Contarinia nasturtii (swede midge): 116344609
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Entry
116344609 CDS
T08003
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
cns
Contarinia nasturtii (swede midge)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
WW
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116344609
NCBI-ProteinID:
XP_031629085
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MKDPSSKNFYHAPPVDRLTMPSMNFLQQQPDDDDGLGPLPPKWEKAYTENGETYFIDHNT
GTSHWLDPRLSKFQKKSLEDCMDDELPYGWEKIHDPQYGTYFIDHVNRRTQYENPVLEAK
RRNSERKTNGANQSASSKSLNDELMMRQNESQSQQQQQQQQHHQHQQQQIQSEQSQLKPN
LFTKNPSELRGERINTTLLKSSRGLGFTIVGGDDNIEEFLQIKSIVANGPAWLDGKLQTG
DILVYVNDTCVLGFTHHEMVNVFQSILPGETVTLEVCRGYPLPFDPNDPNNEVVTTIAVD
GINSDPEKSRMLMDLNMDGNYNFLDMSDTQSASTSAKHNSTLSRLESSSVRSDISENFAN
ESKRDLISSSDKPEILNISIVKGPLGFGFTIADSAYGQKVKKILDRNCCKELNEGDYLLA
INNTNVMYMSHSAVVQVLKNCPKSEEAILKIQRGSYFNGGNISDKPTSRVRRVIDSIDRA
AIMNGNASKEALNLYRSKTPTADLYSTQTKEILPIRSKTPLVDTRSRAKTPMSELNGGEE
EVDGTMQSHNDGTIHDLKNIAAADTKSNNSFPDQDSINNEAPFIDPFPKLVLNLSDRLAE
ASLGAGNHYQTKDLSNIRHNHFDSQPNLNNFEQNSVSSGHDFYVNYNSNLASGYTNSPSN
SIYAASANTMPTHMKMPLMAPMPTYHHEHCYCFECQRQYRYHNILIDRRKVGFSPLDTHA
PMASPHPIHMNQPQSPQHLHQAHHENNYWTKNDMKIQQQENFGYMLSEVTLERQTMGFGF
RIVGGTEEGSQVTVGHIVEGGAAYNNPRIETGDEILSIDGHNVVQSSHHRVVELMSDAAQ
RGRVTMILRRRVHDPNIANLQHLQHHSHHQHVQHPHLQRDFVYPYDVIVVRNENESFGFV
IISASNQYYSSTIGKLIPGSPADRCDELKVGDRIIAVNGINIAGMSHGDVVNLIKESGLH
VRLTIGNPKETLQSNSVHTQPINPNNNLNDPYFEHRNNGLVSITNDNLNVDVYQPNNH
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatccatcatcgaaaaacttctaccatgcaccacccgttgatcgtctgacgatg
ccgtcgatgaatttcttgcaacaacaaccggacgatgacgatggcctaggcccattgcca
ccaaaatgggaaaaagcatacactgaaaatggtgaaacctactttatcgatcacaacacc
ggcacatcacactggttggatccacgtttatcaaaatttcaaaagaaatcgctcgaagat
tgtatggacgatgaactaccgtacggttgggaaaaaattcatgatccacagtatggtaca
tattttatagaccatgtcaatcggcgaacacaatatgaaaatcctgtgctcgaggcaaaa
cgacgcaattctgaacgcaaaacaaatggagccaatcaatcggcttcgtcaaagtcacta
aatgatgagctgatgatgcgccaaaatgagtctcagtcacagcaacaacagcaacagcaa
cagcatcatcagcatcaacaacaacaaatccaatcggaacaatcccaattgaaaccaaat
ctatttaccaaaaatccgtcggaattacgaggtgaacgaataaataccacattattgaaa
tcgtcacgtggtctcggctttacgattgtcggcggtgacgataatattgaagaatttcta
caaataaaatcgattgtcgcaaacggaccggcatggttggatggtaaattgcaaaccggt
gacattttagtgtatgtaaatgatacatgtgtattgggttttacacatcatgaaatggta
aatgtgtttcaatcaatattgccgggtgaaacggtgacattagaagtgtgtcgaggctat
ccattgccattcgatccgaatgatccaaacaatgaagtggtaacaacaattgccgttgat
ggcatcaattcagatccggaaaagtcacgcatgctaatggatttaaatatggatggaaat
tataattttcttgatatgtctgatacacagtcggcaagtacatcggccaagcataattca
acgttaagccgactcgaatcgagttcggtgcgcagcgatataagtgaaaattttgcaaac
gagtcaaaacgtgatttgatttcatcaagcgataaaccggaaattttaaatatttcaata
gtaaaaggaccgcttggattcggtttcactattgccgacagtgcttatggtcaaaaggtg
aaaaaaattctcgatcgaaattgttgcaaagaattgaacgaaggtgattatttgcttgca
atcaacaatacaaatgttatgtatatgtcacacagtgcggttgttcaagtgctaaaaaat
tgcccaaaaagtgaggaggcaattttgaaaattcaacgtggcagctattttaatggtggc
aacattagcgataagccaacaagtcgagtgcggcgtgttattgattcaatcgatcgagcc
gctataatgaatggtaatgcatccaaagaagcgttaaatttgtatcgcagtaaaacacca
acggcagatctgtacagtacacaaacgaaagaaattttaccgattcgatcgaaaacaccg
ttggtcgatacacgaagtcgtgcaaaaacaccaatgagcgaacttaacggtggcgaagag
gaagtcgacggtacaatgcaatcacacaatgatgggacaattcatgatttaaaaaatatt
gcagcagccgatacaaaatcaaataatagctttcccgatcaagattccatcaataatgag
gcaccttttattgatccatttccaaaattggttctaaatttatcggatcgcttggctgaa
gcatcgctgggtgctggaaatcattatcaaaccaaggatctttcaaacattcgccataat
catttcgatagtcaacccaatctcaataattttgaacaaaatagtgttagcagcggacat
gacttttatgtgaattataattcgaatttggctagcggatatacaaattcaccgagcaat
agcatatatgcggccagcgcaaatacaatgccaacacatatgaaaatgccactgatggca
cccatgcccacgtatcatcatgagcattgctattgttttgaatgccagagacaatatcga
tatcataacattttaattgatcgccgcaaagttggatttagcccattggatacacatgca
ccaatggcatcgccgcatccaattcatatgaatcaaccacaatcgccacagcatttacat
caagcacatcatgagaacaactattggacgaaaaacgatatgaaaatacaacagcaggaa
aactttggctatatgttatcagaagttacactcgaacgacaaacaatgggctttggtttt
cgtatagttggcggcaccgaagaaggatcacaagttactgttggtcacattgttgagggc
ggagccgcttataataatccacgaattgaaacgggcgacgaaattttgagcattgacggt
cataatgtcgtgcaatcatcacatcatcgtgtcgtcgaattgatgagtgatgctgcgcag
cgaggccgtgtaacaatgatattacgacgacgtgttcatgatccaaatattgcaaatctt
caacatttacagcatcattcacaccatcaacacgtacagcatccgcatttacaacgtgat
tttgtctatccatacgatgtgattgttgttcgaaatgaaaatgaaagttttggcttcgtt
atcatttcggcatcaaatcaatactatagttcgaccataggaaaattgattccaggaagt
ccagccgatcgttgtgatgaattgaaggtcggtgatcgtataattgctgtgaatggaatc
aatatagctggtatgagtcatggcgatgttgtaaacttaatcaaagagtctggattgcat
gttcgtcttaccattggcaatccaaaagaaacactacaatcgaattcagttcacacgcaa
ccaatcaatccaaataataacctaaatgacccatacttcgagcaccgaaacaatggcctc
gtctcgattacaaatgacaatttaaacgtagacgtttatcaaccgaataatcattga
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