Contarinia nasturtii (swede midge): 116345210
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Entry
116345210 CDS
T08003
Name
(RefSeq) huntingtin-interacting protein 1 isoform X1
KO
K04559
huntingtin interacting protein 1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cns04131
]
116345210
Membrane trafficking [BR:
cns04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
116345210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANTH
I_LWEQ
DUF7491
DUF285
HWE_HK
tRNA_lig_kinase
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-GeneID:
116345210
NCBI-ProteinID:
XP_031630262
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MSSISLTRILQTKKSNGEADKELFDKQMTVSISKALSGTEMPLKVKHARVAIIGTFHSRG
AHSFWAVALRQPLQENRITAWKFCYLLHKVLREGHPLSCQHSMRHRGMLTELGKLWGHLN
DGYGVCIRHYTKLLVNKLEFHDRNPRIPPNLTMKRGELDVIGGGDINFYFQMAVEMFDYL
DDIIALEAAIFSSITTFHVNSMTSAGQCRLSPLIPLIQDSSQLYDFLVRIMFKLHSNLPN
DVLAGHRDRFRTIFTQLKSFYNQSRNLQYFVNLITVPKLPENAPNFSSQVDFGAYTPPVV
VIPEPEPEPLVDMSMPTLSLPSHDDSPQDPPTPTVNFEQLIRERDELILHLQTEVDRLGK
NLKAAALHKRDEHAQYEETIASLNSELSDAHEQLTNMRFVKEELELKAQSVEKTQVEEEK
LKASEEKFQKLKVMYAQIRDEHVKLLRQHGDVSKQLAGQTKVASDATKERDDLRIQLEET
LYKQSKLEESVQQSSNDVKSANDDLQRRIIQLENENSALSAKYDDLNANKSAEVAELRVL
LDQYESELKSLKSWSSTISTEKEELDEKHKNIITDNAMLLAKIQELQNSVPELEVKCDNL
AEKEQQLREAIEELEGAKAELITKQNELVKERDNLLTRCEEFTQTIYEYDVEKITMAGKM
EEMQNKLELINLQSNRMQNVKDTIECDLHDLLLEQDEYNEKLSQTNNTIHTLEEALKNSR
ISGDARIRALVETCIKSSEKMVTRAAAETDVAVAAGTSAYFMLFSEELMELLNELSMAHS
NYVSDSYKNVEALARKSILMGHLMATVYIQGNNICKTSANIELGERIMDEIKKWNSTSLE
LFSSLMSTHESKEVQNRIDEVKKRLEQISTMIHELSKQSESGEDIGEIIERELSGMDKAI
EEAASRIEEMLSKSKASDSGIKLEVNEKILDACTALMKAIRELVKKSRILQAEIVGLGKG
TASATEFYKRNHQWTEGLISAAKNVAQGANFLVTAANKAVSGEAKNHLDLIVVAQEIAAS
TAQLVIASRVKAPKESQNLVALAMSSRDVTQATGAVVATAKDCGQRLEESQDLDLTKLTV
HQAKTLEMEIQVKVLELEQALQVERSRLASFRRKNYHN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctatatcattgacacgaattttgcaaacgaaaaagtccaatggcgaagcggac
aaagagttatttgacaaacagatgacagtgagcatcagtaaagcgttaagcggcactgag
atgccattaaaagtgaaacatgcaagagttgcgattattggtacatttcacagtcgtgga
gcacattcattttgggctgtcgctttgcgccaaccgttgcaggaaaatagaataacagcc
tggaaattttgttatttattacacaaagtattacgtgaaggtcatccgttgtcatgtcaa
cattctatgcgacacagaggcatgttaaccgagcttggaaaattatggggacatttaaat
gacggatatggtgtctgcattcgtcattacaccaagttattagtgaacaaattggagttt
catgaccgaaatccacggattccaccaaatttaacaatgaaacgtggcgaattggatgtt
ataggtggtggcgacattaatttttactttcaaatggccgtagaaatgtttgactacttg
gatgacataattgcattagaggcagcaattttcagttccattacaacattccatgtgaat
tcaatgacatcggctggtcaatgtcggctgtcaccactaattcccctaattcaggactca
agccaactgtatgatttcttagttagaatcatgtttaaattgcactcaaacctaccgaat
gatgtgctagcaggtcatcgtgatcgatttcggaccatattcacgcagctcaaatcattt
tacaatcaatcacgtaatctgcagtattttgttaatttaataacggttccaaagctgccg
gaaaatgcgccgaacttttcttcgcaagtggattttggagcatatacaccaccagttgta
gttattcctgaaccggaaccagagcctctagttgacatgagtatgcccacattatcgcta
ccatcacatgatgattcgccacaagatccacctacgcctactgttaactttgaacaattg
attcgtgaacgggatgaattgattctacatttacaaaccgaagtcgatcgattgggaaaa
aatctaaaagcggccgcacttcataaacgagatgagcatgcgcaatatgaagaaacgatt
gcatctttaaattcagaactgagcgatgcccatgaacaattgaccaatatgagatttgtt
aaggaagaactagagttgaaggctcaatcggtggaaaaaactcaagtcgaggaagaaaaa
ctaaaggccagcgaagaaaaattccaaaaactaaaagtaatgtatgctcaaattcgtgat
gaacacgtgaaattgttacgacaacatggtgatgtaagcaaacaattggcgggacaaaca
aaagttgctagcgatgcaacgaaagaacgtgacgacttaagaattcaactagaagaaaca
ctttacaagcaaagcaaattggaggaaagtgttcagcaaagttcaaatgatgtcaaaagc
gcaaatgatgacttacagcgtcgcataatacagttggaaaatgaaaattcagccttatct
gccaaatatgatgatttaaatgcgaacaagtctgctgaagttgccgaactacgcgtctta
ttggatcaatatgaaagtgaattaaaatcactgaaatcttggtccagcacaatcagcacg
gaaaaagaagaattagatgaaaagcataaaaatatcatcacggacaatgcaatgttacta
gccaaaattcaagagctgcaaaattcagtgcccgaacttgaggtaaaatgcgacaattta
gctgaaaaagaacaacaacttcgtgaggcgatcgaagaattagaaggtgcaaaagcggaa
ttgatcacaaaacaaaatgaattggtgaaggaacgtgataatttattgacacgttgtgaa
gaatttactcaaacaatctatgaatatgatgttgagaaaatcacaatggccggaaaaatg
gaagaaatgcaaaataaacttgagttaataaatttacaatcaaatcgcatgcaaaatgta
aaagatacaattgaatgtgatttgcatgatttacttcttgaacaggatgaatataatgaa
aaattatcgcaaaccaacaacaccattcatacgttggaagaagcattaaaaaattcacga
atcagtggcgatgcacgcattcgagctctggttgagacatgcatcaaatcatcagagaaa
atggtgacacgagctgcagctgaaactgatgttgccgttgcagctggaacatcggcttat
tttatgctttttagcgaagaactgatggaacttctcaatgaattatcaatggctcattcc
aactacgtatctgatagttataaaaatgtcgaggcacttgcacgtaaatccattttaatg
ggtcatttaatggctacggtttacattcaaggcaataacatctgcaagacatcagccaac
attgaacttggcgagagaatcatggatgagattaaaaaatggaattcaacatcgttggaa
ctattctcttcattgatgtcgacacacgaatcaaaagaagtgcaaaatcgcattgatgag
gtaaagaaacgattagaacaaatctcaacaatgatccacgaattaagtaaacagtctgag
agcggtgaagatattggcgaaattattgagcgcgaacttagtgggatggacaaagctatc
gaagaagctgcttcaagaattgaggaaatgttatcaaaatcaaaagcttcggattcgggt
ataaaattggaggtaaatgagaaaatactcgacgcctgcactgcacttatgaaggcaatt
cgagaactggtgaaaaaatcgcgcatacttcaagctgaaattgttggattgggcaaggga
acagcatcagcaaccgaattctataaacgtaatcatcaatggacggaaggattaatatca
gctgcaaaaaatgttgctcaaggtgctaatttcttggtgacggctgccaataaagctgtc
agcggagaggcaaaaaatcatttagacttaatagttgtggctcaagaaatagcggcatca
acggcacagttagtaattgcaagccgagtaaaggcgccaaaggaaagtcaaaatttggta
gcgcttgcgatgtcatcgcgtgatgtaacccaagcaactggtgcggttgttgccacagcc
aaagattgtggccaacgtttggaagaatcacaagatcttgatctaaccaaattaacggtg
catcaagcaaaaacgcttgaaatggaaattcaagtaaaagttttagaattggaacaagcc
ctgcaagtagaacgctctcgtctggcttcattccgccgaaaaaattatcataattga
DBGET
integrated database retrieval system
