Contarinia nasturtii (swede midge): 116344366
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Entry
116344366 CDS
T08003
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03013
Nucleocytoplasmic transport
cns03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116344366
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116344366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116344366
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116344366
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
116344366
NCBI-ProteinID:
XP_031628723
LinkDB
All DBs
Position
Unknown
AA seq
1614 aa
AA seq
DB search
MDENDSPQNRSNDEAELSKSFDENSIIGKMKVGVSRILPNSLSKWLSPKVDVTNTRRRRH
EEIDSDEDNVAAIRRNSPPTTITTDSRYQTTPQLSAPPPNKKKKTFTEFLNRNTYDLFST
TTTPSIGERNNIVSSTLIDDVSHSRNVKQFNRYSTLENGQHATAAAAGIASASNAYADES
PRENDRYNNDEASSSQNRDKPTNLFTVNNDSSVVNFSAHLQRAKSLFTNRSYLSPRLKNY
RMRNPRSSLYRSTSSLCDNNSVSSNASSAMSSPFYNGQTTFGGASATSRRMSAATTADIQ
MHHRPKVPTNLVTSRSTSSLNTIGGTSSSASMSTTAKRILDVMSKYNTPLTEVRRISNAL
PSIAETTAINKRKSILELEMTSTTNDNEKSKRTLLKPNTPYNRPFGRNPVESTLITELHV
PSMPELLQLKKFATNTVKIRDIANKSDNILNRPVSSVAAEFKLSTTTTKSGSEIDKRAKA
DIDVSNNNKFVNNKNDAMSTKMSSSANDANKEHRNKIRNNLTKRNLGKRAADDDAMPEPV
NLPNISLVLDKKAEIKFSEPLKLPNATDQKFNIGNNALDNGPQIGIPFKFKSSNTNTISA
SATKECKRTNGNTSENLKKFDISPTKPALSTSLSSSSTAASFNTYISADLADKSQQARKI
SRESTSVYRFSEPIIVKTTAQNSFGKQYNSFGDISTNYKFSEPIYVTDDTSNELLKNDTS
KTFGNFKFDPKQIKGVPSDSGIADTQSSFGSNFSKSTVKSTLTSEFGKSTPSFGAQVKED
DTFKSLVAKQKQGKWSCKDCSVSNELTVDKCVCCGSAKINEGTTIATVKSTQSQPAAAAV
DDVFKSIVAKQKQSKWECNDCMTQNNQTESKCLCCGGANPNASSTNVTDSKPVPIKPSYS
FGTLPSSSSSTSNTSAASNQPIDSVFKSIVDKQKSTWKCSACLNANEVTKSKCACCEQSR
DVTKGATTSGTVPAKSQISFGNSSTFAPVKSGFSFGSNADTAVGATSSSSSSFPFGNLAA
AKTMPAAPFSFGNLKNSESVTKTNTSINDGKTETEEAKGSSVQKTPEKAPATIAPFSFGK
PPVLPSTSKVETTAPKVEAASTTPDSIFKSIVDKQKSSSWECSTCMAKNSNNDVKCMCCE
TPKDGSASKDQIKKEFSLESSQKFVFGTQSSNLFSFGSKQDNKNSIQIGTSSSSTSTPTT
SLSSTTTETPTASSSTSNLFGSSQAPTVSFTANKPSTTASQQASVFGGFTFGSSSVASPI
FGSKPSKDETDTGTSSTSNTKSITVLDNILVKPAASTNGPTESTPAPFVFGQGFATTAST
TTDDPAKAQKRPNSESSDNNVLSKFPATTPAALSAGNSFMFGQTQNTNTFSNTNTFSAIA
SNPTSNLAQVSNTTQTTTPTTQNTSTFGFGAPKPTSTNAFTNVQPSFFNATNNAASSTPA
ASPFGGSGSNANASNAFPVFGGNAFSSPSSSSQQAPPNTAQPVFGSSIFAPPAATQPTLG
GFKAGSTFGSSTPALGTSSLNTAAQPQATPGLFGASNNNQSEPPKPGGFNFSLNTPPTFN
FGQQNTQQANVPFQFGAPAEAPNMFAAQPGNAAAIQQRRKIRPIRRVNRPSTQF
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaacgattcaccgcaaaatcggagcaacgatgaagctgaattatccaaatcg
tttgatgaaaattcaatcataggaaaaatgaaagttggcgtatcgagaatattgccaaat
tcattatccaagtggctgtcaccaaaggtagatgttaccaatactcgacgtcgtcgacac
gaggaaatcgattcggatgaggacaatgtggctgccattcgtagaaattctccgccaacc
accattacaacagatagtcgatatcaaacaacaccacaattatccgcaccgccgccaaat
aaaaagaagaaaacatttaccgaatttttgaatcgaaacacatatgatttgttctcaaca
accaccacaccgtcaataggcgaacgaaacaatatcgtttcgtcaacgttgattgacgat
gtgtctcatagtagaaatgtaaaacaattcaatcgatattcaacacttgaaaatggtcaa
catgccaccgcagccgccgccggtattgcttctgcttcgaatgcctatgctgatgaatca
ccgcgtgaaaatgatcgttataacaacgatgaagcgtcatcatcgcaaaaccgtgataaa
ccaacaaatttattcaccgtcaataacgattcgtctgtggtgaatttttccgcacattta
caacgcgccaaatcactatttacaaatcgttcgtatttatcaccacgtcttaaaaattat
cgtatgcgcaatccacgttcctcgttgtacagaagtacgtcatcattgtgtgacaacaat
agtgtttcatcgaatgcatcgagtgcaatgtcatcaccattttataatggtcagacgaca
tttggtggtgcatcggcaacatcaagacgaatgagcgccgcaacaacagccgatattcaa
atgcaccatcgaccaaaggtaccaacaaatttggttacatcacggtctacatcgtcgcta
aatacaatcggtggtacatcatcatcggcatcaatgtcaacaaccgccaaacgtatttta
gatgtaatgagcaaatacaataccccactcaccgaagttcgacgcatttcgaatgcatta
ccatcgattgccgaaacaactgcgataaataaacgaaaatcgatattggaattggaaatg
acaagcacaacaaatgacaatgaaaaatcgaaacgtacactattgaaaccgaatacgcca
tacaatcgcccattcggacgaaatccggttgaatcgacgcttataactgagcttcatgtt
ccctcaatgcctgaattattgcaattgaaaaaatttgccacaaacacagtgaaaattcgc
gacatagccaacaaatccgataatattttgaataggcctgtttcctcggtagccgcggaa
tttaaattgtcgacaacgacaacaaagagcggatctgaaatagataaacgagcaaaagcc
gatatcgatgttagcaacaataataaattcgtaaataataaaaatgacgcaatgtcgaca
aaaatgtcgagtagtgcaaacgatgcgaataaagagcatcgaaataaaattcgtaataat
ttaaccaaacgaaatttgggcaaacgtgctgccgatgatgatgcaatgccagaaccggta
aatttgccaaacatctcattggtattggataaaaaggctgaaataaaattttcggaacca
ttaaaattaccgaatgccaccgatcaaaagttcaacatcggtaacaatgcattggataat
ggtccacaaattggaattccattcaaatttaagagctccaacacaaataccatcagcgcg
tccgccaccaaggaatgcaaacgtacgaatggaaacactagcgaaaatttgaaaaagttt
gacataagtccaacaaagccggcattgtcaacatcattgtcgtcatcatcaacggcagct
tcatttaatacatacatcagcgctgatctcgctgataaatcacagcaagcgcgaaagatt
tccagggaatcaacatctgtttatcgattcagtgaaccgattatcgttaaaacaacggcg
caaaattcatttggcaaacagtacaatagtttcggtgatattagtacaaattacaaattc
agcgaaccaatttacgtgactgatgacacatcgaatgaattactcaaaaacgacacatcc
aaaacattcggcaattttaaatttgatccaaaacaaataaaaggtgttccaagtgatagc
ggtattgcggacacacaatcatcgtttggttcgaatttcagtaaatcaacggtaaaatca
acactaaccagcgaattcggtaaatcaacaccatcatttggtgcacaagttaaagaagac
gatacattcaaatcactcgtagccaaacaaaagcaaggcaagtggtcttgcaaagattgt
agtgtatcaaatgaattgacagttgataaatgtgtatgttgcggctcagcaaaaataaac
gaaggtacaacaatagcaactgtgaaaagtacacaaagccaaccagccgccgccgccgtt
gatgatgtattcaaatcaattgtggccaaacaaaaacaatccaaatgggaatgcaacgat
tgcatgacacaaaacaatcagaccgaatcgaaatgcctttgttgtggtggtgccaatcca
aatgcatcatcgacaaatgttaccgatagtaaaccagtgccgataaaaccatcatatagt
ttcggtacgttgccatcgtcgtcgtcgtcgacaagtaacacatcagctgcctcaaatcag
cccatcgacagtgtattcaagtcgattgttgacaaacaaaagagcacatggaaatgttct
gcatgtctcaatgcgaatgaagtaacgaaatcaaaatgtgcatgctgcgaacagtcacga
gatgtaacaaagggtgctacaactagtgggactgtaccggctaaatcacaaatctccttt
ggcaatagttcaacatttgctccagtaaaaagtggtttttcattcggttctaatgcagat
acggctgtaggcgctacatcatcatcatcatcatcatttccctttggtaatctagccgct
gcaaaaacaatgccagcggctccattttcattcggaaatttaaaaaatagcgaatccgtt
accaaaacaaatacttcaataaatgatggcaaaactgaaacggaagaagccaaaggttcg
tcggtacaaaaaacacccgaaaaagcacccgctacgattgcaccattttcatttggaaaa
ccacccgtcttgccttcaacgagtaaagtcgaaacaaccgcaccgaaagtagaggctgca
tcaacgacacccgatagcatttttaaatcgattgttgataaacaaaagagctcatcgtgg
gaatgttcaacttgcatggcgaaaaattccaataatgatgtaaaatgtatgtgctgtgaa
acgccaaaagatggtagtgcgtcaaaagatcaaataaagaaagaatttagccttgaatcg
agccagaaattcgtattcggcactcagagcagtaacctatttagttttggttcaaagcaa
gataataaaaatagtattcaaattggcacttcatccagtagtacaagtacgccaaccaca
tcattgtcgtcgacaacaacagaaaccccaactgcatcgtcgtccacatcgaacttattt
ggaagcagtcaagcaccgacagtctcttttacagccaacaaaccgagcacaacagcaagt
cagcaagcgtctgtatttggtggatttacatttggatcgtcatcggttgcttcacccatt
tttggtagtaaaccatcaaaagatgaaaccgatactggtacatcgtcaacatcaaacact
aaaagcattaccgttttggacaatattttggttaaaccggccgcctcgacgaacggaccg
actgaatcaacaccagcaccgtttgttttcggtcaaggttttgccacaacagcatcaact
acaaccgatgatccagctaaggcgcaaaaacgaccaaactcggaatcatctgataacaac
gtcctcagcaaatttccagctacaacccccgctgctttaagtgctggtaattcgtttatg
tttggtcaaacccaaaacaccaatacttttagcaacaccaatacctttagtgccattgca
tcaaatccaacgtcaaatcttgcacaagtatcgaatactactcaaacgacaacaccgacc
acacagaacacttccacatttggatttggcgcgcctaaaccaacatcaacaaatgcattt
acaaatgtacagccgtcatttttcaatgcgactaacaatgcagcatcatcaacacccgcc
gcaagtccatttggtggcagcggaagtaatgcgaatgctagtaatgcatttccggtattc
ggcggtaatgccttttcatcgccatcatcgtcatcgcaacaggcacctccaaacaccgct
caacccgtctttggtagtagtatttttgcaccgcctgccgctacacaaccaacactcgga
ggcttcaaagctggctctacattcggaagctcaacacctgctttgggaacttcctcactg
aatactgcagcacaaccacaagcaacgccgggtctatttggtgcaagtaacaacaatcaa
agtgaaccaccaaaaccaggtggattcaatttttcactcaacacaccaccaacttttaat
ttcggtcaacaaaacactcaacaggcaaatgtaccgttccagttcggtgcaccagctgaa
gcaccaaatatgtttgcagctcaaccgggaaatgcggcggctattcagcaacgacgaaaa
attcgaccaattcgtcgtgtcaatcgaccttcaacgcagttttag
DBGET
integrated database retrieval system
