Contarinia nasturtii (swede midge): 116344671
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Entry
116344671 CDS
T08003
Name
(RefSeq) trithorax group protein osa isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116344671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116344671
03021 Transcription machinery [BR:
cns03021
]
116344671
03036 Chromosome and associated proteins [BR:
cns03036
]
116344671
Transcription factors [BR:
cns03000
]
Eukaryotic type
Helix-turn-helix
ARID
116344671
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116344671
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116344671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
116344671
NCBI-ProteinID:
XP_031629174
LinkDB
All DBs
Position
Unknown
AA seq
2075 aa
AA seq
DB search
MAQQQNDSLNQMPTSENSYMNDVTGKSFPQNGNNLDPTKNVSNMNEPQKGKPSGPNGNSA
AAAGPVGMPPAHDASGMHLGPYGHPMQHHHMPPEIDQQQQPIEHMYNPQAPYGRYHDPNM
PPMDMYGRYHPGGLEMKISPNRPPPQRYPQQQPQTSASNQQQQQSYSAHPTHAPHTGEQA
AQEQTQQPPNPIGQTPTLNSLLQSHQTAGPPQPHHHRYPNSYEQQSSQQPAYGAQTWNPS
AAPQQRPYSPQMGQQAYRPPPPNANAARIHPSMGSYPPPPPQQNQSGQLGPAGAMQYSPY
PQRYPTPPGNVATGTNHRPAYPASHQYPPDQSRPWPPPTGPTAQTTHGHAPHQHPPSPQH
HVTAQSPVHAPSPSPQPPQPSNSPHQEICQNSNESNAPGATTNTPNSMTMRPTPSPTGSS
GSRSMSPAVPQNHRPPYQHPGEQQQPMDPNAQQQRSPMIPNAQSASDFYEKRNLQGNYPT
PPSPHKYPPPPQATGPNAMPPQGMPPYGSQSQQFPQGNYPARPQYPSNYGQVNGPANAPH
VPNQNQYGRPMPNQTQFPQGNYPTPPTPHMHGAYKGGAVNGPAPNSAPGSPRPLNHLKQH
LLHKGGYGNQSPTSPQSFVNGPGMHQPMGPPQMQAPSRMQAPGSMGPPFSPHHNSQAGNT
HQGGMIPLPESQDNGISSGSSSSSQHPVTSVITTGPDGTTIDEASQHSTISNASAASDPS
DPQCSTPKRKGEPYNQSHLASAGSTPTMHEDFEMGSPTWPRTPASPVFNSHTEPTPHRSS
SKQKSDSLCKLYEMDDNPERRPFLDKLLSFMEERRTPITACPAISKQPLDLYRLYTSVKE
RGGFLDVCKVPKSKLWKDVAAILGIGASSSAAYTLRKHYTKNLLPFECQFDRGGIDPLPL
IQQVESNSKKKTPKPASAPSPDANHKGSSNSQDSFQVAQIQSPPGSSSASMDSFNAYPPP
PQQQPPQQQQQQQQQQQQQQQTQQQTTGPSVPVPPNAYPQPNAAGKSATSTPQYPVEQQP
YGPPAQQPPFQQPQQGQFAAPNRYPPYGDAPDARYNQHQSPHQPPHQPPPPPTAQQSATQ
APPSSQAPSGPLPNAPPSQYPQGPPPQQFDYRQQEPPQSRRHPDFAKESQYSPAPAPYNQ
RPQLYPNWQGNASPSHYNRQYPQAPQQWANQRLPGPPVGPMGAPVQNAQWEQQRYPPQNT
HPPYPGNQVQPPQWTGMNQSQLSNVPAIRPPQRPGQIPGKNIAGPMPPPQLAKQTQVAPF
PSASPAKRDIVFPTKTPNVGDSVEAVTPLLYRRKRLTKTDIGQTDMWRIFMCLQSGLLSE
STWALDVLNILLFDDSSIQWFSLAYLPGLLNMLLDHFQKSLTDMFDSNKFSGRPAKPQLK
AENNRILSKDDAIVDGKGNDDDDDNEEEDDDGLLKDCKEFVDLGQVTKQPNPNERLVVFH
SMTNYTMCSRKGVPVRIKEADDDIFVLDSKRNWDIHADVDQQINTDAENDVWSYGHIEPD
PYTHIIDPFKGEFVNIPFAKYIKSSDRKRKASADETNAEKKTVTSDAPNSANGDSKKSSV
HSPNPSVKEEKIDDINDEPKVVDVNDADKAVAIEKTKDIKSEPMETDENETTAAATKKTD
DSTSSKTSESSEPSKKEQSPIMDSDCREVDMELEKLSNGPQSNDATANVKESESIKSDNT
TNSFDVKKTIQDPAETLKRRRIGDFEDECYARDEASLYLISESQDTVARRCISISNILRN
LTFVPGNETVFANSETFLAILGRILLLHHKHPVRTQTIRNYDREDDNDFSDSCSSLQGEN
EWWWDYLIQLRENMMVAVANIAGHMQLTNYDEIIARPCLDGLLHWAICPSAHGQDPFPSS
GPTSVLSPQRLALEALCKICVTDANVDLVIATPPFSRLENLCSVLTRHLCRNEDQVLREF
SVNLLHYLASAESSMARTVALQSPCISYLVAFIEQAEQTALGIANQHGINYLRENPDSMG
TSLDMLRRTAGTLLHLARHPDNRPLFLQQEQRLLGLVMSHILDQQVALIISRVLFQVSRG
GGACESPAKKVKRRPLPQNSATKLVPNTESSIPVS
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaacaacaaaatgacagcttaaatcaaatgccgactagtgaaaatagttatatg
aacgatgtaacgggtaaaagtttcccacaaaacggtaataatttggatccaacaaaaaat
gtgtcaaacatgaatgaaccacagaaaggcaaaccatctgggccgaatgggaatagtgca
gcagcagctggtccagttggaatgccaccagcgcatgatgccagcggcatgcacttagga
ccatacggtcatccaatgcaacatcatcatatgccacccgaaattgatcagcagcagcaa
ccaattgaacatatgtataatccacaagcgccatacggtcgctaccacgatccaaatatg
cccccaatggatatgtatggaagatatcatcctggcgggcttgaaatgaaaatttcacca
aatcgaccaccaccacaaagatatccgcaacaacagccacaaacatcggcttcaaatcag
caacaacaacaatcttattcggctcatccgactcatgcaccacatacgggtgagcaagca
gcacaagaacaaacacagcagccaccaaatccgataggacaaacgccaacactaaattca
ctattgcaatcgcatcaaacggctggcccaccacagccgcatcatcatcgatacccgaat
agctacgaacaacaatcaagtcagcagccagcttatggtgcccaaacgtggaatccatcg
gctgctccacaacagcgtccatacagtccacaaatgggccaacaagcttacagaccacca
ccaccaaatgcgaatgcggcacgaattcatccatcaatgggttcgtatccaccaccgcct
ccgcaacaaaatcaatctggccagttgggaccagcaggtgcaatgcaatattcaccgtat
ccacaacgatatccaacgccgccaggcaacgtggcaaccggaaccaatcatcggcccgct
tatccggcatcacatcagtatcctcccgatcaatcgagaccatggccaccaccgacgggg
ccaacagctcaaacgacacatggacatgcaccacatcaacatccaccatcacctcagcat
catgtcaccgctcaaagtccagtgcatgcaccaagtccatcgccccaaccgccccaacca
tctaattcgccgcatcaggaaatttgccagaacagcaatgaaagtaatgcacctggggca
acgacaaatacaccaaattcaatgacgatgcgaccaacaccatcgccaactggaagctca
ggatcgaggtcaatgtcaccagcagtaccacaaaatcaccgacctccttatcaacatcca
ggcgaacaacaacaacccatggatccgaatgcacagcaacaacgatctccgatgataccg
aatgcacaatcggccagcgatttctacgaaaaaagaaatcttcaaggaaattatccaaca
ccaccttcaccacacaagtatccgccaccaccacaagcaactggcccaaatgcaatgcca
cctcaaggaatgccaccctatggaagtcaatcgcaacaatttccacaaggcaactatcct
gctcgaccacaatacccatcaaattatggacaagttaatggtccagctaacgcacctcat
gttccaaatcaaaatcaatatggcagacccatgcctaatcaaacacaattcccacaagga
aattatccgacgcctccaactcctcatatgcatggtgcttataaaggcggtgcagtgaat
ggaccagcaccaaattcagcacccggttcaccacgtccattgaatcatttgaaacaacat
ttattacacaaaggtggttacggcaatcaaagtccaacatcgccacaaagctttgtaaat
ggaccgggaatgcatcaaccaatgggcccgccacaaatgcaagccccttcgcgaatgcag
gctccaggaagcatgggaccaccattttctccgcatcataattcacaagctggaaatact
catcaaggcggtatgatcccgcttcccgaatcacaagacaatggcatttcgtccggctca
tcatcatcgtcacagcatcctgtaacgtctgttattacaactggcccggatggaacaaca
attgatgaggctagtcagcacagtactatttccaatgcctcagcagcatcagatccatca
gatccacaatgctcgacaccaaaacgaaaaggagaaccatataatcaaagccatttagca
tcggctggcagcacgccaacgatgcacgaagatttcgaaatgggatcgccaacttggcca
cgaacaccagctagtcctgtttttaatagccacactgaaccaacaccgcatcgatcatcg
tcgaagcaaaaatcggacagtctgtgtaaattatatgaaatggatgataatccagagcga
cgaccattcttagataaattgcttagttttatggaagagagacgaacaccgatcacagct
tgtccagcgatatcgaagcaaccattagatttgtatcgtttatacacatcagttaaagaa
cgtggtggttttcttgatgtttgtaaggttcctaagagtaaattatggaaagacgttgcc
gctatacttggaattggtgctagcagtagtgcagcgtatacattaagaaaacattacaca
aagaatttgctcccattcgaatgtcagtttgatcgtggcggcattgatccattaccgctt
attcagcaagttgaatcaaattcgaagaagaaaacgccaaaacccgcatcagctccatca
ccagacgcaaaccacaaaggttcatcgaattcacaagactcatttcaagtagctcaaatt
cagtcgccacctggttcaagttctgcatccatggatagttttaatgcatatccgccacca
cctcaacagcagccgccacagcaacagcaacagcagcaacaacagcaacaacaacaacaa
cagacacaacagcaaacaactggcccaagcgttccggttccaccaaatgcctatccacaa
ccgaacgctgcaggtaaaagcgcaacatcaacgccacaatatccagtcgaacaacaaccg
tacggtccaccagctcaacagccaccatttcaacagcctcaacaaggccaatttgcagca
ccaaatcgttatccaccttatggtgatgctcctgatgccagatataatcagcatcagtca
ccacatcagccaccgcatcagccaccgccgcctccgactgctcaacaaagtgctacacaa
gcaccaccatcttcccaagctccatctggaccattgcctaatgcaccaccttcacaatat
ccacaaggtccaccgccacagcaattcgattatcgacaacaagaaccaccgcagtcaagg
cgtcatccagattttgcaaaagaatctcaatattcaccagcgccagctccatataatcaa
cggcctcagctttatccaaattggcagggcaatgccagcccatcgcattataatcgtcaa
tatcctcaagcaccacaacaatgggccaatcaacgattaccgggaccacctgttggtccc
atgggagcgcccgttcaaaatgctcaatgggagcaacaacgttatccaccacaaaacaca
catcctccctatccaggtaatcaagtgcaaccaccgcaatggactggcatgaatcaatca
caattgagcaatgttcctgccattcggccaccgcaacgtcctggtcaaattcctggtaaa
aatattgcaggtccaatgccaccgccgcagttggcaaaacaaacacaagttgcaccattt
ccaagtgcatcgcccgccaaacgtgatattgtctttccgactaaaactcctaatgtaggt
gatagcgttgaagctgttacaccgttgctgtatcgacgaaagcggcttacgaaaaccgac
atcggtcaaacggatatgtggcgaatattcatgtgtcttcaatcaggactattgtcggag
agtacatgggcattggatgtgttgaacattttattattcgacgattcatcgattcaatgg
ttttcattggcatatttacccggtctgttgaatatgctgctcgatcatttccaaaagagt
ttgaccgatatgtttgacagtaataagtttagcggacgaccggcaaagccacaattgaaa
gccgaaaataatagaatattgagcaaagatgatgcaatcgtggatggcaagggaaatgat
gacgacgacgataacgaagaagaggacgacgatggattgctgaaagattgcaaagaattt
gttgatttaggacaagttaccaaacagccaaatccaaatgagcgtttagttgtgttccat
tcaatgaccaattatacaatgtgctcgcgcaaaggtgtgccggttcgaataaaagaagcc
gatgatgatatttttgtgctggattcaaaacgaaactgggacattcatgccgatgttgat
caacaaatcaacactgacgcagagaatgatgtttggtcatatggtcacatcgaacccgat
ccgtatacgcacattattgatccatttaaaggtgaattcgtaaacattccatttgcaaaa
tacattaaatcaagtgatagaaaacgaaaagcgtcggccgatgaaacgaacgccgaaaag
aaaacggtcacaagcgatgcaccaaattcggccaatggtgatagtaaaaaatcaagtgta
catagtccaaatcctagtgtaaaagaagaaaaaattgacgacataaacgatgaaccaaaa
gtcgttgatgtaaacgatgccgataaagcggtggcaatcgaaaagacaaaagatatcaaa
tcggagccaatggaaacggatgagaatgaaacaacagcagcggcgacgaagaaaaccgac
gattcgacatcgtcaaaaactagcgagagcagtgaaccaagtaaaaaagaacaatcgcca
attatggatagcgattgtcgtgaggttgacatggaattggaaaaactatcgaatgggcca
cagagcaatgatgcaactgccaatgtaaaagagagcgaaagtataaagtctgacaataca
acgaactcattcgacgtgaagaaaacaattcaagatccggctgaaacattaaaacgtcgt
cgcatcggcgatttcgaagatgaatgctatgcacgtgatgaagcctctctatatttaatt
agcgaaagtcaagacactgttgcacgacgctgtatatcaatatcaaacattctacgaaat
ttgacatttgtccccggcaatgaaactgtattcgccaactctgaaacattcctagccatt
ttgggtcgaattttattattgcatcacaagcatccggtgcgaacacaaaccattcgcaat
tacgatcgtgaggatgataacgatttctctgattcgtgtagcagtttacaaggcgaaaat
gaatggtggtgggactatttgattcagttacgtgaaaatatgatggtggccgttgccaat
attgccggtcacatgcaattgaccaactatgatgaaatcatcgcacgaccatgccttgat
ggtttattacactgggccatatgtccgtcggcccacggacaagatccattcccgtcgagc
ggtccaacatcggtattatcaccacaacgattagcattggaagcactctgcaagatttgc
gtaaccgatgcaaatgttgatttagtgattgcaacaccgccattctcacgcctcgaaaat
ttatgctcagtactaactcgacatttatgccgaaatgaagatcaagtgttgcgtgaattt
tccgttaatttattgcattatttagcatccgctgaaagttcaatggcacgaacagttgca
ctgcaaagtccatgcatttcgtatttggtggcgtttatcgaacaagccgaacaaacggca
ttgggcattgcaaatcaacatggcatcaattatttgcgtgaaaatcccgattcaatggga
acgagtttagatatgctccgaagaacggctggtacactattgcatttggctcggcatcca
gataatcggccgctatttttacaacaagaacaacgtctgctcggtcttgtgatgagccac
attttagatcaacaagttgcattgatcatatcgagggtattgtttcaagtgtcacgtggc
ggtggtgcatgtgaatcgcctgcaaaaaaggtgaaacgacgtccgttaccacaaaattct
gccacaaaattagttccaaatactgaatcatcaattccagtgtcataa
DBGET
integrated database retrieval system
