Contarinia nasturtii (swede midge): 116344750
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Entry
116344750 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116344750
KO
K08775
breast cancer 2 susceptibility protein
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03440
Homologous recombination
cns03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116344750
03460 Fanconi anemia pathway
116344750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cns04121
]
116344750
03036 Chromosome and associated proteins [BR:
cns03036
]
116344750
03400 DNA repair and recombination proteins [BR:
cns03400
]
116344750
Ubiquitin system [BR:
cns04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
116344750
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116344750
DNA repair and recombination proteins [BR:
cns03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
116344750
FA (Fanconi anemia) pathway
Downstream FA components
116344750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB1
BRCA-2_OB3
Motif
Other DBs
NCBI-GeneID:
116344750
NCBI-ProteinID:
XP_031629337
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MNRDDVIPPSPPVKLGKSRLSIRNSKSSHQKKKPRREILSERAKNLQQQKSILSIKSTDK
IDGGQCEKSSEDSVTDVKIHNVNIYIGLDDVSPEEKNRTMSMLNDFDILHHTKLIEECNK
FDLLSHSQNFNVSQTLSQTHGLVSVKDLLLSSQNVSSVESNDELSAHISSPSLLGSLVDR
EARDVSLENIQFSEWQNQSKGDTSMNEQANCSNQSPVNERTIRSFNEYSTSQYERIETIQ
SDMEAMTFVESILDDFNDDESEEEIARTPPVVLLRRPNRKTYDRIHVARVKVLTFDDDDN
NKEGPTNDDLPNEFDVESTQYTQDIDVVLNDSRRILENLTQLNTYFTQPQSYQLDFSTDL
SHNTVTLDEEFKEFAYDSDDFVSVAEHNDFEKIVDTPNNSKRSTGNNRRLENTIASNRLF
EDCDEVADTTNDVNYHNPSIQLLDDDGDDIFVNINTPKIVNRCRAQNQQSVSTPFSLIKG
RIGDTMHMHSTPSTSKQSISIEQRIPKRLHFGAEFGRPERNPENLFKNSSSVNGFVTARG
TSIEMTAAQMKRTASIFADIDEKYNQIDPVLEEKPIAKKFKHSSETESFQNSTSHQGNMK
SMNSRCEGFRTMGSSKLVPKSIAKTMTFFGEDFDFGKLKTDRCFKSSSNVAGTSFAGGFS
TAGGSNIQISTKKMEKYAQTLKEIDRNLRNEFKDDANLNENILACQTPLRKNNHSSTAFI
TSTPNPSSLIGIKGGLPITPNFTNDTTHCPLITPIVNNKAKDFDTYLDGDMAAALFETST
QRFQLETANKSDSSLNLNETITDDFQLLNDSVTDVEIDILKISDEIKFERKTALSKQQAQ
CLKKSHPIRRHYGSLFLQKMLDPKKLCELGTPKKYKHNELIELGVQSNVIDLNIDNVLEF
KFDMWKFYSDDVCRRNVDGIVMPDEMCLIMDENSRVGVKELTSAFLSCPSVDPKLVPDHW
IGNSLKWIMLKLASYERSYPHKFAGNGLTPENVLTQLKYRYGREIDDVKRSVIRRIVERD
DSAAKRMVLFVSRILNNSSACTLELCDGWYSIRSNVLDSVLSHAVTTGKITIGTKLIIQG
AEIIGFEEACSPLEMPISVALKITANSTRRARWYAKLGYCKEPWPFAISLNSVDGNGGLI
TRMRAYVLRIYPLIYAVKQQTENGQKTVFRSNKVEQRQNQKDDKKRLENVEKFYEEASII
IEKEYEEDRKASKRTKKKICDIDDGEELWNFMENSNDSIELDLSSTQHKLLEDYQTKRND
EMQNKISAIVREKLDSIKNATKSTPLQKIRLIDPVSPCATKTVILSIWNADESHPTMREN
TIIDVRYVTANGMRMKDVQLTTSGFTKIQQVQMSPSSTSHEPFKRKLFSLAEVNSQQFEP
YFNEVDTFGVVVKIEAVAPNYPFQLVYIADANKNMLCLKFWTNIQHHACDDIVQVNRCLM
ISQLEWRPIENAHRRTRNGIPHAFVTELTTFLVSPKVAERSLKLANLREEIDKIDPNQYV
EECCEKLKEYDQGNKENSISNISSKTLDTSLNRTTIAESPVGRNSSVLLEKINRLQSYGT
PPPIRKSYICAKPTPESLRKPFKTPSRLE
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagatgatgtgataccgccgagtccaccggtgaaattgggcaaatcacgttta
agcataagaaattccaagtcatcgcatcaaaagaagaaacctcgccgtgaaatactaagc
gaacgcgcgaaaaatttacagcaacaaaagagtattctttccattaaatcaactgataaa
atcgatggtggtcaatgtgaaaaaagttcagaggatagtgtaactgatgtaaaaatacat
aatgtaaatatttatataggactcgatgatgtatcgcctgaagagaaaaaccgtacaatg
tcaatgttaaacgattttgacatattgcaccacacaaaattaattgaagaatgtaataaa
ttcgatttgttgtcacactcacagaatttcaacgtgtctcaaacactttcacaaacacac
ggtttggtttcggttaaagatttattgttatcatcgcaaaatgtgtcatcagtcgaatcg
aatgacgaattatcagcgcacatcagctcaccaagcttattgggttctctagttgatcgt
gaggcaagggacgtatcacttgaaaatattcaattttcagagtggcaaaatcaaagcaaa
ggtgacacttcgatgaatgagcaagcaaattgttccaatcaaagtcctgtgaacgaacgc
acgattcgttcttttaatgaatactcaacgtcacaatacgaacgaatagaaacaatacaa
agtgatatggaagctatgacttttgttgagagcattttggatgattttaatgatgatgag
agtgaagaggaaattgcacgcacaccacccgttgtattgcttaggcgacccaatcgtaaa
acgtacgaccgaatacacgtggctcgagtaaaagttttgacatttgatgatgacgataat
aacaaagaagggccgaccaacgacgatctaccgaatgagtttgatgtcgaaagcactcag
tacacgcaagatatagacgttgttttaaatgatagtcgacgtattctggaaaatctgaca
caacttaatacatatttcacacaaccacaatcatatcaattggatttcagcacagattta
tcacataatacggttacactcgacgaagagttcaaagaattcgcgtatgactcggatgat
tttgtaagtgttgcggaacataatgactttgaaaagatcgttgatacgccaaacaattcg
aaacgctcaacgggaaacaatcgacgattggagaataccatagcatcaaatcgactattt
gaggattgtgatgaggttgctgacacgacaaatgacgtgaactatcataatccatcgatt
caattgcttgacgatgatggtgatgatatttttgtaaatatcaatacaccaaaaattgtg
aaccgttgccgagcgcaaaatcaacagtcagtttcaacgcctttttcattgatcaaaggg
cgtattggagacacaatgcacatgcattcgacaccatcaacatcgaaacaatcgatatca
attgaacaacggataccaaaacgattacattttggcgctgaattcggtcgtccggagaga
aatcccgaaaatttgtttaaaaattcgtcatcagtgaatggttttgtaactgctcgtggc
acatctattgaaatgacagccgcacaaatgaaacgaacagcgagcatatttgctgacatc
gacgaaaaatataaccaaatcgatccagttttggaagaaaaaccgatcgcgaaaaaattt
aagcattcaagtgaaacggagtcatttcaaaattcgacttcacatcaaggtaacatgaaa
agcatgaattcaagatgtgaaggttttcgaacaatgggctcaagcaagttggtgcccaaa
tctatagcaaaaaccatgacatttttcggtgaagattttgattttggcaagcttaaaact
gatcgatgttttaagtcatcatcaaatgtagctggtacaagttttgcgggagggttttca
acagccggcggttcaaacattcaaatttcgaccaaaaaaatggaaaaatatgctcaaact
ctcaaagagatcgatcgaaatttgcggaatgaatttaaggatgatgccaatttgaatgaa
aatattctagcttgtcaaacaccattaaggaaaaacaatcattcatcaaccgcatttata
acgagcacacccaatcccagttcattgattggtatcaaaggtggtcttccaatcacgcca
aacttcaccaacgacaccacacactgtcccctaatcacaccgatcgtcaacaataaagcc
aaagattttgacacttatctcgatggtgacatggctgcggccctgttcgaaacaagtacg
caacgttttcaattggaaacagctaataaaagcgactcatcgctgaatttgaacgaaaca
attacagacgattttcagttactcaatgacagtgtcaccgacgtagaaattgatatattg
aaaatatccgatgaaattaaattcgaacgaaaaactgcgttgagcaaacaacaagcacag
tgcttgaaaaaatcacatccaattcgtcggcattatggttcgctttttttgcagaaaatg
ttagatccgaagaaactctgcgaattgggcacaccaaaaaagtacaaacacaatgaattg
attgaattgggtgttcaatcgaatgtcatcgatctgaatattgacaatgtgcttgaattc
aaattcgatatgtggaaattttattcggatgatgtgtgccggagaaatgtcgatggaatc
gttatgccagatgaaatgtgtctgatcatggacgaaaattcacgagttggagtcaaagaa
ttgacaagcgcatttcttagttgtccatcagtcgacccgaaactagtgccagaccactgg
attggcaattccttaaagtggatcatgctgaaattggcaagttacgaacgatcatatcca
cataaatttgctggaaacggtctcacaccggagaatgttttaacacaactcaagtaccga
tatggtcgtgagattgacgatgtcaaaaggtctgtaattcgaagaatcgttgaacgtgat
gactcagcggccaaacgcatggtactatttgtcagtcgcatattaaacaatagctcagca
tgtacgctcgaattatgtgacggatggtattcgattagatcgaacgttttagattcagtt
ttatcgcatgcagtgaccactggtaaaattaccatcggaaccaaactaatcattcaaggg
gctgagattattggatttgaagaagcgtgtagcccacttgaaatgccaatttcggtggct
ttaaaaataacggctaattcgaccagaagagcaagatggtatgcgaaattaggctactgc
aaggagccatggccgttcgccatatcactgaactccgtcgatggaaacggtggcttaatt
acacgaatgagagcatatgtcttacgaatctatcccttgatttacgcagtaaaacaacaa
acagaaaacggacaaaaaactgttttcagatcgaataaagtagaacaacgacagaatcag
aaagatgacaaaaaacgcttagaaaacgttgagaagttctatgaagaggccagcataata
attgaaaaagaatatgaggaagatcgaaaggcatcaaagcgaacgaagaagaaaatttgt
gatattgacgatggagaagagctgtggaatttcatggaaaattcaaatgacagcattgaa
ctggatttatcatcaactcagcacaaactattggaggattatcaaacgaaacgcaacgac
gaaatgcaaaataaaatcagtgcgatagttcgagagaaattggattcaattaagaatgca
acgaaatcgacaccattgcaaaaaatacgattgatcgatccggtatctccgtgtgcaaca
aaaacggtgattctgtctatttggaatgctgatgagtcgcatcccacaatgcgtgaaaac
acaattatagatgttcgctatgtcacggcaaatgggatgcgtatgaaagatgtgcaattg
acgactagtgggtttactaaaattcagcaagtgcaaatgtctccatcatcgacgtcacat
gaaccattcaagcggaaattgttctctcttgctgaagtcaattcacaacagttcgaacca
tatttcaatgaagtggatacatttggtgttgtcgtaaaaatcgaagccgttgcaccaaat
tacccatttcaattggtatacattgccgatgccaacaaaaatatgctctgtctcaaattt
tggacaaatattcaacatcacgcttgcgatgatatcgttcaagtcaatcgatgtttaatg
ataagtcaattggaatggagaccaatcgaaaatgcacatcgacgcactcgaaatggtata
ccacatgcatttgttaccgaactcactacattcttagtgagtccaaaagtagcggaacga
tcattgaagctagccaatcttcgtgaggaaattgataaaattgacccgaatcagtacgta
gaagaatgctgtgaaaaattaaaggaatatgaccaaggcaacaaagaaaattcaatttca
aacatatcgtcaaaaacactagacacaagtctgaatcgaacaactatcgcagagtcaccg
gtgggtcgaaattcttcagtgcttctggagaaaataaatcgtctgcaaagctatggtact
ccacctcctattcgaaagtcatatatttgcgctaaacctacgccagagagtttacgaaag
ccattcaaaactccatcgagattggaatag
DBGET
integrated database retrieval system
