgttattggaatgtaaacgattggcagctgaaaatagtcaatatgtttgcgttgct
gcattggcacaaaagctgcaagacacattgctgatgactgaactacaattggacacagtg
ctcggtgatgtaccgcacagttttgatgtgaagacctattcgaatctacaggacgcatat
cgtttgctgggaaaatcaatgacagccattgatcaattacacatgaatttcatatcaacc
attcatacacaagcctttactgtactcaaggagtttgtcgaacgcaatggtgaggaaaag
caaaaatgtctctttgaagaattgtgtgagaatatttcatccgaacggttcattccgtgt
ttgataaaattgtgcaaatcattttggtgcattctggtatgttactatcaagtggcactt
tggcatcataacacccgaccaccgaagttaatcgccgaacgggatgccgaatcggaaatc
gaacaaaatacgtacacacaacaaaaatttaaaactggctacaatcgcatttggaacgac
attcaatcaaaactggcggtgtttttatcgactagcccaacactgcatacattaaaatac
gaacaatttattcaggtgctttcgatagtgcaacgtttacgaaaagttggtatggaattt
tgcaatgaaccatcaacattgctgatcgaatcgatgaaatcgcagagtgtacagtttttt
gaacgttatcacaagtcttcattggatgaaattcgtttgtttcttgacaacgaggcatgg
atgccgattcattcattcagcaatttgattcaattacaagagtttaatgcggttaaaagt
tcgttacaacgattcctacgaagagataagatggattcatcatcggatccactgtcgact
ggtactcgaatgtctccatcaaagcgactcgccgaacgaaagaagagctacgaaaatcaa
ttggccgatgaaaatttatcgaatcattcacaagaagattgcaatagttcagtgtatggt
tcgtgcggttacttcttacgattctcggagaagagttcaccgtttgacggtggttttgat
gtaacgatgctcgaagaggatattttagctggcattgccgatgaatcgtgctacttttcc
gaagaaagcgaagaagataatcagttgaatgaagtgaatgcaaatgtgaaaagtgattcc
aatgcaaatgtagaagatacagacacagcattaacaccgacctcaaatatgaccgtgaac
aattccagtttgaatgttttacgatgtattggtcgttatctacaaatgtgcaaactactc
cattcgatttcaccgcaaatcgtaaaatgtatgatggaattgattgaattctatatttat
gtggtgcataaattgttcgcatcagatttatcgttgtccagtgacaatttgtacacgttc
aacttaagagatcaattgaatcgcattgcagctgaaattgtgccgaaagtgagcaactgg
cgatcagaaatgtccattattcaacaagatttgaatgatccagacacaagctatggcctt
ctgtctcgtattgtcggtgttgaaagtgcaattacgttagtacaacaattcgcccaaatt
cgtgaatatttggaacatttgctgcaaccgaatgataatcgctttttggcagcgtttttc
gatgaaacaaacgtcaatttgcaagagctgaggaaaccaatttatatgtgcgtcgcggcc
aaggttaacgatttggatggtatactcgcgtctatggccaaggtcaagtgggatataaat
catgtgaatgtcgagcacagtacttatgtcaataacatgaatcgaggtcttcaactgttt
gcaatgcgtttggaagagattgagacaatgttgtccattccaaaacagcccatctgggac
tgtgttgctcatgttatgacacacacattggttgaaggctattcaaatgcgaaaaaatgt
tcaccaggtggtcgcgccttaatgcaattggattttgcacattttatgtcaattttggaa
ctattgtcgggattaaaatttccacatcatcatcgctatgtagatggttacataaaaact
tattatttgccgaaagatttgttggaaacttggatctatgaggagaaggccaagcgcacc
tattcaacaaaacaattggccgcattgataacgtgtacatgctcgaacgataagaaaatg
cgtcaaaaattgatggcgatgctcgaacaggatgggaacatttcaattgatttgaacgac
tcccgtgcatcagatggtcgtccaaactactaa
DBGET
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