Contarinia nasturtii (swede midge): 116344873 Help Entry 116344873         CDS       T08003                                  Name (RefSeq) neurobeachin isoform X1   KO K24183   neurobeachin Organism cns  Contarinia nasturtii (swede midge) Brite KEGG Orthology (KO) [BR:cns00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cns04131]     116344873 Membrane trafficking [BR:cns04131]  Protein recycling   Rab GTPases and associated proteins    Rab4 associated proteins     116344873 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DUF4704 Beach DUF1088 NBCH_WD40 PH_BEACH WD40 Neurobeachin Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd NICE-3 Motif Other DBs NCBI-GeneID:  116344873 NCBI-ProteinID:  XP_031629553 LinkDB All DBs Position Unknown AA seq 3284 aa AA seqDB search MDSIERIIRANPLPAILPNGNGENSRRALVHASLATAVGRKGRHLTGTFCLTGDTMEGII QCLVFLKAFSLVGGEFDMELNFVIQDAQNIKHMLELLDHCPPNLQAEIWSVFIAILRKSV RNLQACTDVGLIEHVLMRLQRAETVVADLLIEMLGVLASYSITVKELKLLFGAMKAMNGK WPRHSAKLLNVLRQMPHRNGPDVFFSFPGRKGSGVVLPPLAKWPYENGFTFTTWFRLDPI NSVNIEREKPYLYCFKTSKGVGYTAHFVGNCLVLTSMKVKGKGFQHCVKYEFQPRKWYMI AIVYIYNRWTKSEIKCLVNGQLASSTEMAWFVSANDPFDKCYIGATPELDEERVFCGQMA AIYLFSEALTTQQICAMHRLGPGYKSQFRFDNECYLNLPDNHKRVSVATASSAEPLPSTA SCSTSITGEVIDSSTDLSSIAALNAFLPNIAAIPLTEASVAPTATTPSSLNANNSAIDEH CFASVLYDGKLSSAIVFMYNPVATDGQLCLQSAPKGNVSYFVHTPHALMLQDVKAIVTHS IHSTLNSIGGIQVLFPLFSQLDMPYDGCSDIKRDPALCSKLLGFICELVESSQTVQQHMI QNRGFLVISFMLQRSSREHLTLDVLSSFLSLTKYLVTCLSANSDLLLKQLFCFSFLTWQL LDHVLFNPSLWIYTPANVQARLYSYLATEFLSDTQIYSNVRRVSTVLQTVHTLKFYYWVV NPRAKSGIVPKGLDGPRPAQKDILTIRAYILLFLKQLIMIGNGVKEDELQSILNYLTTMH EDENLHDVLQMLISLMSEHPSSMVPAFDVKQGVRSIFKLLGAESQLIRLQALKLLGFFLS RSTHKRKYDVMSPHNLYTLLAERLLLYEESLSLPTYNVIYEIMTEHISQQVLYTRHPEPE SHFRLENPMILKVVATLIRQSKQTEQLLEVKKLFLSDMTLLCNNNRENRRTVLQMSVWQE WLIAMAYIHPKNSEEQKISDMVYSLFRMLLHHAIKHEYGGWRVWVDTLAIVHSKVSYEEF KLQFAQMYEHYERHRTDNITDPALRRAHPISTISGWDRDHDQSTENSTKNGQVSNDKAIT NPLANESQSEQPYKVSKSEQTDDVDVVGLENVKCVCEESSNQDEMNLSNSTDTAKEPSAQ IFNSNESNKPMQSISSISQVYNEQLTGQSIVCNGDSEHAFGDDDDDDTTNTSTKQVNANG DGSTSDLNALRKTLEIDSYDMNEANSKEIVDEIVEEILTKSEHLLDDCKRSLDENHQHLD ETESTSSPVIKDEEIEHAVSEVVKGVRNIERKVKRDSENDTDSPNTETDAKVNQTEQQNV EHLTISPSSESFELQNENQKTELAVSNAAIGETNNILNDDIEDNANIPIEKTTSTNTETD EIKDIVTTIVNDVIENCVNQTVTDNVGACDNDVNMSIIDNINNNSSEVTTNDNNDNAIIV DDTITQTTEIVSTLNAPTNEAMTEETNEEIIKGIVNEIVDKCVESESEAIIDNDDNNNEE DITPNKAANETIISDAASESSNGEQINSAKFTPATTTEKPDNSDDNTAQTNDNRNNKPNR SQGTSISTSTQVENNHFDQRQNRSKSTSNRPMFSPGPSRPPFRIPEFKWSYIHQRLLSDV LFSLETDIQVWRSHSTKTVLDFVNSSENAIFVVNTVHLISQLADNLIIACGGLLPLLASA TSPNSELDVLEPTQGMPLEVAVSFLQRLVNMADVLIFASSLNFSELEAEKNMSSGGILRQ CLRLVCTCAVRNCLECKERTRYSNGGLPRDVPGAAHLQALIRGAQASPKNIVESITGPLS PVKDVEKLLQDMDVNRLRAVVYRDVDETKQAQFLSLAIVYFISVLMVSKYRDILEPPAEP SVRASPVAQRIPQNQETSARPLFPQWSHHVYPQFLPGSHPNYQNSTNMHHNHSNNLNMPR ISSPSTPTTTPTSTTNLSQTVLNSSKAQPNHHLHNHYHYPLHLQNNSHHQQQQQQQIHRN HTHMNGATSSHIRNRNHNNNASHKNIILNNNDYQFRTDSGQRNIQDGDYEVIVVDENNSS VLADDSHSSGPPSIKQPPTISKQVSSPTLFVPVSTNIQPLSPPKPFPIAPLPVNTIKTIE KKSVDSDGASLNMNSTENDVHETSSEIMNDDNKPTNSNDESWTDVNLNEDGSDRIRDIEG NIHHLQRGEKPDSEISVVRVPDNYTMNASRSHRPEDMQMKPPLMGQLPLSTPSREASLTQ KLEVALGPVCPLLREIMVDFAPFLSKTLVGSHGQELLLEGKGLTTFKNSQSVVELVMLLC SQEWQNSLQKHAGLAFIELINEGRLLSHAMKDHIVRVANEAEFILNRMRADDVLKHAEFE AQCAQTLLERREEERMCDHLITAARRRDNVIASRLLEKVRNIMCNKHGAWGETSGTVSKQ IFWKLDAWEDDARRRKRMVQNPRGSTHPQAALKAALENGAPDDAISQAREEFHSQIANTR SQHGTAHSGDLLDDAELLIEDRELDLDLTGPVNISTKAKLIAPGLVARGTVSITSTEMYF EVDEDCEEFQKIDPDVIKYCDHLHGKWYFSEVRAVFSRRYLLQNIALEIFLASRTSILFA FPDQHTVKKVIKALPRVGVGIKYGIPQTRRASMMSPRQLMRNSNMTQKWQRREISNFEYL MFLNTIAGRTYNDLNQYPIFPWVLTNYDSKELDLSQPSNYRDLSKPIGALNPSRREYFEE RYESWENDTIPPFHYGTHYSTAAFVLNWLIRIEPFTTMFLALQGGKFDHPDRLFSSISLA WKNCQRDTSDVKELVPEWYFLPEMFYNSSSYRLGTREDGVTVNDVELPPWSKSPEEFVRI NRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRATNVFYYLTYEGSVELDSITDVVMKEA IENQIRNFGQTPSQLLMEPHPPRSSAMHLSPMMFSAMPDDICMSMKFHLNSPIIHISANT YPQLPLPSVVTVTAGHQFAVNRWNCNYTGAVQGPSYAESNQNQNANLPLTMDPVLLQTNG NNSAVRRHLGDNFSQKLKIRANCFVTTVDSRFLIACGFWDNSFRVYLTETAKIVQIVFGH FDVVTCLSRSECNITSDCYIASGSADCTVLLWHWNARTQSIVGEGEVPTPRATLTGHEQA VTAVVISAELGLVVSGSISGPVLIHTTFGDLLRSLEPPSDFISPELISMSREGFIVVSYD KGNVAAYTINGKRLRHESHNDNLQSMILSRDGEYLMTAGDRGIVEVWRTFNLAPLYAFPA CSSGIRSLALTHDQKYLLAGLATGSIIVFHIDFNRWHHEYQQRY NT seq 9855 nt NT seq  +upstreamnt  +downstreamnt atggactcaattgaacgaataatacgtgcaaatccattgccggcaattttaccaaatggt aatggagaaaattctcgacgagcacttgtgcatgcgtcattagccacagctgttggtcga aaaggacgtcatctaactggtacattttgtctaactggcgatacaatggaaggcattatt caatgtctcgtttttctcaaagcgttttcgcttgttggaggtgaatttgatatggaactg aatttcgtgattcaggatgcccagaatatcaagcacatgctggagctattggatcattgc cccccgaatttacaggcggaaatatggagcgtatttatagcgatattacgtaaaagtgta cgtaatttacaggcgtgcaccgatgtaggattaattgaacacgttttaatgcgactgcaa cgtgccgaaactgttgttgctgatttactgattgaaatgttgggagtgttggcaagttat agcataacagtgaaagagcttaaattattattcggcgcaatgaaagctatgaacgggaaa tggccgcgtcattcagccaaattactaaacgttttgcgtcagatgcctcatcgaaatgga ccagatgtgttttttagttttcctgggcgcaagggatcgggtgttgtgttgccaccgcta gcgaaatggccgtatgaaaatggctttacgttcacaacgtggtttcgactggaccccatc aattccgtcaacatcgaacgagagaaaccgtatttatactgtttcaaaacatccaaaggc gttggatatacagcccactttgttggaaattgtttagtattgacgtcgatgaaagtaaaa ggcaaaggctttcaacactgtgttaaatacgaattccagcccagaaagtggtatatgata gccattgtttatatatacaatcgatggactaaaagtgaaataaagtgcctcgttaatggt caattagcatcaagtacggaaatggcgtggttcgtttcggctaatgatccatttgataaa tgttatattggtgcaacacctgaattggatgaggaacgtgtattctgcggtcaaatggca gcaatttatttatttagcgaagcgttaacaacacaacaaatttgcgcaatgcatcgacta ggtcccggttacaagtcccaatttcgattcgacaacgagtgctaccttaatttaccggac aatcataaaagggtgagtgttgcaacagcttctagcgctgaaccattaccttcaaccgct tcatgttcgacgtctataactggtgaggtgatcgatagtagcaccgatttatcatcgatt gccgcacttaatgcatttttgccgaacatagctgctataccattaacggaggccagtgtg gcacctactgctactacacctagtagccttaatgccaataattctgctattgatgaacat tgttttgcatccgttctttatgacggaaagctatcaagcgcaattgtatttatgtacaat ccagtagcaaccgatggccaactgtgtttgcagtctgctccaaaaggaaacgtttcatat ttcgtgcatacgccacatgctttgatgttacaggacgttaaggctatcgtaacacattca attcatagtactttaaattctatcggggggatacaagtcctttttccattattttcacaa ctggatatgccatacgatggttgtagtgatataaaacgagatccagcattatgctccaaa ttactaggctttatatgtgagttagttgaaagttcacaaaccgtgcagcagcacatgata cagaatcgtggattccttgttatatcgttcatgttacaaagatcatcgcgtgaacacttg acactcgatgtacttagctcgttcttaagtttaacaaaatatctggtgacctgtctgtcg gcgaacagcgatttgttgctaaaacaacttttctgtttttcatttttaacgtggcagctg ctggatcatgtgctctttaatccatcgctgtggatctatacaccggcaaatgtacaagca cgtctctattcgtatttggccaccgaatttttgagcgacacccaaatctacagcaatgtg cgtcgcgtcagtactgttcttcaaaccgttcacacgcttaaattttactattgggttgtg aacccacgagcaaaaagcggaatcgtaccaaaaggattagatggtccacgtccagcacaa aaagatatcctcactattcgagcgtacattttgctatttctgaagcaactcattatgatt ggcaatggtgtgaaagaggatgagttgcagagcattttaaattatttaaccacaatgcac gaagacgaaaacttacacgatgtacttcaaatgttgatatctttgatgtcggagcatccg agctcaatggtaccggccttcgatgttaaacaaggtgttcgaagcatattcaaattgctg ggagccgaaagtcaattaatccgattgcaagcgctaaaactattgggattcttcttgtca cgtagcacacacaaaagaaaatatgatgtaatgtcaccgcataatttgtacacactactg gctgaacgattgctactctacgaagaatcactgtcgttgcccacatataatgtcatttat gaaatcatgacggagcacatctcgcagcaagttttatacacaagacatccagagccagaa agccatttccgtctcgaaaacccaatgatcctgaaagtagtcgccacacttattcgacaa tcaaaacaaaccgagcagttgcttgaagtgaaaaaactattcttatccgatatgacgttg ctatgcaataacaatcgtgaaaatcgacgtaccgtactgcaaatgtctgtgtggcaagaa tggcttattgccatggcttacattcaccccaagaatagtgaagaacaaaaaatatccgat atggtttactctttattcaggatgcttttacatcacgcaatcaaacacgaatatggtggc tggagagtgtgggtcgacacactagcaatcgttcattcaaaggtttcgtatgaagaattc aagcttcaatttgctcaaatgtatgagcattatgagagacatagaaccgacaatataacc gacccagcactaagacgagcacatccaataagtacgataagcggttgggatcgtgatcat gaccaatcaactgagaattcaacgaaaaatggtcaagtatcaaacgataaagcaattacc aacccactagcaaatgaatcacaatcggaacaaccgtataaagttagtaaaagcgaacaa actgatgatgttgatgtggttggtttggagaatgtaaagtgtgtgtgtgaggagagttcg aatcaagatgaaatgaatctatcgaatagcacagacacagccaaagagccatcagctcaa atttttaattccaatgaatcaaataagccaatgcaatcaatttcaagtatttcacaagtg tataatgaacagttaacgggacaatcgattgtttgtaatggtgattcggagcacgcattt ggtgatgatgatgatgatgacactacgaatacatcaaccaaacaagttaatgcgaatggt gatggtagcacatccgacttaaatgcactacgcaaaacacttgaaatcgatagctacgat atgaacgaagcgaattcaaaagaaattgtcgacgaaattgttgaggagatattgacgaaa agcgaacatttactggatgattgcaagcggtcattggatgaaaaccatcaacatttggac gaaacggaaagcacatcatcgccagttataaaagatgaagaaatcgagcatgctgttagt gaggtggtgaaaggtgtacgaaatattgaacgaaaagtgaaacgtgatagtgaaaatgat acggattcaccgaataccgaaacggatgcgaaagtaaatcaaaccgaacagcaaaatgtc gaacacttaactatatcaccgagcagtgaatcatttgagctacaaaatgaaaatcaaaag actgaactagcggtatcgaatgcagcaataggtgaaaccaataatattttgaatgatgac attgaagacaatgcaaatattccgattgaaaaaacgacgtctacaaatacagaaaccgat gaaataaaagacatcgtcacgactattgtgaacgatgtgattgaaaattgcgtaaatcaa accgtcacagacaatgttggcgcatgtgataatgatgtgaatatgtccataattgataac atcaacaataatagttccgaagtaaccacaaacgataacaatgataatgcgataattgtc gatgacacaattactcaaactaccgaaattgtgagcacactgaatgcaccaacaaatgaa gcgatgaccgaagaaacaaacgaagagataatcaaaggtattgtcaacgaaattgtcgat aaatgtgttgagagcgagagcgaagccattatcgataatgatgataacaataatgaggaa gatattacaccgaataaagcagcgaatgagacaatcatctcagatgctgcaagtgaatca tcaaatggcgagcagataaatagtgccaaatttacaccggcaaccacaaccgaaaagcca gacaatagcgatgacaacaccgcccaaacgaacgacaatcgaaacaacaaaccaaatcga tcacaaggcacatcgattagcacaagtacacaagttgaaaacaatcatttcgaccaaaga caaaaccgctccaaatcaacttccaatcgaccaatgttcagcccgggaccatcacgccca ccattcagaattccagaattcaagtggtcgtacatccatcaacgacttttgtcagacgta ctattttcacttgaaactgatatacaagtttggagaagtcattcaacaaaaactgtcttg gactttgttaactcaagtgaaaatgcaatctttgtcgtcaacactgtacatctaatatca cagttggctgataatttaataattgcttgcggtggtctattgccattgctggccagtgca acttcgcccaactctgaactagatgtgttggaaccaacgcaaggcatgccattggaagtg gctgtttcatttttacaacgtttggttaacatggctgacgtgttgatttttgctagctca ttgaatttcagtgaactggaagccgaaaaaaatatgtcaagtggtggcatattgcgacaa tgtctacgattggtgtgcacatgtgccgtgcgaaattgtcttgaatgtaaagaacgaaca cgatattcgaacggcggtttgccgcgtgatgttcctggtgctgctcatttgcaagctctg attcgaggggcccaagcatctccaaagaatattgttgaatcaatcactggtcctctcagt ccggtcaaagatgtagagaaactattacaagatatggatgtgaatcggcttcgtgctgtt gtttatcgggatgtggatgagacgaagcaagcacaattcttgtcgctggccatagtctat ttcatatcagtattgatggtgtctaaatatcgtgatatactggaaccacctgcagagcca tcagtgcgggcatcacctgtggcacaacgcatcccacaaaatcaagaaacatcagcaagg ccattgtttccgcaatggtcacatcatgtgtatccacaatttttaccaggttcacatcca aactatcaaaattcaacgaatatgcatcataatcacagtaataatctaaatatgccacgt atttcgtcgccctctactccaacaacaacaccaacgtctacaacaaatctgtcacaaact gttctcaattcctcaaaagcacaacctaatcatcatttgcataatcactaccattatccg ttgcatcttcagaataatagccatcatcagcaacagcagcagcagcaaatccatcgcaac catacacacatgaatggtgcgacatcatctcatattcgaaatcgcaatcacaataataat gcgtcacataaaaacattatactcaataataacgattatcaatttaggaccgattcaggg caacgaaatatccaagacggcgactacgaagtaattgtcgtcgatgaaaataattcatca gttttagctgacgattcacattcaagtggaccaccgtcaatcaagcagccaccaacaata tcaaaacaagtgtcatctccaacactttttgtacccgtatcaacaaatattcaaccacta tcgccaccaaaaccgttcccaatcgcgcctttgccagtgaatacaatcaaaacgatagag aaaaagagtgttgattcggatggtgcttcccttaacatgaattcaactgaaaatgacgta catgaaacatctagcgaaataatgaatgatgacaacaaaccaacgaattcaaacgatgaa agctggacagatgttaatttaaatgaagatggaagcgatagaattcgtgatattgaagga aatatccatcatttacaacgaggtgaaaagcccgattcggaaatatcagttgtacgtgtt cctgacaattatacaatgaacgccagtcgttcccatcgtcctgaggatatgcaaatgaaa ccaccgcttatgggccaattgccattgtcaacgccatccagagaagcaagtctaacgcaa aagctagaagtggcattgggaccggtgtgtccattattgcgtgaaataatggttgacttt gcgccatttttatcgaaaactttggtcggatcgcatggtcaagagctgttgctggaagga aaaggactgacaacattcaaaaatagtcaatcggtggttgagcttgtaatgttgctgtgc tcacaagagtggcaaaacagtttgcagaaacatgctggtttagcatttatcgaactgata aacgaagggcgattgttatcgcatgcaatgaaagaccacattgtacgtgttgcaaatgaa gctgaattcatattgaatcgtatgcgtgccgatgatgtgttgaaacatgctgaatttgaa gcacagtgcgcgcaaacactattggaacgtcgtgaagaggagcgaatgtgtgaccattta attaccgctgcccgtcgacgtgataatgtgattgcaagtcgactattagaaaaagttcgt aatattatgtgcaacaaacatggtgcatggggtgaaacaagcggaaccgtatcgaaacaa atattttggaagcttgacgcatgggaagacgatgcacgtcgtcgaaaacgaatggtacaa aacccaagaggttcaacgcatccacaggccgcactcaaagcggcacttgaaaatggtgca cccgatgatgctatatcacaggcacgcgaagaattccattcccaaattgcaaacacgcga tctcaacatggaacagctcatagtggtgatttgcttgatgacgccgagctgctcatcgaa gaccgtgaactggatttagatttaaccggtcccgtgaatataagcacaaaggccaaacta attgcaccaggtttagtggctcgcggtactgtttcgataacaagcactgaaatgtatttc gaagtcgacgaagactgtgaagaatttcaaaaaattgatccagacgttattaaatattgt gatcatttacacggaaaatggtacttctccgaagtacgtgctgtattttcccgccgatac ttgctacaaaatattgcattggaaatatttttagcatcacgcacatcgatactatttgcc ttccccgatcaacatactgtgaaaaaagtgatcaaagcattgccgcgtgttggcgttggc atcaaatatggaataccacaaacacggcgcgcatcaatgatgtcacctagacaactaatg cgaaactcgaatatgacacaaaaatggcaacgacgcgaaatttccaatttcgaatattta atgtttttgaatacaatcgccggtcgtacatataacgatttaaatcaatatccaatattc ccatgggttctcaccaactatgattcgaaggagctggatctcagtcaaccatctaattat cgtgatttgtcaaagccgattggtgcattgaatcccagtcgacgcgaatatttcgaagaa cgctacgagagttgggagaatgatacaattccaccatttcattatggcacacattattca acggctgcatttgttttaaattggttgattcgtattgaaccattcaccacaatgttcctt gcactacaaggtggtaaattcgatcatccggatcgattgttctcatcgatttcgttggca tggaaaaattgccaacgggatacatctgatgttaaagaattagttcctgaatggtatttc ttacctgaaatgttttataattcatcgtcataccgattgggtacacgtgaggatggtgtt actgttaatgatgttgagcttccaccatggtcaaaatcgcccgaagaatttgttcgcatt aatcgaatggctctcgaatctgaatttgtgtcatgtcaattacatcaatggattgattta atattcggctacaaacaacgcggacccgaagccgttcgtgccacaaatgttttctactat cttacgtatgaaggcagcgtcgaattagattcaataaccgatgttgttatgaaagaagcg attgaaaatcaaattcgtaattttggccaaacgccaagtcaattactgatggaaccccat ccaccgcgaagttcagcaatgcatttatcaccgatgatgtttagtgcaatgcccgacgat atttgtatgagcatgaaattccatttgaattcaccaatcattcacatatccgccaacact tatccacaattgcctctaccgagtgtggtcactgtgactgctggccatcaattcgctgtt aaccggtggaattgtaactacacgggcgctgtacaaggtccaagctacgctgaatcgaat caaaatcaaaatgcaaatttacccctcaccatggatccggttttattgcaaacaaatggt aacaattcggcagtgcgtcgacatttgggcgataattttagtcaaaaattgaaaattcgt gcaaattgtttcgttacaacggtcgatagtcggtttctaattgcgtgcggattctgggat aatagttttcgtgtttatttaacggaaacagcgaaaattgtacaaattgtatttggtcac tttgatgttgtcacgtgtttatctagatcagagtgcaatattacatccgattgctatatt gcatctggctcggccgattgtaccgttttactatggcattggaatgcacgaacacagagt attgttggtgaaggtgaagtaccaacgcccagagcaacattgactggacatgagcaagct gttaccgctgttgtaatcagtgctgagctgggattagttgtgtccggttcaataagcggc ccggttttgattcatacaacttttggagatttactacgttcattggagccaccaagcgat ttcatatcacctgaactgatttcaatgtctcgtgaaggttttattgtcgttagctatgat aagggtaatgtggctgcctatactattaacggaaaacgtttgcgacacgagtcacataac gataatctacagagtatgatactgtcgcgcgatggtgaatatctaatgacggcaggagac cgtggcattgttgaagtatggcgaacattcaacttggctccattgtatgcattcccggct tgtagcagcggtatccgttcattggcattaacccacgaccaaaagtacttattggctgga ctcgcaactggatcaatcattgtgtttcatattgattttaaccgctggcatcatgagtat cagcaacgctattaa

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