Contarinia nasturtii (swede midge): 116345206
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Entry
116345206 CDS
T08003
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116345206
Transcription factors [BR:
cns03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116345206
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Zip
Motif
Other DBs
NCBI-GeneID:
116345206
NCBI-ProteinID:
XP_031630252
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
MSQILMKNQSDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTECQKR
PFIDEAKRLRALHMKEHPDYKYRPRRKPKTLVKTQIPSNHQKHLHSHHHLSSGSKDSQSH
QQQTHPQHQSTAQVQHLSPKYPFTSSLELTLGIPHRTSTFPLSSHYQLPATPLDTTLALD
LQARLQQMYGSLYPPWRYFSGCPSAATAAAAAAMVPSDSQSSLSPVGYCVKSTKRSPSPV
TATNSLPSVI
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaatattaatgaaaaatcaaagtgatcacataaaacgtccaatgaatgcattt
atggtgtggtcacgcggtcaaagacgaaagatggcccaagacaatccaaaaatgcacaat
tcggaaatatcgaaacgacttggtgccgaatggaaattgcttaccgaatgccaaaaacgt
ccattcatcgatgaagcaaaacgattgagagcgcttcatatgaaagagcatccggactat
aaatatcggccgcgtcgaaagccaaaaactcttgtaaaaacacaaataccgtcaaatcat
caaaagcatctgcattctcatcatcatttgagcagcggtagcaaagattcacaatcccat
caacagcaaacacatccacagcatcagtcaacggctcaagtgcaacatttatcaccaaaa
tatccattcacctcatcattagaattaacacttggcattccacatcgtacatcgacattt
ccattgagtagccattatcaactgcccgccacaccgttggatacaacgcttgccctcgat
ttgcaggcacgtcttcaacaaatgtacggttcattgtatccaccatggcgatatttcagc
ggttgtccatcggcagcaacagctgctgcggctgctgcaatggtgcccagtgacagtcaa
tcatcactatcgcccgttggatattgtgttaaatcaacaaaacgtagcccatcacctgta
accgcgacaaattcacttccaagtgttatatga
DBGET
integrated database retrieval system
