Contarinia nasturtii (swede midge): 116344536
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Entry
116344536 CDS
T08003
Name
(RefSeq) integrator complex subunit 6
KO
K13143
integrator complex subunit 6
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116344536
Spliceosome [BR:
cns03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
116344536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INT_SG_DDX_CT_C
VWA_2
Snf7
Motif
Other DBs
NCBI-GeneID:
116344536
NCBI-ProteinID:
XP_031629000
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MTIILFLIDTSASMCQKAYVNGVQKTYLDIAKGAVETFLKYRQRSQDCMGDRYMLLTFED
PPCNVKAGWKENHFTFINELKNLQSNGLTSMGEALKNAFDLLNLNRMQSGIDTYGQGRCP
FYLEPSVIIVITDGGRYSYKNGVHQEIVLNQYTGMKLTKEPFRWDQRLFSLVLRMAGNKV
DERVEGKVPHDDSPIERMCEVTGGRSYRIKSQYVLNQCIESLVQKVQPGVVVQFEQLLAK
DLKDGEIQDIAFQQTKKMIYVAKHPSQKNQFPVGFWPIPEPYWPDAKLITLPTRDAHPKI
RIITPCVDEPPMVRNFPVDKYEVEASPLTLQILSKRESNKCWPVVISNGNYTLEQPFGYL
KTCPPFTQVYLIILPYNYPVLLPLVNELLHKYNSSPPPDWTYRFSLYLRQIPPYYAPFLR
RALNTANVPYNFLQYILPENLDNYLSPSVANYLKTIKNTAKQEQENMCLRVLKQLKMPKP
PFHQVETTKLNLGLNSKRDLVTHPQLRETFAKVNSEVISSENYTIVVPTVNEQGPAKNYR
NPFDIPRHDLIDEIARMRENFYKLPTSNITITSKDFGHCLPISDMGNYQEYLKNKETPLR
EIEPTNVRQHMFGNPYKKDKHMVMVDEADLGEVIMKPSPNPLGKKMEVINRTRKRKAGPI
RKDYVFRRLSTDSCSSFGSNDSSDADDTRSISDTLSINSDSDENELTIDLGFNQPSVVEQ
DFMVNGHVQSFINGENSDDSDDVIMQPAPSISTQNLNTGPLLSPILINAPYINQTLPSPI
QIQAPIPIAINQTYPTPSTTSSPLSQQNGSSTQPTVVTPAAPPPAHAQAHNDLNDAQEIS
KILQQCHNGTTTNSASNSNNISISNNNSNSSISHGNINSNNSNGNSGILFEPISSSHLNQ
KSSTTSSSTTSSTTSSSINRDTPTTNRNEFEVANPFTPTTNVSHHSTHNHHTNNLDSTAT
HKKQQHHDIQSNTTTNNNSKSEEDTHHRNDNDDELKETIRQHNLQTRKIIFQDIRRPGRD
YSQLLEHLDLIKGNLETKLQFIEMCIEESQRFRRKKMADCIQEWWDKYVDRTNNFNSIEF
AT
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgacaattattttatttctgattgacacatcggcatcgatgtgccagaaagcatatgta
aacggtgtacaaaagacttatttggatattgcaaaaggtgcagtggaaacatttttaaaa
tatcgacaacgatcacaagattgtatgggcgatcgttatatgctgttaacatttgaagat
ccaccgtgcaacgtaaaagctggatggaaagagaatcattttacatttataaatgaattg
aaaaatttacaaagcaatggactcacatcgatgggtgaagcattgaaaaatgcattcgat
ttacttaatttgaatcgaatgcaatcgggcattgatacatatggacagggacggtgtcca
ttttatttagaaccatcggttataattgtcatcaccgacggtggacgctactcgtacaag
aatggagtacatcaggagatcgtattaaatcaatatacaggcatgaaattaacaaaggaa
ccatttcgatgggatcaacgattattttcgctggtgctacgaatggccggtaataaagtt
gatgaaagagttgaaggtaaagttccacatgacgattcgccgattgaacgaatgtgtgaa
gtgacgggtggccgttcgtatcgtataaaatcacagtatgtgttgaatcaatgtattgaa
agtttggtgcaaaaagtgcaaccgggtgttgttgtccagtttgaacaattgttggccaaa
gatttgaaagacggtgaaattcaagacattgcatttcaacaaacaaagaaaatgatttat
gtggcaaagcatccatcacaaaagaatcaatttccggttggtttttggcccatacccgaa
ccatattggcccgatgcaaaactcatcacattgcccacacgcgatgcacatccgaaaatt
cgcataatcacaccatgtgtcgatgaaccgccaatggttcgcaattttccggttgataaa
tatgaagtcgaagccagtccattaacactacagattttatcaaaacgtgaatcaaacaaa
tgttggcccgttgtgatttcaaatggtaattatacgcttgaacaaccattcggataccta
aaaacgtgtccaccatttacgcaagtgtatttaatcattttgccatataattatccggtt
ctgttgccgttggtaaatgagctactgcataagtataattcatcgccaccacccgattgg
acctatcgttttagtttgtatctgcgtcaaataccaccatattatgcaccatttctacga
cgtgctctcaacacagccaatgttccgtacaattttctacaatacattctgcccgaaaat
ttagataattatctcagtccgtcggttgcaaactatttgaaaacaattaagaatacagca
aaacaagaacaagagaatatgtgcttgcgtgtgctgaaacaattgaaaatgccgaagcca
ccattccatcaagttgaaacgacaaaattgaatttgggactgaattcaaaacgtgatctc
gtcacacatccacaattgcgtgaaacatttgccaaagtaaatagtgaagtgatttcatcg
gaaaattatacgatcgttgtgccgacggtgaacgaacaaggtccggcaaaaaattatcga
aatccattcgatattccacggcatgatctgatcgatgagattgcacgcatgcgagagaat
ttctacaaacttcccacatccaatattacaatcacaagcaaagattttggtcattgtttg
ccaatttccgatatgggcaattatcaagaatatttgaagaacaaagagacaccattgcga
gaaattgaaccgaccaatgtgcgacaacatatgtttggcaatccatacaagaaagacaag
cacatggtgatggtcgacgaagccgatttgggtgaagttataatgaaaccgagcccgaat
ccattgggaaagaaaatggaagtcattaatcgtacgagaaaacgaaaagcaggcccaatt
cgaaaagattatgtgttcagacgcttgtcaaccgattcgtgcagcagctttggttcgaat
gattcgagcgatgcggacgatacacgttccatatcagatacattatcaataaattcggat
agtgatgagaatgagctaacaattgatttgggtttcaatcaaccatcggtggtggaacaa
gattttatggtgaacggtcatgtgcaaagtttcatcaatggtgaaaatagtgatgattcg
gatgatgtaataatgcaaccagcaccatcgataagtacacaaaatttgaatacgggtcca
ttattgtcaccaatcctgataaatgcaccgtatataaatcaaacgttgccttcgccaata
caaatacaagcacccataccgattgcgatcaatcaaacgtatccaacaccatcaaccaca
tcatcgccactgtcacaacaaaatgggtcgtcaacacagccaacggtggtaacgccagct
gctccacctccagcccatgctcaagcacacaatgacttaaatgatgcacaggaaatttca
aaaattctgcagcaatgccataacggaacgactacaaatagcgccagcaacagtaacaat
attagcataagcaacaataatagcaacagttcaatctcacatggaaatatcaacagcaat
aatagtaatggaaatagtggcatattatttgagccaatttcgtcatcgcatttaaatcaa
aaatcatcaacaacatcatcatcaaccacgtcgtccacaacgtcgtcgtccataaatcgt
gatacgccaacaacaaatcgcaacgaatttgaagtcgcaaatccattcacaccaacaacc
aatgtatcacatcattcgacacacaatcatcacacaaacaatttagacagcactgcaacg
cataaaaaacaacaacaccacgatattcaaagcaatacaacaacaaataataatagcaaa
tccgaagaggacacacatcaccgcaacgataatgatgatgagctaaaagaaacaatacga
caacataatttacaaacacgaaaaattattttccaagatattcgacgacccggtcgtgac
tattcacaattgcttgaacatttggatctgatcaaaggcaatctggaaacaaaattacaa
ttcattgaaatgtgcattgaagaatcgcaacgattccgacggaaaaaaatggccgactgc
attcaagaatggtgggataaatatgttgatcgaacgaataatttcaattcaattgaattt
gccacgtga
DBGET
integrated database retrieval system
