Contarinia nasturtii (swede midge): 116345310
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Entry
116345310 CDS
T08003
Name
(RefSeq) U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
KO
K12846
U4/U6.U5 tri-snRNP-associated protein 3
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116345310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116345310
Spliceosome [BR:
cns03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
116345310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNRNP27
Motif
Other DBs
NCBI-GeneID:
116345310
NCBI-ProteinID:
XP_031630422
LinkDB
All DBs
Position
Unknown
AA seq
173 aa
AA seq
DB search
MGRSPSPRRRDKNREREFRARKRSRDREVRGERDERDRADRSHRSRSRGRDRSRSRERNE
RDKDRTVPSRSYERDRTKTSRSRRGHGGGSSSGASSSNATVGDRPIVTDADLEGKSAEEQ
EMMKAMGFCGFDSTKGKKVDGNDAGEVHVILKRKYRQYMNRKGGFNRPLDFVA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgatcaccctcacctcgccgccgtgataaaaatcgagaacgtgaattccgggca
cgaaaacggtccagagatcgtgaagtccgcggtgaacgtgatgaacgagacagagctgat
agatcacatcgatcaagaagtcgtgggcgcgacagaagcaggagccgagaacgaaatgaa
cgagacaaagatcgaaccgtgccgtcacggtcatatgaaagagatagaactaaaacgtcc
agatcgagacgcggacatggtggtggcagtagcagtggtgctagtagctcaaatgcaact
gtgggcgatcgacccattgttacggatgctgatctcgagggaaaatctgcggaggaacaa
gaaatgatgaaagcgatgggcttctgcggatttgattcaacaaaagggaaaaaagtcgat
ggaaatgatgctggagaagtgcacgtaattctaaaacgcaagtatcgacaatacatgaat
cgcaaaggtggtttcaatcggccacttgacttcgttgcatag
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