Contarinia nasturtii (swede midge): 116345104
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Entry
116345104 CDS
T08003
Name
(RefSeq) F-box/LRR-repeat protein 16 isoform X1
KO
K10282
F-box and leucine-rich repeat protein 16
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cns04121
]
116345104
Ubiquitin system [BR:
cns04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
116345104
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box
F-box-like
LRR_8
Motif
Other DBs
NCBI-GeneID:
116345104
NCBI-ProteinID:
XP_031630023
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MFIARNISQGVVERASVELAKRINGLRSKHHHGHAKTSVMERVTNALCGGSSHNNASIGA
PEKPSRIASAKQIVTGKLITSSGSNSQQGTPQSIRKLQTSTTQNVNAMNNMGGSGVSNDC
ISGTQKKLNAADLNSWNWITKSNINTMEQLLQDERFLNKFFQYFTPYERRTLAQVCTRWR
DTLYRSPKFWSGILPTLQCRELRIMSNQDRVKLYNSLVRRGFHAICLLGATDEDAIDIVH
SFPLASKHIHSLSLRCASVSDRGLEALLDHLQSLFELELAGCNEVTEAGLWSCLTPRIVS
LSLADCINIADEAVGAVAQLLPSLYEFSLQAYHVTDAALGYFSPKQSHNLSILRLQSCWE
LTNHGIVNIVHSLPHLTVLSLSGCSKVTDDGIELIAENLQKLRALDLSWCPRITDASLEY
IACDLNQLEELTLDRCVHITDIGVGYISTMLSLTALFLRWCSQVRDFGLQHLCSMRNLQI
LSLAGCPLLTSSGLSSIIQLRHLQELELTNCPGASQELFEYLREHLPRCLIIE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcgcacgcaatatttcccaaggtgttgttgagcgtgcttcggtcgaacttgcg
aaacgcatcaacggcctacgttcaaaacatcatcacggacacgccaaaacaagcgttatg
gaacgtgtaacaaatgcattgtgtggtggaagtagtcataataatgcatcaattggtgca
cccgagaaaccgtccagaatagcatcggcaaagcaaattgttactggtaaattaatcaca
tcatccggcagcaatagtcaacaaggaacaccacaatccattcgaaaactgcaaacgtca
accacacaaaatgtgaatgcaatgaataatatgggcggcagcggtgttagcaatgattgc
attagtggaacacagaaaaagctcaatgctgccgatttaaatagttggaattggatcaca
aaatcaaatataaacacgatggaacaattgctgcaagacgaacgttttcttaataaattt
tttcagtatttcacaccatatgaacggcgtacattagctcaggtttgcacacgttggcgt
gacacactctatcgtagtccaaaattttggtcaggcattttaccaacgttacagtgtcgc
gaacttcgaattatgtcaaatcaagatcgtgttaaattgtataattctctggtacggaga
ggatttcatgcaatctgtttacttggcgcaaccgacgaagatgccatcgatattgtacat
tcatttccattagcctcaaaacatattcattcgcttagtttgcgatgtgcatcggttagc
gatcgaggattggaagctttacttgatcatttgcaatcattatttgagcttgagcttgcc
ggatgcaatgaagtaactgaagctggtctatggtcttgcttaacacctaggattgtttca
ttatcgttggcggattgtataaacattgctgatgaagctgttggtgctgtagcacaacta
ttgccttctttatacgaattttctttacaagcttatcacgtcaccgatgccgcattaggt
tacttttctccaaaacaaagtcataatttaagtatattgcgcttacaatcctgctgggag
ctaacaaatcacggcattgtaaatatagttcattcgctaccccatttaaccgtcctgtca
ttgtccggatgtagtaaagtcacggacgatggcatcgaattgatagctgaaaatttacaa
aaattgcgtgcattagatttatcgtggtgcccaagaattacagatgcatcacttgaatat
attgcctgcgaccttaatcagttagaagaactcacgttagatcgatgtgtgcatataacg
gatattggtgtcggctatatatcaacaatgttatcattgacagcattgtttttgcgttgg
tgttcacaagtacgtgactttgggttacaacatctttgctcgatgcgaaatttgcagata
ctatctctagcaggttgccctttattgacgtcaagcggactatccagcattattcaacta
cgtcatttacaggagctagagcttaccaattgtcccggtgcgtcgcaagaactttttgaa
tatttgcgtgaacatttgccacgttgtttgattatcgaataa
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