Contarinia nasturtii (swede midge): 116344828
Help
Entry
116344828 CDS
T08003
Name
(RefSeq) slo-interacting protein 1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cns04121
]
116344828
Enzymes [BR:
cns01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116344828
Ubiquitin system [BR:
cns04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
116344828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
116344828
NCBI-ProteinID:
XP_031629472
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MAGMNFIILKVNGKDVSNLAHEDAVNAFLRAEEPILVEVKRRQNDAPSMTQPTEQSTSNS
NVISSGGRGTAINESSAVSKLSSGKSILFGTPQLDEQRKSIETTSIAIQTELMLCDFDNE
YICQSNDSPIRDEPHLNSSEINHSHDQHSSIINNNNNNNNNNNGHHHSLHHCTMLNECIV
PPEIDIEEVTLRKNNSEERIGLTVSYSSGNGSGSGSDDADTCTEVYISDIAENSVAARDG
RLRQGDQILQVNGRDVSSKEDAETLFSENKNAVTLLVSRSLYTSEEFSDNDNADYFDDCE
RIHNTMYQNGYLQHVFNSSTLPASASTEMMCEMTTGASTNDNNQNISESLCKSGNHDTNN
IKNTNTLSSKSSSSNQSELLNLLPNYQPRWHHQLMHSSFAVRNPLHPSIIKAHLESVNHE
IAQLDSRIESILLKQHQAMNQQAIAEAAEINASTIYRNPVDTMVNFNESDLKSNASTTAT
SSANNTTVISASPTAALDNKLSSMSVSNGSGQTVAAVAAAAPPTANVIKPPSSAPRRYPT
QYPPQIDSDTEHIYETIPEDSESEPIYCSPYKGETDSEQNLVHEWLNMKDEQKVRCIDSK
TGNWTRSTKSNSSVEDHENSSSAYNTGGSCNSNHQLTLELSDTNNDDGNKTLVFCPMKHL
QPKFPGQQHDSKSPTIRQSTSAIKKEKVMSPTHNRRSDFHNEQQTATRKSHSNNQDSSTV
RCDPNAPASVPGGGDTMYTNLANLQQTMLLQQRMFLQALCQQNSIVKTANQKNNDVQNDP
AKKNFIAPSLSQYRFVSGQQAYTHTIQPQPSEERMEWKVKRRVDGSRYIVRRPVRNRTLR
AARASKINEERANDQTTEDDTISEVKMGRYWTKEERKKHMEKSKERRHRQESIIASKNQQ
IQESSYAPPAQYYHLQTQQPTQATTAVIDKKTLKKKKESTMNAMTGATTPHDTNMQIVTN
RNSNVATTTATAVDVSKLSGILSVTTV
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggccggaatgaatttcattattttaaaggtgaatggcaaagacgtcagtaatttggca
catgaggatgcagtaaatgcatttttaagagccgaagaaccaatactagttgaagtaaag
cggcgccaaaacgatgcaccatcaatgacgcaaccaacagagcaatcaacatcgaattca
aatgtaattagcagcggtggaaggggtacagcgataaacgaatcgtcagcagtgtccaaa
ttatcaagtggaaaatcaattctattcggtacaccgcaattagatgagcaacgaaaatcg
attgaaaccacatcgattgccatccagacggagcttatgttgtgcgactttgataatgaa
tacatttgtcaaagcaacgactcaccaattagggacgaaccgcatttgaatagcagtgaa
ataaatcacagccatgatcaacatagcagcattataaacaacaataataataacaataac
aacaacaacggacatcatcactcattgcaccattgcaccatgttaaacgaatgcattgta
ccgcctgaaatagatatcgaggaagtcacgctacgtaaaaataatagtgaagagcgaatc
ggattaacggtgagttacagttcgggaaatggctctgggtccggctcagatgatgcggat
acctgtacggaggtatacattagtgatatagctgaaaatagcgtagctgcaagagatgga
cgcctacggcaaggagaccaaatcttacaagttaatggacgtgatgtatcgtccaaagag
gatgctgaaacactattttcggaaaataaaaatgctgttacattacttgttagccgaagt
ttgtacacgagcgaagaattctccgacaatgataacgctgactattttgatgattgtgaa
cgaattcataatacgatgtaccaaaatggttatttgcagcacgtttttaatagcagcaca
ttgcctgcatcagcatcgaccgaaatgatgtgtgagatgacaacgggcgctagtactaat
gacaacaatcaaaatatttcggaatcactctgcaagagcggcaatcacgatacaaacaat
atcaaaaataccaacacattgtcatccaagtcatcgagctcgaatcaatcggaactgtta
aatctattgccaaactatcaaccgaggtggcatcatcagctaatgcattcatcgtttgca
gtgcgaaatccgttgcatccatcgattatcaaagctcatttggaatcggtgaaccatgaa
atcgcccaattagattcgcgcattgaaagtatcttattaaaacaacatcaggcaatgaat
caacaagcgattgcagaagcagccgagataaatgcatcgactatttaccgaaatcccgtt
gacacaatggttaatttcaacgaatccgatttaaaatcgaatgcatcgacgacggctaca
tcatctgcaaataatacaactgtgataagcgcatcgccaacggcagcattagacaataaa
ctttcaagtatgagcgtttcgaatggtagtggccaaacggtagcggcggtggcggcagca
gcaccaccaacagcaaatgtaataaaaccaccttcttctgcaccacgtcgttatccgaca
caatacccaccacaaatcgattctgatacagaacacatttacgaaacgatccccgaagat
tccgaatcggaaccaatttattgttcaccatataaaggcgaaacggattccgagcaaaat
ctagtgcatgaatggctaaatatgaaggatgaacaaaaagttcgatgcatcgatagcaag
accggcaattggacaagaagcacaaaaagcaattcaagtgtcgaagaccatgaaaacagt
tcgagtgcatataatacaggaggttcatgtaatagtaatcatcaactaacattggagttg
agcgacacaaataacgatgatggcaacaaaacgcttgtattctgtcccatgaagcatctt
caaccgaaattcccagggcaacagcacgattcgaaatcaccgaccatccgacaatcgacc
tcagccattaaaaaggaaaaagtgatgagcccaacacacaatcgacgatcagattttcat
aatgaacaacaaaccgccacaaggaaatcccattcaaataatcaagattcgtctaccgtt
cggtgtgatccaaatgcaccggcttctgtgccaggcggtggtgatacgatgtacacgaat
ttggcgaatttacaacaaacaatgctgctacaacagagaatgtttttgcaagctctttgc
cagcaaaattcaattgtaaagaccgcaaatcaaaagaacaatgatgtgcaaaacgatccg
gccaaaaagaattttatcgctccgagtttaagtcaatatagatttgtcagtgggcaacag
gcatacacacatacaatacagccgcaaccaagcgaagagcgaatggaatggaaagtcaag
cgtcgggtcgacggaagtagatatattgtacgacgaccggtacgaaatcgaaccctacgt
gcggcgcgtgcatcaaaaatcaacgaagaacgagccaacgatcaaaccaccgaagatgat
acaatatctgaagtgaaaatgggccgatattggactaaagaagagcgcaaaaagcatatg
gaaaagtcgaaagaacgccgtcaccgacaagaatcgataattgcatcaaaaaatcagcaa
atacaagaaagttcatatgcaccaccagctcaatattaccaccttcaaacacaacaaccc
acccaagccacaactgccgtcatcgacaagaaaacattgaagaaaaagaaagaatcaaca
atgaatgcaatgactggagccaccaccccacatgacacaaacatgcaaattgtcacaaat
cgaaatagtaatgttgccacaacgacggcgacagccgttgatgtgtcaaaattatcggga
attctttctgtgaccacagtataa
DBGET
integrated database retrieval system
