Contarinia nasturtii (swede midge): 116345153
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Entry
116345153 CDS
T08003
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116345153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116345153
Spliceosome [BR:
cns03041
]
Complex A
U1 snRNP components
U1 related factors
116345153
Complex B
116345153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
116345153
NCBI-ProteinID:
XP_031630135
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MSSFRGKPVAQSSIPYMSSATMLPPPNASTLPSMNQPPPSHANAYRSGPQLYARPTPLET
TTTNATQQPYNTLPNTIPSATSGSTAAGGVTGTTETAGPVITVFVGNISERAPEHMIKKI
LATVGAVINWKRVSTFGFCEYDGPTAGLRAVRILHDLDVAGKKLVAKVDAKNKLLLDNYK
EEEGARNIGNEDASEAHEKKEDADVFEAIKQILSDHRSEIENYEAIQEQKSNKMLQSASI
EEDKRDLINREIGKFRKTAEADEQKKEKEKDRRKREEKERDRDRDRARGSLSPRKDKDKK
ASRRRSRSRERSKEREREKERERERERERERERERERERERERERERERERERIERERER
EEKVQKAPRDLQREKEMEEELRERKKAEKKAREKEAAYQERLRNWEIRERRRAKEYEREK
EKELEKEEEREKEAKRLKEFLEDYEDERDDPKYYKGQELKRRLYERVKEAEQDTKDRNKE
QEELEELKNKIFSGEYDNPTQEFERLKKQREELYKPKLLIDVNLEQSQQREREIQRERER
DAERQSLKDRERAQKERYVMAQASRELASLNAEPIDSTDSSNDDNSPLNNNSRGSESRDT
HFNSNSNGMPNDEDSRSSMRSIKSLNSPASIETPPLIAPAISLNLNANAKKKRLEVKDIF
NNDEDNEDINGPKRRKLVPLDYEDNINSKGQKSSSSNTNSDGGGAGQAATASATNNNSSS
KRKDGRNDENSNRKEENVRSQEEKRRHIKSIIDKIPTGKSDLFNYKLDWNEIDNTLMEKK
IRPWINKKIIEYIGEPEPTLVDFICSKVLAGSTPQGILDDVQMVLDEEAEVFVVKMWRLL
IYEVEAKKDGLGK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgtttagagggaaacctgtagcacaatcgagcattccatatatgtcgtcggca
acaatgctaccaccaccgaatgcatcaacgttgccgtcaatgaatcaaccgccaccatca
catgcgaatgcataccgatcgggacctcagctatatgctcgaccaacaccattggaaaca
acgacaacaaatgcaacacagcaaccgtacaatacattgccgaacacaataccgtcggca
acctcagggtcaacggcagctggtggtgtgactgggaccactgaaaccgccggtcccgtt
atcacggtttttgttggtaatattagcgaacgtgcacctgaacacatgattaaaaagata
ttggcaacggttggtgcggttatcaattggaaacgtgtctcaacatttggcttctgcgaa
tatgacggtccaacggctggattacgtgcggtgcgtatattgcatgacttagatgtggcc
ggtaaaaaattggttgccaaagttgatgcaaaaaataaactacttttggataattacaaa
gaggaagaaggtgctagaaatattggcaatgaagatgctagtgaagcccatgaaaagaaa
gaagatgccgatgtttttgaagcaataaaacaaattctgtccgatcatcgttcggaaata
gaaaattatgaagcaattcaagagcaaaaatccaataaaatgttacaaagcgcaagtatc
gaagaggataaacgtgatttaatcaatagggaaattggtaaatttcgaaaaacagccgaa
gctgatgaacagaagaaggaaaaggaaaaagatcgacgaaaacgtgaagaaaaggaacga
gatagagatcgagatcgtgccagaggttcattgtcaccgcgcaaagataaagataaaaaa
gcatcacggcgtcgaagcaggtctagagaacgttcaaaggaacgtgaacgtgagaaagag
cgcgaaagagagcgtgaaagagaacgagagagagaacgtgaaagagagcgtgaaagagaa
cgtgagagagaacgtgaacgggaaagagaaagagaacgaattgaacgtgaaagagaacgc
gaagaaaaggttcagaaggctccacgtgatttacaacgcgaaaaagaaatggaagaagag
ttgcgcgaacgaaagaaggcggagaaaaaagcccgcgaaaaagaggcagcttatcaagag
cgattgcgaaattgggagattcgtgaacgacgtcgggccaaggaatatgaacgagaaaaa
gagaaagaacttgagaaagaggaagaaagagaaaaagaagcaaaaagattgaaggaattc
cttgaagactatgaagatgaacgagatgatccaaaatattacaaagggcaggaattaaaa
cggcgtctgtacgaacgtgttaaggaagcagaacaagacactaaagacagaaataaagag
caagaagaattagaagaattgaaaaataaaatattcagtggtgaatacgataatccaacg
caagaatttgaacgtttaaagaaacaacgcgaagaattgtacaaaccgaaattattaatt
gatgtaaatttggagcaatcacagcaacgtgaacgagaaattcagcgcgaacgtgaacgt
gatgctgaacgacaaagtctcaaggatcgcgaacgtgcacaaaaagagcgatatgttatg
gcacaggcatcaagagagcttgcatcgctcaatgccgaaccaattgactcaaccgactcg
agcaacgatgataattcaccgctaaataacaatagtcgaggctctgaatctagggacacg
catttcaattcaaatagcaatggcatgccaaatgatgaagattcacgatcttcaatgcgg
tccatcaaatcgttaaatagtccggcaagtattgaaacaccaccattgattgcgccagcc
attagtttaaatttgaatgcaaatgcaaagaaaaagcgattagaagtcaaggatattttt
aataatgatgaagataacgaagatattaacggaccaaaacgacgaaagttagttccatta
gattatgaggacaatataaattcaaaagggcaaaaatcatcaagtagtaatacaaattcg
gatggtggtggtgctggtcaagccgcaactgcatcagcaacaaacaataattcatcgtct
aaacgaaaagatggtcgtaacgatgagaatagcaatcgaaaggaagaaaatgtacgaagc
caagaggagaaacgacgacacattaaaagtattatcgataaaattccaaccggcaaatcg
gatttgttcaattacaaattggattggaatgaaattgataacacgctgatggaaaaaaaa
attcgaccgtggatcaataaaaagatcatcgaatatatcggcgaaccagagccaacgcta
gtcgatttcatttgctcaaaagtgttagccggcagcacaccacagggtatactagacgat
gttcaaatggtattggacgaagaagctgaagtatttgtggtaaaaatgtggcgacttcta
atttatgaagtcgaagcgaaaaaagatggcttaggaaaataa
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