Contarinia nasturtii (swede midge): 116344026 Help Entry 116344026         CDS       T08003                                  Name (RefSeq) helicase POLQ-like   KO K19178   POLQ-like helicase [EC:5.6.2.4] Organism cns  Contarinia nasturtii (swede midge) Brite KEGG Orthology (KO) [BR:cns00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cns03400]     116344026 Enzymes [BR:cns01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      116344026 DNA repair and recombination proteins [BR:cns03400]  Eukaryotic type   Other factors with a suspected DNA repair function    Helicases     116344026 SSDB OrthologParalogGFIT Motif Pfam:  POLQ_helical DEAD HTH_61 Helicase_C ResIII DUF7898 Cdd1 HHH_5 DNA_pol_lambd_f DUF4332 Motif Other DBs NCBI-GeneID:  116344026 NCBI-ProteinID:  XP_031628246 LinkDB All DBs Position Unknown AA seq 1185 aa AA seqDB search MEFKKPKTLKRYSDEGPNSPLNRKKCKLLSTTIATPEPRKKETDPFDDNFSQFFRSQFIR QISDAETSIIQKSKGTHNTSMSDYNFTQIDGLSQFLDETQFERSITSGQRCITDESSVID INEPNNEFETDKNENWQFTSQFEKEPLDGEENEPIEYKEDFVEERDHGDNGDKDPDSIDF MIQSSQAFLKELSVLQTNISSICNDTINASKFDTQDFLNPDQCQFEVFKSHVTESQYMHR KRPNEQSISEIIPRATDKKVFLGPSTELNTETIEDQLLAEMVLTTQALAKSTELLEDQLL EGINENDFLDDSEQLNECIDPDSSALNIFSDEDDKENHQNATKHNESIGSKRVSHNTVTT INRSETLPVTAAKYCSMGPFFGLPLKVKKLIRNFKNIDDLYDWQKECLQLPAIEQKKNLI YALPTSGGKTLVSEILIFREILCRQKSCIFILPYVSIVQEKVWSLSPFALELGFLIEEYA AGKGTVPPRKRRKKKSVYIATIEKALVMFDSLIEAGRVDEIGLVIIDELHIIGESGRGAT LEALLTKIQYVKAGIQIVGMSATIGNLPELAEFLDADVYQKDFRPVELREYIKCGSDLVE LKKDADCIQNAFVPERTISFNYKADALKKDPDHVAGLVSEVIPTKSCLIFCSTKKNCESL TKLLCTMLPKKFTEHKIAERENLIKAIENDMGSVICPILGRSIMCGIAYHHSGLTTDERR HLEEAFRCGVLCVICCTSTLAAGVNLPAKRVIIRSPYVGREFITLSKYKQMVGRAGRAGF GESGESILLCNYKDNQRVCELLCSPMDEVISQMPNSDSRALEAMILSAIGLNIATTQAEL QKLVARTMFSIQSNRFDDKDAKTLTNSIIVKLIRSKAVTTDSNTKPEFTNPVPSSSQSLH ETTFSTEIDLSQRKRLVLKSSTRLQVEMLGKSSFKSGIDFNRTKIVYTDLQGAQKSLVLL DYFHLLYIVTPYDEYNPPPMPDRNVFYKKYYELDQNQLHTAKIIGIAESTVIKLMSGQAI KPEHERVIKKFFMTMVLNELWHLKPVSDAANSFGIDRGIAQNLMGMAAIEASCLLKFCEE LEEFWAFRELFKNLSQRLSNICTVELVPLMQLPSVKMGRAKQLYNAGYKKIEDVARAKPK ELVDNIEHMTNRLANQLVSAAKVMLLEKLENLQEEAQECMEVYLS NT seq 3558 nt NT seq  +upstreamnt  +downstreamnt atggagtttaagaagccgaaaactctgaagcgatacagtgatgaaggcccgaattcaccg ttgaatagaaaaaagtgcaaattactgtcaacgacaatcgcaacaccggaaccacgcaaa aaggaaaccgatcctttcgacgataatttttcgcaattttttcggtcacaattcattcga caaatttctgatgccgaaacgtcgattattcaaaaatcaaaaggcactcacaatacgtct atgagtgattataatttcacacaaattgatggattgtcgcaatttttggatgaaactcaa ttcgaaagatcaattacatccggtcaaagatgcataacggatgaatccagtgtcatcgat ataaatgaaccaaataatgaattcgaaacggacaaaaatgaaaattggcaattcacatca cagttcgaaaaagaaccacttgatggtgaagaaaatgagccaatcgaatacaaagaagat ttcgtagaggaacgggatcatggtgacaatggcgataaagatccggattccattgatttt atgatacaatctagtcaagcatttctgaaagaactgtcagtgttgcaaacgaacatcagt tcaatttgcaatgacacaataaatgcgagcaaatttgatacgcaagactttttgaatccg gaccaatgccaattcgaagtgttcaaaagtcatgtaaccgaatcacagtacatgcatcgc aaacgaccgaacgaacaatcgatttctgagattatacccagagctacagacaagaaagtt tttctcggcccatcgacagagctaaatacagagacgatcgaagatcaattgttagccgaa atggtactcactacacaagcgctggctaaaagcacagaattactcgaagatcaattactg gagggaatcaatgagaatgattttttggacgattcggagcaactaaatgaatgcattgac ccggattcaagtgcgttgaacattttttccgatgaagatgacaaagaaaatcatcaaaat gcaacgaaacacaacgaatcaatcggttccaaaagagtttcacacaacacagttacaacg attaatcgatcagaaacgctgccagtcaccgctgccaaatactgttcaatgggtcctttt tttgggttgccgttgaaagtaaagaagctaatcagaaatttcaaaaacattgacgattta tatgattggcaaaaggaatgccttcaattgcctgccattgaacagaagaagaatcttatc tacgccctgccaacatccggcggaaaaacattggtgtcggaaattttgatatttcgcgaa attttgtgtcgccaaaagagttgcatattcattctgccatatgtttcgattgttcaagag aaggtatggtcattgtcaccatttgcattggaattaggatttctgattgaagaatacgca gccggcaaaggaactgtaccgccacgtaaacgacgcaagaagaaatcagtgtatattgca acgattgaaaaagcgctcgtcatgttcgacagtctaattgaagcaggccgagttgatgaa attggacttgtgattatcgatgagttgcatataattggagaatcgggcagaggtgccact ttggaggctctactcacaaaaattcaatatgtcaaggctggcatacaaattgtgggaatg agtgcgaccatcggaaatctacccgaattggctgaatttttggatgctgatgtctaccaa aaggactttcgaccggttgagttgcgtgaatacattaaatgcggatcggatttggttgaa ctgaaaaaagatgccgattgcattcaaaatgcatttgtaccggagagaacgatctcattc aattacaaagcagatgcattgaaaaaagatccagatcatgttgccggcttggtgagtgaa gtgataccaaccaagtcatgtttaatcttttgctcgacgaagaaaaactgtgaaagtctc accaaactactgtgtaccatgctcccgaaaaagttcaccgaacacaaaattgccgaacga gaaaatttgataaaagcgattgaaaatgatatgggcagtgtaatatgtccaattcttggc cgcagcatcatgtgtggcattgcctatcatcattctggcttgaccaccgacgaacgtcgt cacttggaggaggcatttcggtgtggtgttttatgcgtaatttgctgcacatctacactg gcggcgggtgtgaatttgccggccaaacgcgtcatcattcgatcgccctatgtggggaga gagtttattaccctcagcaaatacaaacagatggtaggtcgtgctggtcgagccggattt ggtgagagtggtgaaagcattttattatgtaattacaaggataaccaaagagtttgtgag ctgttatgctcaccaatggatgaggtaattagtcaaatgccaaatagtgattcacgagca ttggaagcgatgattctaagtgcaattggactaaatatcgcaacaactcaagccgaattg caaaaacttgtcgctcgtactatgtttagtattcaatcgaatcggttcgatgacaaagac gcgaaaactctgacaaatagcattattgtaaaactcatccgatcaaaagcagtcacaacc gactcaaataccaagcctgaattcacaaaccccgttccatcatcatctcaaagtctacat gagacaacctttagcacagaaattgatctaagccaaagaaaacggctagttttgaaatcg tcgacacgattacaggtcgaaatgctcggtaaatcgtcattcaaatccggaattgatttt aatcgaacgaaaattgtctacaccgatctacaaggtgcacaaaaaagccttgttttactc gactattttcatttgttgtatatcgttactccgtatgacgaatacaatccaccgcccatg ccggatcgaaatgtgttttacaaaaagtattacgaacttgaccagaatcagttgcacacc gccaaaatcataggcattgccgagtcgactgtgattaaattaatgtcgggacaagcgatt aagcccgaacatgagcgtgtcataaagaaatttttcatgacaatggtgttgaatgaactt tggcacctcaaaccggtgtctgatgctgcaaattcgtttggcattgatcgcgggattgcg caaaatctcatgggtatggctgcaatcgaggcaagttgcctgctcaagttctgcgaggaa cttgaagaattttgggcatttcgagaactcttcaaaaatttgtcgcaaagactgagcaat atctgtacagtagaactagttccactaatgcaactgccctccgttaaaatgggacgtgcg aagcaactgtataatgccggatacaagaaaatcgaggatgttgcaagagcaaaaccaaaa gaattggtggataatattgaacacatgacaaatcgactggcaaatcagctcgtctccgca gcaaaggtgatgctgttagaaaaactggaaaacttacaggaggaggcacaagaatgcatg gaagtttacctcagttaa

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