Contarinia nasturtii (swede midge): 116344978
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Entry
116344978 CDS
T08003
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116344978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cns04121
]
116344978
Enzymes [BR:
cns01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116344978
Ubiquitin system [BR:
cns04121
]
Ubiquitin ligases (E3)
HECT type E3
116344978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF2541
Motif
Other DBs
NCBI-GeneID:
116344978
NCBI-ProteinID:
XP_031629740
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MFSFEGNYKRTPSQNLSGASHTNDRETLIRRAQHERQKRAEIRKQHTGAITIQSCVRSFL
SRVKCKKDAQQIFDQYLKTVGLTNPEQLEYLLRCILFFYDNKNEKDGERLIILCQFLIRH
PDNLLQKSITDPQWQHRVKKLLSLCIQQLSLQNLSHGIPFRTLETFSSDDIVSKYITDAN
VRRTYLESVYRYLVQRKYFKLVRQLLEEKIPPLYDVVLSPPNSISETLLQMIQHPLRLMC
AANKTTTTNEQVPSSLISKDCANLILSSFVEEILVPKYTKPIQLFVIPCLANSVEFPFPH
LLQYLSDKIAEKCTNQTVVGSLEQNTDYSISSSVSSVSIARENSKAIDDVFCSSYVFHSF
MTLDQLHLHRIKNNAIWARNYINVLGHLSENIRKLQPRSSQSLFKQYDTEFDADDDIDSD
EEEDRKIESISMEERDCLLEAITFLNDQNHVEIILDNIDNCLDDVQVLYSLCKICHNLML
YHRTAVFEFRLLFQLTFRPQFIRALWYTLHTQQNSAGFSSPLSLITKGIQIADHEIDRVI
PMIASFCALFGRLIATLHDREFCQEDVLPGAISKIMPFKLNEIISMSSFLKDMSLGLVEL
AFPETRTSINDHYRTALQMNQGSSAPNATSPSKWPHLLKVCVSLLRQLHTRDLRRGFCPP
NHWVVHTLNLPLDKPTDLEMPRGNRHAPRPFQPIRDFTREDFDSNGPPLSTKQVRSITIL
REIPFVVPFNTRVGIFQGLLAADRLRAQGDQQSFLQGPSIQLVVRRSHLYEDAFDKLRQE
NEPDLRARFRVQMINNIGLEEVGIDGGGVFREFLSELIKTAFDPNRGFFMITTDNKLYPN
PSVAKIVPDYQKHYYFIGRMLGKALYENLLVELPLAEFFLSKLAGKHSDVDVHQLDDLDP
VLHRNLLSLKAYEGDVEELGLDFTVVINELGETKVHELKPNGTNIQVTSANRIEYISLMA
DYKLNRQIRQQCAAFRKGLANVVTIEWLYMFSNKEFQVLISGAEIPVDIDDLRENTKYGG
DFEFEHPTIKLFWEVLTNFSDIQKRQLLKFVTSCSRPPLLGFKDLDPPFTIHHAGNTDRL
PSASTCMNLLKLPAFNSKEQMREKLLYAIESNSGFELS
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgaaggcaactataaacgaacgccgtcgcaaaatttaagcggcgcatca
cacacaaatgatcgcgaaacgctgatacgtcgtgctcagcacgaacgacaaaaacgggct
gaaattcgaaagcagcataccggagcaattacaattcaatcgtgcgttcgaagcttctta
tcgcgtgtcaaatgcaaaaaagatgcacaacaaattttcgatcaatacttgaaaacggtt
ggactcaccaatcccgaacagctagaatatttgctcaggtgtattttatttttctacgat
aataaaaacgaaaaagatggcgaacgactgataatattatgtcaatttctaattcgacat
cccgataatttgctgcaaaaatcgattaccgatccgcaatggcaacatcgagtgaagaaa
ttactatcgttatgcatccaacaattgtcactacaaaatttatctcatggaattccattt
cgaactttggaaacattttcatcggacgacatagtttcgaaatatataaccgatgcaaat
gtacgacgaacatacttagaaagtgtatatcgttatttggtacagcgaaaatacttcaaa
ttggtgcgtcaattactcgaagaaaaaataccaccgctgtatgatgtggttctgtcgccg
ccaaattcgatatcggaaactttgctgcaaatgattcagcatccgttgagactcatgtgt
gcagcaaataaaaccacaacaacgaatgaacaagtaccatcatcgttgattagcaaagat
tgtgcaaatctcattttgtcttcgtttgtcgaagagattctcgttcctaagtatacgaaa
ccaattcaactctttgttataccatgtttggcgaacagtgttgaatttccatttccacat
ttgcttcaatatcttagcgataaaatagcggagaaatgcacgaatcaaacggttgtcgga
tcgcttgaacaaaatacggactattccatttcaagtagcgtttcctcagtttcaatagcc
cgtgaaaattcaaaagctatcgatgatgtattttgttcatcatacgtatttcattcgttt
atgacactggatcaattacatttgcatcgcatcaaaaataatgcaatttgggcgcggaac
tacatcaatgttttgggacatttgtcggaaaatatacgtaaactacaaccgcgctcatcg
caatcactatttaaacaatatgatacggaatttgatgcggatgatgatattgacagtgac
gaagaagaagatcgaaaaattgaatcgatttcaatggaggaacgagattgcttgctggaa
gcaattacatttttaaacgatcaaaatcatgttgaaattatacttgacaatatagacaat
tgtttggatgatgttcaagtattgtactcattatgtaagatttgtcataacctcatgctt
tatcatcgaaccgctgtgtttgaattcaggttgctatttcagttaacatttagaccacaa
tttatacgcgctttgtggtatactttgcatacgcaacaaaatagtgccggattttcatcg
cctttaagtttgatcacaaagggaattcaaatagctgaccatgaaatcgatcgtgtgatt
ccaatgattgcatcattttgtgcactattcggacgattaatagcgactttacatgatcgc
gaattttgtcaagaagatgttttacccggtgcaattagtaaaataatgccattcaaattg
aacgaaatcatttcaatgagttcatttttgaaggatatgtcattgggcttagttgaattg
gcattccctgaaacacgaacgagcattaatgatcattatagaacggcattacaaatgaat
cagggttcaagcgcaccgaatgcaacgtcacctagcaaatggccgcatttattaaaagta
tgcgtatcgttattacgtcaattgcatacacgagatttgcgtagaggtttttgtccacca
aatcattgggttgtgcatacattaaatctacctctggataaaccaaccgatttagaaatg
ccacgcggtaatcggcatgctccaagaccattccaaccgattcgtgatttcacccgcgaa
gattttgatagtaacggtccaccgttgtccacgaaacaagttcgatccataacaatctta
agagaaattccattcgttgtgccattcaatacaagagttggcatttttcaaggccttttg
gcggccgatcgcttgcgagctcaaggtgatcaacagagctttcttcaaggtccttcaatt
caactggttgttagacgatcacatttatatgaagatgcgtttgacaaattgcgacaggaa
aatgaaccagatttgcgagcaagatttcgtgtacaaatgataaacaatattggtctagaa
gaggttggcatagacggtggtggtgtgtttcgggaatttttatcggaacttattaaaacg
gcttttgatccgaatcggggatttttcatgattacaacggacaataaactttatccaaat
ccaagtgttgcaaaaattgttcccgactatcaaaagcattattatttcattggtcgaatg
ttaggcaaagcgttgtatgaaaatctattagttgaattaccattggccgaatttttccta
tcaaaattggctggaaaacactcagacgttgatgtacatcagttagatgatctggatccg
gtgttgcaccgtaatttattatcactgaaagcgtatgaaggcgatgttgaagaattgggc
ttagatttcaccgttgttataaacgaattaggtgaaacaaaagtgcacgaactcaaacca
aatggaacaaatattcaagtgactagtgccaatcgtattgaatacattagtttgatggcc
gattacaaattgaatcgacaaattcgacagcaatgtgctgcattcagaaaaggattagcc
aatgtggttaccattgaatggctgtatatgtttagcaataaagaattccaagtgttgatt
tctggcgccgaaatacctgttgacattgatgatcttcgtgaaaataccaaatatggtggc
gattttgaatttgaacatcctactatcaaactattttgggaagttttaaccaatttcagc
gatattcaaaagcggcaactgctcaaatttgtcacatcctgctctcggccaccgttactt
ggatttaaggaccttgatccaccattcacaattcatcatgctggtaatacggaccgttta
cctagtgccagcacttgtatgaatcttttgaagttgcccgccttcaattcgaaagaacaa
atgcgagaaaaacttttatatgccatcgaaagcaattcaggctttgaacttagttag
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integrated database retrieval system
