Contarinia nasturtii (swede midge): 116344976
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Entry
116344976 CDS
T08003
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns00061
Fatty acid biosynthesis
cns00071
Fatty acid degradation
cns01100
Metabolic pathways
cns01212
Fatty acid metabolism
cns04146
Peroxisome
Module
cns_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
116344976
00071 Fatty acid degradation
116344976
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116344976
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cns01004
]
116344976
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cns04147
]
116344976
Enzymes [BR:
cns01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
116344976
Lipid biosynthesis proteins [BR:
cns01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
116344976
Exosome [BR:
cns04147
]
Exosomal proteins
Exosomal proteins of breast milk
116344976
Exosomal proteins of breast cancer cells
116344976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
116344976
NCBI-ProteinID:
XP_031629734
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MFIEDDEHMESIWVQTAISAIRVIAFVCDVITFPVYLVLQQPWKRRQQSKRIKAKPISAD
DKQVTYRSVEPPREIHVKMVQANIDTLEKMLTYVAKIHTTKKCLGTREILSEEDEIQPNG
RLFKKYNMGEYKWRTFTDVENSATNFGRGLRELGQAAYKNIVIFAETRAEWMIAAHGCFK
QNIPIVTIYATLGDDGVIHGINETEASIVITSHELMPKFKTLLAKLPKVQTLIYMEDQLN
KTETDGFKDDVRVLPFNQVIRMGNASKTVAAPPSAEDIAIIMYTSGSTGTPKGVLLSHKN
CIATLKAFSDVIKVYPEDVLIGFLPLAHVFELLAESVCLLTGVPIGYSTPTTLIDTSSKI
KRGCRGDASVLKPTCMTTVPLILDRISKGINDKVNGQAPLQKAIFKFAYDYKKIWTQRGY
ETPILDKLIFKKISKLMGGKVRVMLAGGAPLSPDTHEQIKLCLCTDVVQGYGLTETTSGA
TVMDAKDMISGRVGGPTTMCDIRLCTWDEGGYRVTNKPHPQGEIIIGGDSVSQGYYKLEK
KTAEDFFEEDGRRWFKTGDIGEVHPDGVLKIIDRKKDLVKLQAGEYVSLGKVEAELKTCA
VVENICVYGDPSKQFTVALVVPNPKHLKELAIKQGVPDAEFEQLCSSPVMEKAVIKELAE
HARKCKLQKFEVPAAVTLCKEVWSPDMGLVTAAFKLKRKDIQDRYQHDINRMYAS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttcattgaggatgacgaacatatggagagcatttgggtgcagacggcgatcagtgcg
attcgcgttattgcattcgtttgcgatgtgattacgtttcctgtatatttagtcttgcaa
caaccttggaaacgacgacaacaatccaaacggatcaaagccaaacccatttcggctgat
gacaaacaagtaacatatcgttcggtggaaccgccacgtgagattcacgtcaaaatggtg
caagcgaatatcgatacattggaaaaaatgttaacatatgtggccaaaatacacacgacc
aagaaatgtttgggaaccagagaaattctgagcgaagaagatgaaatccagcccaatggt
cgtttgttcaaaaagtataatatgggtgaatacaaatggcgtacttttaccgatgtcgaa
aactcagcaacaaactttggtcgtggattacgtgaactgggccaggctgcatataaaaac
attgttatattcgccgaaactcgagctgaatggatgatcgctgcacacggatgtttcaag
caaaatattccaatcgtgaccatttatgcaactctcggtgatgacggtgttatccatgga
attaacgaaactgaggcaagcattgttatcacaagtcatgagctgatgccaaaattcaaa
acattgctggctaaacttccgaaagtacaaactttaatttatatggaagatcaattgaat
aaaactgaaactgacggctttaaagatgacgtacgtgtattgccattcaatcaagtgatt
cgcatgggcaacgcaagcaaaactgttgcagctccaccaagcgccgaagatatagccata
attatgtacacatcgggtagtacaggtactccaaaaggtgtattactatcgcataaaaat
tgcattgcaactcttaaagcattctccgatgtaatcaaagtgtatcccgaagatgttctc
attggattcttacctttggcccacgtttttgaactactcgctgaaagtgtatgtctattg
actggtgtaccaattggatattcaacgcccacaactcttattgatactagcagcaaaatt
aagcgcggctgcagaggcgatgcatcagtgctaaaaccaacctgcatgactaccgtaccg
ctcatcttagatagaatatcaaagggaataaacgataaagtcaatggccaggcaccattg
caaaaggcaattttcaagtttgcatatgactacaaaaagatctggacacaaagaggctat
gaaacaccaattttggacaaattgatcttcaagaaaatctcaaagttgatgggcggtaaa
gttagagtgatgttggccggtggcgctccattatcgccagacacacacgaacaaattaaa
ttatgtttatgtacagatgtcgttcaaggctacggattaactgaaacaaccagtggagcc
acagttatggatgccaaggatatgatttcaggacgcgttggtggtccgaccacaatgtgt
gatattcgcttatgcacatgggatgaaggtggttatcgtgtcacaaacaaaccacatcca
caaggtgaaattattattggcggcgatagcgtgtcacaagggtattacaaattggagaaa
aaaactgcagaagactttttcgaagaggacggacgaagatggttcaaaactggtgatatt
ggtgaagttcatcccgatggagtacttaaaattattgatcgtaaaaaggatttggtaaaa
ttacaagctggtgaatatgtgtcgctgggcaaagttgaagctgaattgaaaacatgtgcg
gttgtcgaaaatatttgcgtgtacggagatccatcaaagcagttcaccgttgcattagtc
gtaccaaatccaaaacatttgaaagagcttgcgatcaaacaaggcgtcccagacgctgaa
tttgaacagttatgctcatcacctgtcatggaaaaagcagtgataaaagaattagctgaa
catgctcgcaaatgtaaactacaaaagtttgaagtaccagccgctgttacgctatgcaaa
gaagtctggagtcctgatatgggccttgtaaccgccgcattcaaattaaaacggaaagat
attcaggatcgctatcagcacgatattaatcgaatgtatgcatcatga
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