Contarinia nasturtii (swede midge): 116345094
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Entry
116345094 CDS
T08003
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116345094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cns03009
]
116345094
03016 Transfer RNA biogenesis [BR:
cns03016
]
116345094
03029 Mitochondrial biogenesis [BR:
cns03029
]
116345094
Enzymes [BR:
cns01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
116345094
Ribosome biogenesis [BR:
cns03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
116345094
Transfer RNA biogenesis [BR:
cns03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
116345094
Mitochondrial biogenesis [BR:
cns03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
116345094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
116345094
NCBI-ProteinID:
XP_031630008
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MDGSELKKGNLPKIVEKFEYDAAVGGNTRVENEITTFNHCHQRINEIKSLTSAIANPNST
KLVFQKLPKHMRRRAMSHHPNRLPRKYRLAHRAQMSKSGAPAQTKRPSRKYRRKPSNILA
AYQRRQRANIWLETHIWHAKRFHMVSKWGYKLAESSCDKTFRSSYRATMKHCLIQDISYV
GNIEIRGPLDVLRNKFERMRGRTPDLGLCAKAYVGGQREGTIELFSIDAYPYGALGRFQF
IWKRENDNDALRTLWLFAHPSVYQKLVDELCELFELELQDDLENGVKKHMNNTINAELYE
MRHQLNRFRLTGPLSHAVLTAAFKPKITSTSEEKTWFVDYLMEEKNRKIHQTQTKHWNDL
KHIKSAIDLPPGMILGLNIEDPRINRPKKRTKALPLIDSPMDDGADVCCTIPEFNGDSVL
WERNKCERIQNEKVSTHEICVQRNKNILVPGERCAFENKLQAVPVLLIQRPGSKDPKNLG
YGNGYDVIVPPGYGISTWMCLIMWGAKPGALREMETVAREALEDEFLPDTTSSIVNSNLM
ANELRKKYFRSPPNKRQNYLKLSIASPFKCPWMQLIQEWCNTSSPTEPKYYVLRDKNKLN
KINQFLLGKERNLTDIDENCLIPVSLAMNGRGNAKKFSIICLPKKQDIRNNEKNRNEFIN
RPVLSEPVAIDVNETQRKLLRLNHLKMLKRLRRRRVRVKRKQQEFVDRKVIIAPSHTTKQ
TKLQYDRMCELWLPSAPKAIRKQCTRDVFGYLTQCQFMFHEAKVSGVGYVTVNGIRELAK
LGVNQKRKLNQVLVRDPNSSIYRFATLSIRYH
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggatgggagtgaattgaaaaaaggaaatttaccaaaaattgttgagaaattcgagtat
gatgcagcagttggcggtaatacacgagtagaaaatgaaataacaactttcaatcattgt
catcaacggattaacgaaataaagagcctaacatcagccattgccaatccgaatagtaca
aaattggtcttccaaaaattgccaaaacatatgcgtcgacgagcaatgtcacatcacccg
aatcgtttaccacgaaaatatcgattggcacatcgtgcacagatgagcaaaagcggtgca
ccggcccagacaaaacgtccatcacgaaaatatcgacgcaaaccatcgaatattttggca
gcatatcaacgacggcaaagggcaaatatttggctagaaacgcacatttggcatgccaaa
cgttttcatatggtatcaaaatggggttacaaactagccgaatcatcttgtgataaaaca
tttcgatcatcatatcgggcaacaatgaaacattgtctcatccaagacatttcgtatgtt
ggcaacatcgaaatacgtgggccattagatgtgctacgaaataaatttgaacgtatgcgt
ggccgaacaccggacttgggtctatgtgcaaaagcttatgttggcggtcaacgtgaagga
acgattgaattattttccattgatgcatatccatacggtgcattgggtcgatttcaattc
atttggaaacgtgaaaatgacaatgatgcactgcgtacgttgtggctatttgcacatcca
tcggtatatcaaaaattagtcgatgaactttgtgaactgtttgaattagagctgcaagat
gaccttgaaaatggtgtaaagaaacacatgaataatacaatcaatgcggaactgtacgaa
atgaggcatcaattgaatcgctttcgcttaactggaccattgtctcatgctgttttaaca
gcagcgtttaagccaaaaattacatccacatcggaggagaaaacatggtttgtcgattat
ttgatggaagagaaaaatcgtaagattcaccaaacacaaacgaaacactggaatgattta
aaacatattaaatctgcaattgatttaccacccggaatgatacttggtctgaatattgaa
gacccacgcataaatcgtccaaagaaaagaaccaaagcacttccacttattgattcgcca
atggatgatggtgccgacgtttgttgtacaataccagaattcaatggagacagtgtatta
tgggagcgcaataaatgtgaacgtattcaaaatgagaaagtttcaacacatgaaatttgc
gttcaacgaaataaaaatattcttgtaccgggtgaacgatgtgcttttgagaataaatta
caagcggtgcctgtacttttaatacaacgacccggttccaaggatccaaagaatcttggc
tatggcaatggctacgatgtgattgtaccacctggttatggcatttccacatggatgtgt
ttaataatgtggggtgcaaaacccggtgcactacgtgaaatggaaaccgtagctcgcgaa
gcattagaggatgaatttttgcccgacaccacatcgtctatagttaattcaaatttaatg
gcgaatgaactacgtaaaaaatattttcgtagtccaccgaataaacgtcaaaattacctg
aaactctcaatagctagcccgttcaaatgtccatggatgcaattaatacaagaatggtgc
aatacttcatcgccaaccgaacccaaatactatgtattgcgtgacaaaaacaagttgaac
aaaatcaatcaatttttacttggaaaagaacgaaatctgaccgatatcgatgaaaattgt
ttgattccagtttcacttgcgatgaatggtcgtggtaatgcgaaaaaattctctattatt
tgtttaccaaagaaacaggatattcgaaacaatgaaaaaaatcgaaatgaatttataaat
cgaccagtactgtctgaaccggtggccattgacgtaaatgaaacccaacggaaactctta
cgattgaatcatttaaaaatgctaaaacgtttgcgacgtcgacgagttcgtgttaaacgc
aaacaacaggagtttgtagatcgtaaagtaattattgcgccgtcacatacaacaaagcaa
acaaaattacaatacgatcgaatgtgtgaactatggttaccatcagcgcctaaagcgatt
cgtaaacaatgcacacgtgacgtctttggctatttgacacaatgtcaatttatgttccat
gaagcaaaagtatcaggtgtgggctatgttacggtaaatggcattcgcgaattggccaag
ttaggtgtgaatcagaaacgaaaattaaatcaagtattagttcgagatccgaatagctca
atttatcgctttgcaacactatccattcgttatcactga
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