Contarinia nasturtii (swede midge): 116344385
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Entry
116344385 CDS
T08003
Name
(RefSeq) ribonuclease Z, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cns03016
]
116344385
Enzymes [BR:
cns01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
116344385
Transfer RNA biogenesis [BR:
cns03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
116344385
Prokaryotic type
116344385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
DUF5348
Motif
Other DBs
NCBI-GeneID:
116344385
NCBI-ProteinID:
XP_031628749
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MSKVKLQQHIATTQKQLLKIKEKNQKYVPGTVNLQIVGNGAPGAPASVYLFTDQSRYLFN
CGEGFQRLANEHKVKLTRLEHIFITRRKWHCIGGMPGLSLTIQDAGVPHITLHGPTKLYD
VFRGMRRFVILKNLKVDAPQCNQNGFYDDAVLKIHYLPLRRDESSDDYPVMSFICECKPR
PGALSLEKCLKLGVPKGPLLGKLKNGETLILDNGVTVRPEDVREPDDPGPVFLVIDIPSI
DFLISLQNNEKFTEYLRSSHAEPDRTDLILHFSPASVVGTDEYKEFVESFPTSTQHLLIN
EQNTFSGYVAAHRMQWQLNQLNESLFPILKEPLPVKQDEFENCTKKMKLSETPPQADTDQ
QVSRLQHAMPMTCVHLRPRKWIDRSIEARPSSAEFIKEITDIDGVTETLDALKRDRLHLS
PVDRNSQYPKIVFFGTGSCIPNKTRNVSSILVHTTKDDCILLDVGEGTLGQIYRFYGDES
DDVIRKLKAVYISHLHADHHIGLFGIIQKRHQLLCDESTPILLFAPNEMSSWLTFYDSEI
EPISSEFELIDNGSLIDEGLSAEKAALVGLCSLRTCGVVHCPNAFGVTMTINQDQPFKLT
YSGDTKPCNALIELGLNSTLLIHEATMEDELLDDALLKMHSTTSQAIEQGHRMNAKYTLL
THFSQRYAKIPRIEQHLVENVGIAFDNMEVVLSDLNYLNTLYPAMKTIFTEHWELMEQKS
IKRANKKAAEQSANVITN
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtgaagctgcaacagcacattgccacaacgcagaagcaattattaaaaata
aaagaaaaaaatcaaaaatatgtgccaggtacggtgaatctacaaattgttggaaatgga
gctccgggagcaccggcttcggtctatctgtttacagatcaatcaagatatctcttcaat
tgtggcgaaggatttcaaagacttgccaatgagcataaagttaaattaacgcgattggag
catattttcatcacacgtcgaaaatggcattgcattggtggtatgcctggtctcagtttg
actatacaagatgccggagtgcctcatattacacttcacggtccaactaaattatacgat
gtttttcgaggaatgcgaagatttgtgattttgaaaaatctcaaagtcgatgcgccgcaa
tgtaatcagaatggattctacgacgatgccgtattaaaaattcattacttaccacttaga
cgagatgagagtagcgacgattatcctgtgatgtcattcatttgtgaatgtaagccaaga
ccgggggcattaagtttggagaaatgtttaaagttgggcgtcccaaaaggtccattgtta
ggaaaattgaaaaatggcgaaacgcttattttggataatggcgtgaccgttcgaccagaa
gacgttcgtgaaccagacgatcctgggccagtttttctagtcattgatattccatcgatt
gatttcctgataagtttacaaaataatgaaaaattcactgaatacttgcgcagcagccat
gccgaacccgaccgaaccgatttaattttacatttttcaccagcatctgtcgttggcacg
gatgagtacaaggaatttgtagagtcatttccaactagcacacagcatttacttataaat
gaacaaaatacattctccggttatgtggctgcacatcgcatgcaatggcaattaaatcaa
ttgaatgaatctttattccccatcctaaaagaaccgcttccggtaaaacaggatgaattc
gagaattgcacaaaaaagatgaaattgagtgaaacaccaccgcaagcagatacggatcaa
caagtatcgaggttacaacatgcaatgccaatgacatgtgttcatttgcgtcctcgaaaa
tggattgatcgaagtattgaagcgagaccaagctcggctgaatttattaaagaaattacc
gacattgacggagtgactgaaacgttagatgctttgaaacgggatcgcttacatttatca
cctgttgatcgaaattctcagtatccgaaaattgtattttttggcaccggctcatgtatt
ccgaataaaacaagaaatgttagttcgattctggtgcacacaacaaaagacgattgcata
ttgctcgatgtaggtgagggtacactgggtcaaatatatcgtttctatggtgatgaatcg
gatgatgtcattcgaaaacttaaagctgtttatatttcacatttacatgctgatcaccat
attggtctttttggcataattcaaaagcggcatcagttactctgcgatgaaagtacacca
attttattgtttgctcccaacgaaatgagttcatggttgacattctacgatagtgaaatc
gagccaattagttccgagtttgaattgatcgataacggttcattgatagacgaaggtttg
tcagcagaaaaagcggccctcgtgggactatgttcacttcgtacctgtggcgttgtccat
tgcccaaatgcattcggcgtcacaatgacaataaatcaagatcaaccatttaaattgacg
tacagcggtgatacgaagccatgcaatgcactaatcgaactcggtttaaattcaacatta
ttaattcacgaagccaccatggaggacgaactactcgatgatgcattgctaaaaatgcac
agcacaacatcgcaggccattgaacaaggacacagaatgaacgcaaaatacacattacta
acacactttagtcaaagatatgcaaagattccacgcatcgaacagcatttagttgagaat
gtcggaatcgctttcgataacatggaggttgtcttgagcgatttaaattatttaaatacg
ttgtatccggcaatgaaaacaatattcactgaacattgggagctcatggagcagaaatca
ataaaacgagccaataaaaaagcggcagaacagtcagcaaatgtgattaccaattaa
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