Contarinia nasturtii (swede midge): 116345178
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Entry
116345178 CDS
T08003
Name
(RefSeq) synaptobrevin isoform X1
KO
K13504
vesicle-associated membrane protein 2
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116345178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116345178
Membrane trafficking [BR:
cns04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
116345178
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
116345178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
MCU
SNARE
PRIMA1
Seryl_tRNA_N
DUF5345
SPC12
Motif
Other DBs
NCBI-GeneID:
116345178
NCBI-ProteinID:
XP_031630203
LinkDB
All DBs
Position
Unknown
AA seq
129 aa
AA seq
DB search
MSKPSGSNETNIPTLPPPPNSSTIGGQNPSQKRLQQTQAQVDEVVGIMRVNVEKVLERDQ
KLTELDQRADALQHGASQFEQQAGKLKRKQWWANMKMMIIMGCIGVVLIIIIVVSLWPSS
SEAIQKDSN
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaccctctggatcaaatgaaacgaatattcctacattgccaccgccacccaat
agcagcacgattggcggccaaaatccatcgcaaaaacgattgcaacagacacaggctcag
gtcgacgaggtggttggcataatgcgtgttaatgtggaaaaagtattggaacgtgaccaa
aaattaacggaactggatcaacgagctgacgccttacaacacggtgcatcgcaattcgaa
cagcaagctggcaaattgaaacgaaaacaatggtgggcgaacatgaaaatgatgattatc
atgggttgcattggtgttgttctcatcatcattatagttgtatcgttatggccgtcgtca
tccgaagctattcaaaaagatagtaattaa
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