Contarinia nasturtii (swede midge): 116344530
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Entry
116344530 CDS
T08003
Name
(RefSeq) neurogenic locus Notch protein
KO
K02599
Notch 1
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04320
Dorso-ventral axis formation
cns04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116344530
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
116344530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
Notch
EGF_2
NOD
Ank_4
Ank_3
Ank_5
EGF_3
NODP
JAG1-like_EGF2
EGF_Teneurin
DDHD
Motif
Other DBs
NCBI-GeneID:
116344530
NCBI-ProteinID:
XP_031628992
LinkDB
All DBs
Position
Unknown
AA seq
2583 aa
AA seq
DB search
MDIWIKLFVCTILLCGLISGTEGFTSCAPSPCKNGGQCISKPKGESYCNCTTRYVGEFCE
HLNPCHTSSGPRCQNGGMCEVDYTSAVPTFKCRCPIGFTASLCEISERNACDSGPCQNGG
ACHLKSLQDYVCSCAQGYTGKYCEKQNLCASSPCNNGGTCISLPGGDFKCHCPKGFQGKT
CSEDVEECNTKPCQHGGTCHNTLGSYQCSCVAGYTGKNCESKYIPCAPSPCQNGGTCKSL
GHYAYECKCPPGFQGVNCEQNIDDCPGNLCQNGGQCVDGVNSYRCKCSPNYTGEYCENDI
DECLTRPSVCQNGATCTNTNGGYSCICVNGWTGPDCSENIDDCADAACFNGATCIDGVGS
FYCRCIPGKTGLLCHLDDACTSNPCHADAICDTSPVNGSYTCSCASGYKGVNCTEDIDEC
VQGSPCEHNGICVNTPGSFACNCSQGFTGPRCETNVNECESHPCQNDGSCLDDPGTFRCV
CMPGFTGTQCEININECENSPCLNGGSCMDMINGFKCVCPIGFSGSRCQTNIDDCMSQPC
RNNGICHDSIASYTCECPPGYTGFSCETNINDCQSSPCYRGTCIDGDNSFTCQCNPGYTG
ELCQTQINECESNPCQFEGHCEDLVGGYRCRCKPGTSGENCEVNVNECHSNPCRNGATCI
DGINRYTCKCVPGFTGAHCEINIDECASNPCANNGVCMDLINGFKCECPRGYYDARCLSD
VDECASNPCVNGGRCEDGVNQFICQCPSGYGGKRCEKDIDECDSNPCQHGGICIDGLNSY
TCNCMPGYTGENCETNIDDCVAQPCRNQGSCIDLVNGYKCVCKIPYTGRNCDYKMDPCHP
NQSIHPNRCHNGAKCTPSSNYQDFSCTCPLGYTGRLCDQDINECALQSPCRNGATCKNVP
GSYQCLCAEGYEGRDCTINTDDCASFPCSNGGTCLDGIGDFTCLCLDGFEGKHCEIDIDE
CASNPCRNGATCNQYVNSYTCRCPLGFSGMNCQTNDEDCTESSCMNKGTCIDGINSYNCS
CSAGYTGSNCQYKINKCDSQPCRNGATCTDHNNDYSCHCAYGFTGKDCTEYVDWCSQNPC
ENGASCSQRENTYKCSCLSGWTGKLCDVEMVSCKDAAIRKGVNVKELCNNGTCENFGNSH
KCHCHLGYTGSYCQKEINECESQPCQNGGTCKDLIGFYQCICRRGFQGQNCELNIDDCRP
MPCRNGGTCHDLVNGCSCSCPPGTLGMYCEVNIDDCVSGACHNNGTCIDKVGGYDCLCPP
GFVGSRCEGDINECLSNPCSSEGTLDCIQLVNNYHCNCKPGYMGHHCEIKIDFCATAPCQ
NGGLCSARAGGYHCECSEGWYGKFCENSGHDCDASPCVVGNCEVVIGGGYRCICPVGTSG
ENCEIDTFDECNPNPCKRGAACENKLGDFMCYCPAKWSGKTCNEFDPSYKGWIPSGGMLL
DLEHQREQCNKKGCGSKRGNRKCDEECNTYACDFDGNDCTLGVNPWANCTATTVNCWEVF
GNGVCNDECNNQHCLFDGRDCDKRLRPCAFDAYCAENYANGVCDQMCNSAECNWDGLDCD
KLNTPKLATGMISAIFLMSESEFKERSIQFLRDMGHQLRTNLRIKKDNLGNDMIYSWHGD
IDEMQTFSKKAIQVFMEIDNSRCQAILGAECFETAQDAAGFIGASARVMSNPDFRLYKVR
GVNSPDEPMGPPANGKYVALGAFTIILASFLLGIMITAKRKRAYGQIWRPEGFFTTSSRS
GQRRGPDGQEMRNLNKNSSLACIDASTNGQMGHSHQWSDDESQVPKRGRYEYDHTTSTDY
EEPNNRCWTQQHFEAAAIRIPASIMTPPSHHEKHDVDARGPCGMTPLMVAASQGVGVDLV
GELNEDESTVQAISELLAQGAELNATMDKTGETSLHLSARYQRADAAKRLLDAGADANCQ
DATGRTPLHTAIAADAIGVFQILLRNRATNLNSRMHDGTTPLILAARLAIEGMVEDLITA
EADINAADNSGKTALHWAAAVNNVDAVNILLMHHANRDAQDEKDETPLFLAAREGSLEAC
KALLDNFANREITDHMDRSPRDVACERQHNDIVRLLDEHVPRSPQMMPIMQNTVVNSPPC
QSQLVSQPTVIPNSGKQNKPQKKKQQKASASNNNNNPNSPDDETTLKRKSTAKKTSTSTK
KTNAQPVLPDIQLSSDGVFSTEDSPVASLPSPIQYDTASLYSNALAHHGIDVMTPKQPPS
YDDCIKNAQSMQSLHNINFDNYGYTMGSPFPDLMNTQRSVPNVNNMGDQGLSPPYSNQSP
PYSVQSNMALSPQGYIDSPSPAKNRPCLPTSPTHIQAMRHATQQKHGAQLHALNSTGSSV
QSPLSSSSSHCSNSPHSQSQLQHMQQQQLQMQAQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQAQQSQMQQQQHDFLQQLQQQTQPQVSQPQQDQNQASSTQQQNDGSNNGAIM
DFEYELSMAEIASYCSITGQMNHGSMSQHTNSTQSSPHSQQNYYQYLTPPSQHSGGITPQ
HMTHTLDSFPTPSPESPGHWSSSSPHSNSDWSEGINSPPANNMNYMANTGGNQTNKGTDA
IYI
NT seq
7752 nt
NT seq
+upstream
nt +downstream
nt
atggatatttggattaaattatttgtctgtacgattttactttgtggattaatctctgga
acggaaggatttacatcgtgtgctccatctccatgcaaaaatggtggtcagtgcatatcg
aaaccaaaaggcgaatcttattgcaactgtacaactagatatgtcggtgaattttgtgaa
catttgaatccatgccacacaagctctggaccaagatgtcaaaatggtggtatgtgtgaa
gttgattacacaagtgcagtgcctacattcaaatgtcggtgtccaatcggtttcactgct
tcgctctgtgaaatttcggaacgcaacgcttgcgattcgggaccttgtcaaaacggtggt
gcatgccatttgaaatcacttcaagattacgtatgttcatgtgctcagggatatactggc
aaatattgtgaaaaacaaaacttgtgcgcatcatcgccgtgcaacaatggtggtacatgt
atttcgttgcctggtggcgatttcaaatgtcattgtccaaaaggattccaaggaaaaaca
tgttccgaagacgttgaagagtgtaatacaaaaccatgtcagcatggtggaacttgtcat
aatacacttggatcttaccaatgttcttgcgtagctggatacaccggaaaaaattgtgag
tcaaagtatattccatgtgcaccgtcgccatgccaaaatggaggtacatgcaaatcacta
ggccactatgcctacgaatgtaaatgcccaccaggttttcaaggtgtcaattgcgaacaa
aacattgacgattgtcccggaaatttatgtcaaaacggcggacaatgtgttgacggcgta
aattcgtatcgttgtaaatgttcaccaaattatacgggcgaatattgcgagaatgacatt
gatgagtgtcttacacggccatcagtttgtcaaaatggtgccacttgcacaaacacgaat
ggcggttattcttgtatttgcgtaaatggatggacgggtcctgattgcagtgagaatatt
gacgattgtgctgatgcagcctgtttcaatggcgctacctgtatcgatggtgttggcagt
ttttattgtcgttgtattccgggcaaaacaggtttattgtgccatttggacgatgcttgt
acatcgaatccttgtcatgctgatgctatttgcgatacaagcccagtcaatggatcatac
acttgctcctgtgcatcgggctataaaggagtcaattgtactgaagacattgatgaatgc
gttcaaggatcaccgtgcgaacataatggtatttgtgtcaatacgcccggttcatttgcg
tgcaattgttcacaaggctttacgggaccacgctgtgaaaccaatgttaacgaatgcgag
agtcatccatgccaaaacgatggcagttgcctagatgatccaggaacattccgatgcgtg
tgcatgccaggctttactggaacccaatgtgaaatcaacattaatgaatgcgaaaactcg
ccatgtttgaatggcggcagttgtatggatatgataaatggatttaagtgtgtttgtccg
attggattcagtggatctcgttgtcaaaccaatatcgacgattgcatgtctcaaccgtgc
cggaacaatggaatttgtcatgattcgatcgcaagttatacgtgcgaatgccctcctggt
tatactggattctcatgcgaaacgaacatcaacgattgccaatcatcaccatgctaccgt
ggtacatgcattgacggcgacaactcatttacatgccaatgcaatccaggctatacgggc
gaattgtgtcaaacccagatcaatgaatgcgaatcaaatccttgccaatttgaaggtcat
tgcgaagatctcgttggtggttatcgatgtcgttgtaaaccgggaacatctggcgaaaat
tgtgaggtcaatgtaaacgaatgccattcaaatccttgtcgcaatggagcaacatgcatc
gatggaatcaatagatatacttgtaaatgtgttcctggttttacgggtgcacattgtgaa
ataaatatcgatgaatgcgcgtcaaatccgtgcgcaaacaatggtgtttgtatggatttg
atcaacggtttcaaatgtgaatgtcccagaggctattatgatgctcgttgcttaagcgat
gtcgatgaatgtgcatcaaatccttgtgttaatggcggccgttgtgaagacggtgtgaat
caattcatttgtcaatgcccttcgggctatggcggaaaacgatgcgaaaaagatatagat
gaatgcgattcaaacccttgtcaacacggtggcatttgtatcgacggtttgaattcgtac
acttgcaactgtatgcctggttatactggtgaaaattgtgaaacaaacatcgacgattgc
gttgctcagccgtgtcgcaatcagggttcatgtatcgatttggtgaatggctacaaatgt
gtttgcaagataccatacaccggtagaaattgtgactacaaaatggacccatgccatcca
aatcaatcgatccatccaaatcgttgccataatggtgcaaaatgtacgcctagctcgaat
tatcaagatttctcatgtacttgccccctcggctataccggacgtctttgcgatcaagac
ataaacgaatgtgcattgcaatcgccttgccgcaatggagctacttgcaaaaatgtaccc
ggttcatatcaatgtttgtgcgctgaaggttacgaaggcagagactgtaccatcaatacc
gacgactgcgcttcttttccatgctccaacggtggaacttgtttggacggaattggtgac
ttcacttgcttgtgtttggatggatttgaagggaaacactgtgaaatcgacatcgatgaa
tgtgcatcaaatccttgccgtaacggggctacatgcaatcagtatgtaaactcatacaca
tgccgatgcccacttggtttttcgggaatgaattgtcagacgaacgacgaagattgtacg
gaaagtagttgcatgaacaaaggaacttgtattgatggtatcaattcgtacaattgctcg
tgctcagctggttataccggatcgaattgccaatataaaataaacaaatgcgattcccag
ccttgccgcaatggtgcaacatgtaccgatcacaataacgactattcatgtcattgtgca
tatggattcactggcaaagactgtacggaatatgttgactggtgttcacaaaatccttgt
gaaaatggcgcatcttgttcacaacgtgaaaacacttataaatgcagttgtttatcaggc
tggaccggaaaattgtgtgacgtcgaaatggtttcatgcaaagatgctgccattcgcaag
ggtgtcaatgtaaaagaattgtgtaacaatggaacatgtgaaaactttggcaattcgcac
aaatgtcattgtcatttgggctacaccggatcgtattgtcaaaaggaaatcaacgaatgt
gaatcgcagccatgccagaatggaggaacatgcaaagatttaattggtttctatcaatgt
atttgtcgtcgtggattccaaggacaaaattgtgaactaaatattgacgactgcaggccg
atgccctgccgcaacggtggaacatgccatgaccttgtcaatggttgtagttgctcatgc
ccgccgggaacacttggtatgtactgtgaagtgaatatcgatgattgcgtttctggcgcc
tgtcacaacaatggaacttgtatcgataaagttggcggctacgattgcctttgtccacct
ggatttgttggatcacggtgtgagggtgatatcaacgaatgcttgtcgaatccttgctca
agcgagggtacactcgattgtattcaattggttaataactatcattgcaactgtaaaccg
ggctatatgggacatcattgcgagattaaaatcgacttttgcgcgaccgcgccttgccaa
aacggaggattgtgttcggctcgtgctggtggatatcattgcgagtgttcggaaggctgg
tatggaaaattctgcgaaaattcaggccatgattgtgacgcaagtccatgtgttgttggc
aactgtgaagttgtgattggtggtggctatcgttgcatttgtccagttggaacaagcggt
gaaaactgtgaaatcgacacattcgatgaatgtaatccgaatccatgtaaacggggtgct
gcttgcgaaaataaactcggcgatttcatgtgctattgcccagcaaaatggtcaggaaaa
acatgtaacgaatttgatccatcatacaagggctggattccaagtggcggaatgttactt
gatttggaacatcaacgagaacaatgtaataagaaaggttgcggttcaaagagaggaaat
cgtaaatgtgatgaagaatgtaatacatatgcgtgcgacttcgatggcaatgattgtaca
cttggcgtcaatccatgggccaattgtacggcaacaacggtcaattgttgggaagtattt
ggaaatggtgtttgcaatgatgagtgtaacaatcagcattgcttgttcgatggtcgtgat
tgtgataagcgattgagaccatgtgcattcgacgcttattgtgctgaaaattatgcaaac
ggtgtttgtgaccaaatgtgtaattcggctgaatgtaattgggatggattggattgtgac
aaacttaacaccccaaaattggctacgggcatgatttcagcgattttcttaatgagcgaa
tcagaattcaaagaacgttcgattcaattcttgcgagatatgggccatcaattgagaaca
aatttacgcattaaaaaagataatttgggcaacgacatgatttattcatggcatggtgat
atcgatgaaatgcaaacattttcgaagaaagccattcaagtctttatggaaatcgataat
agccgttgtcaagccattttgggagcggaatgttttgagactgcacaagatgcggccggt
ttcattggagccagtgcacgtgttatgtcaaatccagatttcagactctacaaagtgcgc
ggtgtaaatagcccagatgaacccatgggcccaccggctaatggaaaatatgtagcattg
ggcgcattcactattatattggcaagcttcttgctcggtattatgattacagcgaaacga
aagcgagcttatggtcaaatttggcgtccagaaggatttttcacaacatcatcgcgtagt
ggacaacgtcgtggaccggatggccaagaaatgcgaaatctgaataaaaactcatcattg
gcttgcattgatgccagtacaaatggtcaaatgggccattcacatcagtggtcagacgat
gaatctcaagtaccgaagcgaggccgatacgaatacgatcatacaacatctaccgattat
gaagagccaaacaatagatgctggacccaacaacactttgaagcagctgccattcgtatt
ccggcatcgattatgacaccaccatcacaccatgaaaagcacgatgttgatgcacgtggt
ccatgtggaatgacaccattgatggttgccgcttcacagggtgttggtgttgatttggtg
ggtgagctaaacgaagatgaaagcaccgttcaagcaatatcggaactattggcacaaggc
gctgaattgaatgccacaatggataaaactggtgaaacgtcactgcatctatcggctcgt
tatcaacgtgcagatgcagcaaaacgtttattggacgccggagctgatgcaaattgtcaa
gatgctactggccgtacaccattgcatacagcaattgccgctgacgctattggtgtattc
caaatactattgcgtaatcgagccacaaaccttaactcacgaatgcatgacggaacgact
ccattgattttggccgcacgtttggctatcgaaggtatggttgaagatctcattacggcc
gaagcagacataaatgcagccgataatagtggtaaaacggctctgcattgggccgccgcc
gttaataacgtagatgctgtgaatattttgctaatgcaccatgccaatcgtgatgcacaa
gatgaaaaagatgaaacaccactgtttttagccgctcgcgaaggatcactcgaagcatgt
aaagctctattggataattttgctaatcgtgaaattaccgatcacatggatcgttcaccg
cgtgacgttgcatgcgaacgacaacataatgatattgtacgactattggacgaacatgta
ccacgcagtcctcaaatgatgccaattatgcaaaacactgttgtcaattcaccaccatgc
caatcgcaattggttagccaaccaaccgttattccaaacagtggaaaacagaataaacca
caaaagaagaaacaacaaaaagcgtccgcatcaaataacaacaataatccaaacagtcca
gacgatgaaacaacgttgaaacgtaaatcaacggccaaaaagacttcaacatcaacaaag
aaaacaaatgcacagccagttttgcccgatattcaactatcgtcggatggtgtgttcagc
actgaagattctccagtcgctagtttgccaagtcctatacaatatgatacagccagtctt
tattcgaatgcattagctcatcacggcattgatgtgatgacacctaaacaacctccaagc
tatgatgattgcatcaagaatgctcagtcaatgcaatcgttgcacaatatcaatttcgat
aattacggttacacaatgggttcaccattcccagatctcatgaacacacaacgaagtgtt
ccaaatgtcaataatatgggtgatcaaggattaagtccaccatactcgaatcaatcgcca
ccatattcggtgcaaagtaatatggctctttcaccacaaggctatattgattcgccatca
ccggcaaagaatcgtccatgtttgccaacatctccaacgcacattcaagcgatgagacat
gcaacacaacagaaacacggtgctcaattacatgctctcaacagtaccgggtcgtcggtc
caatcaccgctcagtagttcatcatcgcattgttcaaacagtccccatagtcaatctcag
ctgcaacacatgcaacaacagcaattgcaaatgcaagctcaacagcaacagcagcagcaa
cagcagcagcaacagcaacagcaacaacaacagcaacagcagcaacagcaacaacagcaa
caacaacaacagcagcaacaacaacaggctcaacagtctcaaatgcaacaacagcagcat
gactttcttcaacaattacaacaacaaacacagccccaagtgtcacaaccacagcaagac
caaaatcaagcgtccagcacacaacaacaaaatgatggatcgaacaatggtgcaataatg
gattttgaatacgaattgagcatggccgaaatagctagctattgcagcattacaggtcaa
atgaatcatggttcgatgtcacagcacacaaattccacgcaatcatcgccacattcgcaa
caaaattattatcaatatttgacgccgccaagtcaacattccggcggaataacgccacaa
catatgacccatacactcgatagcttcccgacaccatcacccgaatcgccgggccattgg
tcaagctcatcgccgcactcaaattctgattggtccgaaggcatcaattcgcctccggca
aataatatgaattatatggcaaacacaggtggcaatcaaacaaacaaaggaactgatgcg
atttatatttaa
DBGET
integrated database retrieval system
