Contarinia nasturtii (swede midge): 116345258 Help Entry 116345258         CDS       T08003                                  Name (RefSeq) protein CASC3 isoform X1   KO K14323   protein CASC3 Organism cns  Contarinia nasturtii (swede midge) Pathway cns03013   Nucleocytoplasmic transport cns03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:cns00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     116345258    03015 mRNA surveillance pathway     116345258  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cns03019]     116345258 Messenger RNA biogenesis [BR:cns03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      116345258 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Btz Motif Other DBs NCBI-GeneID:  116345258 NCBI-ProteinID:  XP_031630341 LinkDB All DBs Position Unknown AA seq 932 aa AA seqDB search MSTVQPSQSPPQQSPDAKKVGSDGEDFSDTANETVTFELCSDANKTATSSSHQDSEYDTA SDSQSSDEADPLQKSEPAGDSGGGKTVDESLIDLVNAKTGMMHLDDEESRKLSCKENDVH DDADGEADDDEESLTRRGRRGSHSGESEDDDDDDDRSDDDIRSDDESESDNGSIILDLER QRGDGEEEQNEEGKKVDDDEDRSNPQYIPKRGVFYEHDDRTADDPDANSAELEDGADEQP PKPVKKTSDRWAHDYYDESEQAPKSRAELVNSYGYDIRNEDGPPKTRRNRRYNRGPSKYT RKWEDESAYAKQNALPPRNPRPEDFPELGSKVDRRAKSSYQDRQEEKENKLRQNYQNDDD NRIYASRKKIPSRQNDRRDSDRRDISPRSRRQHDRYGPSRGRENDLDDRRKNKDKGYKIH GRSTMEFKNQNRNRSSEYEGRGSGGMHHRNNSGGHSESRNHSHHHDDEHVESISFTNSKL NNNSNRFSNVEYSNVGSMQGREYGINQLGQEQTMQQSQNQQSQSQQRFQLVSNEIPINLE SGNQMPNQQNSQSTLLTTNHSLPISSSVIATTGAAPLNPQAIHGQAINQVQQPPPMGHIQ GAANNSNNLNKGHQKRYSNQRQRTGLEAQTQPPAQTQQLPMNVVIQQQQSQQPPQPPQNP HQTTPHQTPQQNVVPNVSAPTQFQPNYFPNEYPAINQLYVSDIRQQPSGPASGYLPQGAP PQPASVGVVPQMMNFVPAHPPMQPAPVVQPVPNAQVVAQPPQGQYPTYPAYAGVQNYNSA SGITYYAPQTQAPPRPILSQRRHKNAIPIMAPPERSNKNSHGNRSSGSGPNSSNNDSNNN SDQQQGAQSVDNTAENIDHILDNMFVQRPHPYQSGLAESAATVRKDSSSDGPKSQMVDVS GNSETKDDAGNIEQSTGSFGDMNISVAIQANQ NT seq 2799 nt NT seq  +upstreamnt  +downstreamnt atgtcgaccgtacagccgtcacaatcacctccacaacaatcacccgatgcaaaaaaggtc ggttcagatggcgaagatttttcagacacagccaatgagacggttacgtttgagctatgc tctgatgcaaataaaacagcaaccagctcatcacaccaagattctgagtatgacacggcc agtgattcacaatcatcagatgaagctgatcctttgcaaaagtccgaaccagccggagat tctggtggcggtaaaacagttgatgaaagtcttattgatttagtcaatgccaaaaccggc atgatgcatcttgacgatgaagaaagtcgcaaattatcgtgcaaagaaaatgatgtgcat gatgatgccgatggagaggctgatgatgatgaagaaagtttgactcgacgtggcagaaga ggcagccacagtggagaatccgaggatgatgacgatgatgatgatagatccgatgatgat attagaagtgacgatgaaagtgagagtgacaatggaagtattatactagatttggagcgt caacgtggtgatggcgaagaggagcaaaacgaagaaggaaagaaagtggatgacgatgaa gatcgtagcaatcctcaatacatccccaagcgaggtgttttctatgaacacgatgaccga actgccgatgatcccgatgcgaatagcgctgagttggaagatggtgctgatgagcagcca ccgaaaccagtaaaaaagacttcagatcgatgggcgcatgattattatgatgaatcagag caagcgccaaagtcacgtgctgaattggtgaattcatatggctatgatattcgtaatgaa gacggtccaccgaaaactcgacgtaatcgtcgatataaccgtggcccaagcaaatacact cgcaaatgggaagatgaaagtgcatatgccaaacagaatgcattaccaccaagaaatcca cgtcccgaagatttccccgagctgggctcgaaagttgatcgccgtgctaagagcagttat caagatcgtcaagaagagaaagagaataaattacggcagaattatcaaaacgacgacgat aatcgaatttatgcgagtcgaaagaagataccaagccgtcagaatgacaggcgtgatagc gatcgacgcgatatttcaccacggtcgcgtcgccaacatgatcgatacgggccgagtcgt ggcagagaaaatgatttggatgatcgacgaaagaacaaggacaaaggttataaaatccat ggccgaagcacgatggaatttaaaaatcaaaatcgtaacagaagtagcgaatatgaaggt cgcggtagcggtggaatgcatcatcgaaataatagcggtggtcattcggaatctcgtaat cactcacatcatcatgacgatgaacatgttgaatcgattagtttcacaaattcgaaactt aataataattcaaatcgattttctaatgtggaatattcgaatgttggatcgatgcaaggc agagaatatggcatcaatcagttgggacaagagcaaacaatgcaacaatctcagaatcaa cagtcacaatcccagcaacggttccaattagtatccaacgaaataccaattaatctagag tcgggcaatcaaatgcctaaccaacaaaattcccaaagcactttgcttacaacgaaccat tcattgcctatttcatccagcgttattgctacaactggagccgcaccgcttaatccacag gcaatacatggacaagccataaatcaagtacaacaaccaccaccaatgggacacatacaa ggagctgcgaataattcaaataatttaaataaaggtcaccagaaacgctattcaaatcaa cggcaacggactggattagaagcacaaacacaaccaccagctcaaacacaacaactgcca atgaatgtggtaattcaacaacaacagtctcaacaaccaccacaaccgccacaaaatcca catcaaaccacaccacatcagacaccacaacaaaatgttgtaccgaatgtatcggcaccc acacaatttcaaccaaactattttcctaatgaatatccagctattaatcaattgtacgtg tctgacatccgacaacaaccgtcgggtcccgcatctggatacttgccacaaggcgctcca ccacagcctgcatccgttggtgtagtgccacaaatgatgaattttgtgcccgctcatcca cctatgcaaccagctcccgttgtacaacccgttcctaatgctcaagtagttgcccagcca ccgcaagggcaatatccgacgtatccagcatatgctggcgtacagaattataattcagct agcggcataacatattatgcaccacaaacgcaagcaccaccacgaccaatattgtcacag cgacgtcataaaaatgcaattccaatcatggcgccaccagagcgaagcaacaaaaattcg catggcaatcgatcaagcggaagcgggccaaattccagcaataatgacagcaacaacaac agtgaccaacaacagggcgcccagtcagtggataatacagctgaaaatatcgatcacatc ttggacaatatgtttgtgcagagaccgcacccatatcagtctggtttagctgaatcagcg gcaaccgtacgaaaggactcatcaagtgacggtccaaaatcgcaaatggttgatgtcagt gggaattctgaaacaaaagatgatgctggtaatatcgaacaatcgactggttcttttggt gatatgaacatttcagttgcgattcaagcaaatcagtag

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