Contarinia nasturtii (swede midge): 116344672
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Entry
116344672 CDS
T08003
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116344672
Membrane trafficking [BR:
cns04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
116344672
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
DUF5050
TFIIA
Med3
Motif
Other DBs
NCBI-GeneID:
116344672
NCBI-ProteinID:
XP_031629180
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MWSNLLANFMPKSGYRLVLVVVYYLVFTLSVCYSENVTSNAVIPNVSKSVNTSAITMQWP
TTAATAAAAAEKVETTTTTTINAESTSGIPPAKIESPLLKRLTTIRPNVATNSASSSSTN
GYHSKNTSTTLNAEKENSRNVRPKPKQTTTLQQQKQQQQQQQQQQSSQHKVLSWPSKPGG
TYLIEDKLQKLDPVPCNDHKFQCGDGSCIHISFVCDGEPDCQDQSDENPKECRIKDKPCD
ADKFKCKNGRCILRRWLCDRENDCSDGSDEDPEVCKKHVCTPEEFTCKSSDGECIPMSWV
CDGNPDCSNGSDEQTCNQTCRSDEFTCANGRCVQSRWRCDADDDCGDGSDELNCPKKRCK
DDDFKCGDGTCITQKWVCDMDPDCPDSSDERNCTYTQHISLSICPVNHYLCNDRLTCIAR
QWLCDGGIDCPNGDDESLENCQNKTCRDDQFQCNDLTCIPGHLMCSGLAECRDGSDEFNC
TAAIRKCDRATEFDCGGGMCIPNAKVCDQKVDCPGGQDEPKDKCSVNECKINNGGCQHKC
VDTPVGFYCECRNGYELQENTTCVDIDECKTPGICSQFCTNEIGSYKCECGKGYMRDPRH
HNKCKATEGHASLLFARRHDIRKISLEHNEMTSIVNNTKSATALDYVFRTGMVFWSDVSE
QRIYKAPIDEGNERIAVVKDSKVTADGLAVDWIYNHIYYSDTKRCAIDVTNFDGTMTKEL
IKDDIEIPRALALDPIRGLMYWTDWGSNPRIERAGMDGTQRQTIIQNNIKWANGLTLDLV
LNRIYWVDAKLNIISSCNYDGSDRRVILYSSEYLRHPFSITTFEDYVYWTDWDKAAVFKA
NKFNGSDIQAITAMRMLQHPMTIHVYHPYRQPDGINHCSAVNGHCSHLCLPAPQILARSA
KISCACPTGLKLLDDLQTCIEDGEKTSDVKVGNNQSSPEPSLPKSAENDSGTVALVAIAI
LTVILIIASVLLLWIYRYYVQHRTLTSMNFDNPVYRKTTEDQFSLEKNLSTRVYASSLDD
EIQEPLNKEPLNDFL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcaaatttgttagccaatttcatgccaaaatcgggatatcgtttagttttagtt
gttgtttattatttagtgtttactttaagtgtgtgttatagtgaaaatgttacatcaaat
gcagttataccaaatgtttcaaagtcggtcaacaccagtgcaatcacaatgcaatggcca
acaacagcggccactgcggcagcagcagcagaaaaagtagaaacaacaacaacaacaaca
atcaatgctgaatccacaagcgggataccacccgcaaaaattgaatcgccactgttaaag
agattgacaacgataagaccaaatgttgcgacaaacagtgcaagtagcagcagtacaaat
gggtatcattcaaagaacacaagcaccactttgaatgcagaaaaagagaacagtaggaat
gtaagaccaaagccaaagcagactacgacgttgcaacagcagaagcagcagcagcaacaa
caacaacagcaacaatcgtcacaacataaagtattatcatggccgtcaaaaccaggcgga
acatatttaatcgaagataaattgcaaaaattggatccagttccgtgcaacgaccataag
ttccaatgcggcgacggttcctgcatacatatatccttcgtttgtgatggagagcccgat
tgccaagatcaatcggacgaaaatcctaaagagtgccgtataaaagataagccatgtgat
gctgataaatttaaatgtaaaaatggtcgatgtattctccgacgatggttgtgcgatcga
gaaaatgattgctctgatggttcggacgaagatcctgaagtgtgcaaaaaacatgtttgc
acgcccgaagagtttacatgcaaaagttctgacggtgaatgcattcccatgtcatgggtg
tgcgatggaaatccagactgttccaacggatccgacgaacaaacatgcaatcaaacttgt
cgttccgatgaatttacttgtgcaaacggtcgatgtgttcagtcgcgctggcgctgcgat
gcagacgatgattgtggagatggaagcgacgaattgaactgtccaaagaaacgatgcaaa
gacgacgatttcaaatgcggcgatggaacttgtattacacagaaatgggtttgtgatatg
gaccccgactgccctgactcttctgatgaacgtaattgcacatatacgcaacacatttca
ttgtcaatttgcccagtaaaccattatttgtgcaacgatagattaacatgtatcgcaaga
caatggctttgcgatgggggcattgactgtccgaatggggacgacgaaagtttagagaat
tgccaaaataagacttgccgcgatgaccaattccaatgcaatgatttgacatgcattccc
gggcatttgatgtgctcaggtttggccgaatgtcgtgatggcagcgacgaattcaactgc
accgcagcgataagaaaatgcgaccgagcaaccgaatttgattgtggtggtggaatgtgc
ataccaaatgccaaagtttgtgaccaaaaagttgactgtccagggggccaggatgaacca
aaagacaaatgttcagtgaatgaatgtaaaatcaacaacggaggctgtcaacacaaatgt
gttgatacaccagttggattttattgtgaatgccgaaatggctatgagcttcaagagaac
accacatgcgttgacattgatgaatgcaaaactccaggaatatgctcacaattttgtacc
aacgaaattggttcatataagtgcgaatgtggaaaagggtacatgcgagatccaagacat
cacaataaatgcaaagcgaccgaaggacatgcatcattgttatttgctcgtcgacatgac
atacgaaaaatctcattggaacacaatgaaatgacatcgattgtgaacaatacaaaatcg
gccacggccctagattatgtattcagaacgggcatggtattctggagcgatgtatctgaa
caacggatttataaagcgccaattgatgaaggcaacgaaagaatagcggttgttaaagat
tcaaaagtaacggctgatggtttggccgttgattggatttataatcatatttattattcg
gacacaaagcgatgtgcaatcgatgttacaaatttcgatggtacaatgacaaaagagcta
atcaaagatgatattgaaataccgcgagcattagcattggatccaattcgtggtttaatg
tattggaccgattgggggtcaaatccgcgcatcgaacgtgctggcatggatggcactcaa
cgacaaactattatccaaaacaacatcaaatgggcaaacgggctcacacttgatttggta
ttaaatcgtatttattgggtcgatgcaaaattaaatatcatttcatcgtgcaattatgat
ggatccgatcgacgtgtgattttatattcgtcggaatatttgcggcatccgttttcaata
acaacatttgaagactatgtttattggactgattgggataaggcagctgttttcaaagca
aataaattcaatggtagcgacattcaagcaatcaccgctatgcgaatgcttcaacatcca
atgaccatccatgtatatcatccataccgacaaccagacggtattaatcattgttctgct
gttaatggccattgttcgcatttgtgcttgccagcaccacaaatactggcacgaagtgct
aaaatctcatgtgcttgtccaactggattgaaacttctcgacgatttacaaacatgcatc
gaagatggtgagaaaacatccgatgttaaagtaggaaacaaccaatcaagtccggagcca
tcattgccaaaatcagctgaaaatgattctggcacagttgctctcgttgctattgccatt
ctcaccgtgatattaatcattgctagtgtgcttctactctggatttatcggtactatgtt
caacatcgaacgctgacgtcaatgaatttcgataatccagtttatcggaaaaccactgaa
gatcaattcagtctcgagaagaatctatcgacacgagtgtacgcaagttcactagacgat
gagatacaagagcctctgaacaaagagccactcaatgactttttgtaa
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integrated database retrieval system
