Contarinia nasturtii (swede midge): 116344404
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Entry
116344404 CDS
T08003
Name
(RefSeq) high mobility group protein DSP1
KO
K10802
high mobility group protein B1
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03410
Base excision repair
cns04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116344404
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116344404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cns03036
]
116344404
03400 DNA repair and recombination proteins [BR:
cns03400
]
116344404
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cns04147
]
116344404
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
116344404
DNA repair and recombination proteins [BR:
cns03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
116344404
MMR (mismatch excision repair)
Other MMR factors
116344404
Exosome [BR:
cns04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116344404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
116344404
NCBI-ProteinID:
XP_031628780
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MSEHHRGAWGTREEAVWWPGAQDQQNMHQQQLINQHHQQQQQHQQLVQQQVQIQQHHVVQ
QTPQGQQHNDIARSINSNAPGQQIFSYKMASSFQNPAGGVTVATTNAGAYDYRLNMAPAA
ANTGAAAPGTQWWYTTGQNVEQIQQHNQAHQQTNQQHPQTNQHQQANQHIQDQHQIQQNH
QQNNQNNQHLQPIQTPTPAKRGKHADGKPRGRMTAYAFFVQTCREEHKKKHPEEQVVFAE
FSRKCAERWKTMLDKEKKRFHEMAEKDKARYDSEMQNYVPPKGVVLGRGKKRKQIKDPNA
PKRSLSAFFWFCNDERTKVKALNPEYGVGDIAKELGKKWSDVEPTVKSKYEAMAENDKKR
YEREMQEYKARCKGLPVGQPVGIQQAVPNQLKEEEDDEEDD
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaccatcgaggtgcatggggcactcgtgaagaggctgtttggtggccgggt
gcacaagatcaacaaaatatgcatcaacaacaattgataaatcagcatcatcaacagcaa
cagcaacatcagcaattggtgcaacaacaagtgcagattcaacaacatcatgtcgtacaa
cagacaccgcaaggccaacaacacaatgatattgcgcgcagtatcaattcaaatgcacca
ggccaacagattttctcgtacaaaatggctagcagttttcaaaatccagctggtggagtt
acggtggccacaacaaatgccggtgcctatgattatcgcttgaatatggcaccagccgct
gcaaatactggtgcagccgctccgggcacacaatggtggtacacaactggtcaaaatgtt
gaacagatccaacaacataaccaagcgcatcaacaaacaaatcaacaacatccacagacg
aaccagcatcagcaagcgaatcaacatatacaagatcaacatcagatccaacaaaatcat
caacaaaataatcaaaacaatcagcatctgcagccgattcagacacctacaccggccaaa
cgtggcaaacatgccgatggtaaaccaagaggtcgtatgacagcctatgcattctttgtg
cagacctgtcgtgaagaacataagaaaaagcatccggaagaacaagttgtttttgccgaa
ttctcaaggaaatgcgctgaaagatggaagacaatgttggacaaagaaaagaagcgattc
cacgagatggccgaaaaagataaggctcgttacgattcagaaatgcaaaattatgtgcca
ccaaaaggagttgttttgggtcgcggtaaaaagcgaaagcagatcaaagatccaaatgct
ccaaaaagatcgctgtccgctttcttctggttctgtaacgatgaacgcacaaaggttaag
gccttgaatcccgaatatggtgttggtgacattgccaaagaattgggaaagaaatggtca
gatgttgagccgaccgttaaatccaaatacgaggctatggctgaaaacgacaagaagcga
tatgagcgagaaatgcaagagtacaaggcaagatgtaaggggctcccggttggtcaacca
gttggcattcagcaagcagtgccgaatcagttaaaggaagaagaagatgatgaagaagac
gattag
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integrated database retrieval system