Contarinia nasturtii (swede midge): 116344744
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Entry
116344744 CDS
T08003
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-like
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04080
Neuroactive ligand-receptor interaction
cns04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116344744
04082 Neuroactive ligand signaling
116344744
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cns04040
]
116344744
Ion channels [BR:
cns04040
]
Ligand-gated channels
GABA-A
116344744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116344744
NCBI-ProteinID:
XP_031629328
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MFPWKMDFCIVFYMFLFFHMYNIARCDHKAFTAAQLENITRTLTQMLEGYDIRLRPNFGG
DPLRVGMDLTIASFDAISEVNMDYTITIYLNQYWRDERLAFNTFTTFGDNSRSNDMLTLS
GDFSERIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGTLTYGMRFTTTLACQMDLHFYP
LDSQNCSVEIESYGYTMSDVLMYWQPTPVLGVFDTELPQFTILGFETNDRQEELATGTYQ
RLSLSFKLRRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTIST
GVRSSLPRISYVKAIDIYLVMSFVFVFAALLEYAAVNYTYWGARAKKKPKKNKTEYKVTG
KIATNKNEGCCSSSEDIIELQDVRMSPIASLRHRQYTCAVSATCGTIANNSEQADFSQFP
PSFRMVRNYGGVSSLSRSNPHYGVRYRHPNSANASCSKNPHKVRPKMFHAIRRGARILRK
SLPTIEDVNIIDKYSRCIFPISFLAFNAGYWIFYSLE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgttcccttggaaaatggacttttgcatcgtattttatatgtttttattctttcacatg
tacaacattgccagatgcgatcacaaagctttcactgcagcacaactggaaaatattaca
agaacattaacacaaatgcttgaaggatacgatattcgattgagacccaattttggaggc
gaccccctacgtgttggtatggatttgacgatagccagttttgatgccatatccgaagtg
aatatggattacacgataacgatttatctgaatcagtattggcgagacgagcgcttagca
ttcaatacgttcacaacatttggtgataattctcgtagtaacgatatgctcacattgtct
ggagatttttccgagaggatttgggttccagatacattctttgctaacgataagaatagt
tttttacacgatgtcaccgaacgcaataaattggtgcgtttgaatggtgatggcacttta
acgtacggcatgcggttcacaacaacacttgcatgccaaatggacctgcatttttaccct
ttagactcacagaactgtagcgtggaaatcgagagctatggttatacaatgtccgatgtt
ctcatgtactggcagccaactcccgtgctgggtgtcttcgatactgaacttccacaattc
accatattaggattcgaaacgaatgacagacaggaggaattggcaacgggaacctatcaa
cgcttgtcactgtcatttaaacttcgacgaaatattggatatttcatttttcaaacatat
ttacccagtatactcatagttatgttgtcttgggtgtcgttctggattaatcacgaggcg
actagcgccagagtagcattgggcatcactactgtgttgacgatgaccacgataagcaca
ggcgttcgtagttcgttgccacgaatatcgtatgtgaaagcaattgatatttatttggtg
atgagttttgtgtttgtatttgcggcattgcttgaatatgctgccgttaattacacatat
tggggtgctcgtgcgaagaaaaaaccaaaaaagaataaaacagaatataaagttacagga
aaaatagcaacaaacaaaaatgagggctgttgttcatcatccgaggatataattgaattg
caagacgttcgaatgagtccgatagcatcgttgcgtcatcgccaatatacatgtgccgta
agcgcgacatgtggcaccatcgccaataattcagaacaagcggatttttcacaatttccg
ccaagctttcgaatggttcgaaactatggtggagtgtctagcttgagtcgaagtaatcca
cactatggtgttcgttatcggcatcccaatagtgcgaatgcatcttgttcaaagaatcca
cataaagtccgaccaaagatgttccatgcaattcgacgcggtgcacgcatactccgaaaa
tcattgccaaccattgaagatgtcaatattattgataaatattctcgttgcatatttcca
attagttttcttgcatttaatgcaggctattggatattctactcattagaataa
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