Contarinia nasturtii (swede midge): 116344203 Help Entry 116344203         CDS       T08003                                  Name (RefSeq) negative elongation factor D   KO K15181   negative elongation factor C/D Organism cns  Contarinia nasturtii (swede midge) Pathway cns03250   Viral life cycle - HIV-1 Brite KEGG Orthology (KO) [BR:cns00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03250 Viral life cycle - HIV-1     116344203  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cns03021]     116344203 Transcription machinery [BR:cns03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     NELF complex      116344203 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TH1 Motif Other DBs NCBI-GeneID:  116344203 NCBI-ProteinID:  XP_031628505 LinkDB All DBs Position Unknown AA seq 585 aa AA seqDB search MDKSFEMKIDEELVDDGWGRHKVDDEMEHTDEPMENPQEVIDECLSKFCTSDYIMEPGIF TQLKRYFQAGGTPEQVINQLSQNYTAVAQMANLLAEWLILAGVCVTDVQAMVENHLKDMI LRTFDPKKADTIFTEEGETPAWLTEMVEHHTWRSLIYRLAEEYPDCLMLNFTIKLISDAG FQSEITSISTAAQQIEVYSRVLKTSIIKFLTNPDDVQRNIEECARMVCHGQHTYVYSQVL IQVLSQEPKGGFNMKRLSQEITKYALQNNHNVTPITMTLNGSAAYPQACQALTSMLSRNT LNPADITVLFRNYSASDSPPIDLIRNPQFLDLLVDSLFRTGVKINPEHKSKYIYLLAYAA SVCETYTKKGNKRNINKDELKGTMQAIEKVHGICNVNLGSTELIAELQTLYECIRFPVVG VGVIRWVENTVTDHSYFKLSTDSCPMHLAILDEVANVHLSLHQQILKLLIKLFESKQDEL EILVQLELRKMLLDRMINLLTRGCVVPVVKYIKQCCQKGDTDTSLIRYFVTEVLETITHP YSPEFVQLFLPMVENEEIMGSMRGEGDNDPVSEFIVHCKAHYMTV NT seq 1758 nt NT seq  +upstreamnt  +downstreamnt atggataaaagttttgagatgaagattgacgaagaactcgtcgatgatggctggggacgg cacaaggtggacgatgaaatggaacatacggatgagcccatggaaaatccacaagaagtc attgacgaatgtttgtcaaagttttgcacatcggattatattatggagccgggcattttt acacaactcaaaagatattttcaagccggcggcactccagaacaagttattaatcaactg tcacaaaactatacggccgttgctcaaatggccaatttattagccgaatggttaattttg gccggtgtttgtgttacagatgtacaagctatggtggaaaatcacttgaaagacatgatt ttacgtacattcgatccgaaaaaagccgataccattttcaccgaagagggagagacacca gcctggttgaccgaaatggttgaacatcacacgtggcgttcattaatttatcgtttagcc gaagagtatccagactgtttgatgctgaattttacgataaaattgatatcagatgctgga tttcaaagtgaaatcacttccatatcaacggctgcacaacaaatcgaagtttattcacgt gtactcaaaacatctataataaaattcctaacaaatccagacgatgtacagagaaatatc gaagaatgcgcaagaatggtgtgccatggccaacacacgtatgtgtatagtcaggtgttg attcaagtattgtctcaggaaccaaaaggtggattcaatatgaaacgcttatctcaggaa attaccaaatatgcacttcaaaataaccacaatgtgacaccaatcacaatgactttgaat ggttcggcagcatatccacaagcatgtcaggcgttaacatcaatgttatcgcgaaataca ttaaatccagccgacataaccgttttgtttcgaaattattcggcatccgattcgccacca attgatttaattcgaaatccacaatttttggatcttttggttgactcactgtttcgcacc ggtgtcaaaatcaatccagagcacaaaagcaaatacatttatttgttggcatatgcggcc agtgtgtgcgaaacatacacaaaaaagggcaataaacgaaatatcaataaagatgaattg aagggcaccatgcaagccattgagaaagtgcacggaatatgcaacgttaatctcggctca acggaattaattgccgaattgcaaacactgtacgagtgtattcgatttccagttgttggt gttggtgttattcgttgggttgaaaatacggtcaccgatcattcatatttcaaactgtcc accgacagttgtcccatgcatttagccatactggacgaagtggccaacgttcatttgtcg cttcatcagcaaatcctaaaacttctcatcaaattattcgaatcgaaacaagatgaattg gaaattttggtgcagttggaattgagaaaaatgcttttggatcgtatgataaatctactg acgcggggttgtgttgtgcctgttgttaagtacatcaaacaatgctgccagaaaggcgac acagacacatcactcattcgatattttgtaaccgaggttcttgagacgataactcatcca tattcgccggaatttgtgcaactgtttttacccatggtggaaaatgaagaaattatgggc tcaatgagaggcgaaggagacaatgatcctgtttcagagttcattgttcattgcaaggcc cactacatgactgtgtag

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