Contarinia nasturtii (swede midge): 116344082
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Entry
116344082 CDS
T08003
Name
(RefSeq) extensin isoform X1
Organism
cns
Contarinia nasturtii (swede midge)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
116344082
NCBI-ProteinID:
XP_031628331
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MSLAYGQQQQTPQAAQQPPIGAAPNQQQHRAMPPNRGPAQGPPPPSPAHIQKILDENCSL
IQTIQEFQHAGKSHECMSYHQTLHRNLVYLAQLADSTQNVNQILPPPHVLQSSMGQQIPP
MHHPSNEGGNQPPGGPQNPNQQPPIGGPYNHMQHQMPLPNSSHMQQQQQQQQQQQQQQQQ
QQGQQHPGQSHPSAPQHGPQHPGPQHPGQQHPGPQHPGQQQHPISNQQPPPPQQNDTAGP
AGQPGAGPQPNYRNAGPPTSVPQSQAQPQQPPVQSHPPLSHAQQQPPQPPQNDTAAGPPQ
QNFRNAPPPNAIPHSQPQQQPPHSQPPIQSHPTIPHSVANTPHSQAPPMPMSTTPQPTAQ
QQQQPTVAAPTTQPQGPPTQAPNQPPQQPPSQQHPSSQRPNAVPPSSQAPTVPVSQASQP
PVAQQQQGPGPQAQPPNQQQPPQPGQQQAQPYRGYQQPQHYGYGPPPQGQGYQPNSYPPA
MPPYGPQGYAPNAAPQVYHHGMPPSTTHQPGYPPPPGNQPMYGPHSQNMYPQNAPPPMNY
YGGPNPAYPNPYPPPPQQYQPPAPGYPPGSQQGQPIPPPTHHQPAANPPVVNSIPTSAAN
PNQTTSPPNTSNGSQAPTIGGGPPPPVTGAPQQTPVTGAQQPPAQPPASGKAMPPNSQPM
SMAPPHPNMPPPPQNSQPPAGYQPPGPMPPPVSGAHSQPNYTQPPQPQVQNSTAPNAQLP
PPVGQNIYSQQYQGPPQGPYAPGGPNYPATHAGYHQQNYHPAQNYQAYRPPPGPPAPGAY
TGYPGYGQPQQ
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcatatggacaacaacaacaaacgcctcaagcggcacaacagccaccgatt
ggtgcagcaccgaatcaacagcaacatcgtgcaatgccgccaaatcgaggtcccgcacaa
ggaccaccaccgccaagtccggctcacattcaaaaaattctcgacgaaaattgtagtctc
attcaaaccattcaagaatttcaacatgctggcaaaagccatgaatgtatgtcttatcat
cagacactgcaccgtaatctcgtttatttagcacaacttgcggattcaacacaaaatgta
aatcaaattctaccaccaccacatgttttgcaatcttcgatgggacaacaaattccaccg
atgcatcatccatcaaatgaaggtggcaatcaaccaccaggcggaccacaaaatccaaat
caacaaccaccaattgggggtccatacaatcacatgcaacatcaaatgccattgccaaat
tcatcgcacatgcaacaacaacaacagcagcagcagcaacagcaacaacaacaacaacag
caacagggacagcaacatcctggccagagccatccatcggcaccgcaacatggtccacag
catccaggacctcaacatcctggccaacagcatccaggtccacaacatcctggccaacaa
caacatccaatctcaaatcagcagccaccgcctcctcaacaaaacgatactgcgggacca
gctggtcaacctggtgcggggccacagccaaactatcgaaatgctggtccaccgacttcc
gttcctcaatctcaagctcaaccccaacagccaccagttcaatcacatccaccgttgtcg
catgcccaacagcaaccaccacaaccgccacaaaatgatacggctgctggaccaccgcag
cagaatttccgaaacgcaccaccgccaaatgcaattccacactctcagccccaacaacaa
ccgccacattctcaaccgccaattcaatcgcatccaacgataccacattcggttgccaat
acaccacattcgcaagcaccaccaatgccaatgtcaactacaccccaacctacagctcaa
caacagcaacaaccaacagttgcagctcctacgacacagccccaaggtccaccaacacag
gcaccaaatcagccaccacaacaaccaccaagtcaacagcatccaagctctcaacggccc
aacgctgttccaccaagctcacaggcaccgaccgttccagtttcgcaagcatcacaacca
ccggttgcacaacaacaacaaggtccagggccacaagctcaacctccaaatcagcaacaa
cctcctcagccaggtcaacaacaagctcaaccctatcgtggatatcaacagcctcagcat
tacggttatggtccaccacctcaagggcaaggttatcaaccgaatagctatccaccagcc
atgccaccgtatggaccacaaggttatgcaccgaacgcagcgcctcaggtttatcaccac
ggaatgccaccgtcaacaacacatcaacctggttatccaccaccacctggtaatcagcca
atgtatggaccccattcgcaaaatatgtatccacaaaatgcaccgccgccaatgaactac
tatggtggcccaaacccggcttatcccaatccatatccaccgccaccacaacaatatcaa
ccaccagcacctggatatccgccaggttctcaacaaggacaaccaattccaccgccaaca
caccatcaacctgcagctaatcctccagtggtaaattcaataccaacgtcggctgcaaat
ccaaatcaaacaacatcgccgccaaacacttcaaatggcagtcaagcaccaactatcgga
ggaggaccaccaccaccagttacaggggcaccacaacaaaccccagtaaccggcgcacag
cagccaccagctcaaccgccagcttctggtaaagcaatgcctcccaattctcaaccaatg
tcaatggctccgccgcatccaaatatgccgcctccaccacaaaacagtcaaccgccagct
ggttatcagccaccagggccaatgccaccaccagtatcaggagctcattcacagccaaac
tatactcagcctcctcagccccaagtacagaacagtacagcgccaaatgctcaattgccg
ccaccagttggtcaaaatatctattcgcaacaatatcaaggtccaccacaaggtccctat
gcaccaggtggccccaattatccggccacacatgcaggttatcatcaacaaaactatcat
ccggctcaaaactatcaagcatacaggcctccacctggtccacctgctcctggtgcttac
acgggctacccaggttacggtcaaccacaacaataa
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