Contarinia nasturtii (swede midge): 116345327
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Entry
116345327 CDS
T08003
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116345327
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GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
YfkD
Motif
Other DBs
NCBI-GeneID:
116345327
NCBI-ProteinID:
XP_031630448
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MVESSGLLMTRNNPMDGMSTGAGTGINSNGAATVMIGATGTTRCGMLETFVRGAWYRVTV
TLESDYLSVSLDETCEPIDQTTTLNGTLGSNHSGNNGSSGSLPSSGIGNGVSSLNSEETS
NSEYLNINNNSADNSSGAEVCDAPYEIANQKRHVRITKVDNSGLGISIKGGRENRMPILI
SKIFQGMAADKAKALYVGDAILSVNGEELRDATHEEAVRALKRAGRVVDLEVKFLQEVTP
YFRKASIISEVGWELSKAFLCPLINPNGSNMLNTSSKSMSPPSAPKSPPRADTRYIPLQL
THLARNLKYHDPENRCIELHSPDGIHSCILRAGDSQEALAWFNALHSAIARSAQRALVDA
NRALSNLIGELKHIGWLSRRVGNEQQNGQSSSESSDDLDRWLAVFVAITDRELRIYESAP
WSMEAWNQPVENSPLASTRLAGTGNNSTVNSSSQNQSTVFCVRCGTPRGIITHWFRSETH
RDMAAWARALVQGSHNAINYQREFSFRCLYQNRPCQLLVNLDRGFSLVDSSLGSPAKTIW
SYTFEKLKSSADDGNRMLFLDFGGDEGEIELDMECCPKPVVFVLHNCLSAKVHSLT
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaatcatctggattattaatgactcgcaataatccaatggacggaatgtcaact
ggtgcgggcactggaatcaattcaaacggagctgcaacggtaatgattggtgcgaccggt
acaacaagatgtggtatgctcgaaacatttgtacggggtgcatggtatcgagtaaccgta
acacttgaatcggactatttatcggttagcttggacgaaacatgtgaaccgatcgatcaa
actaccacattaaacggaacattgggaagcaatcacagtggaaataatggatcaagcggt
tcactaccatcgtcaggtattggaaatggtgtttcatcattaaattccgaagaaactagc
aacagtgaatacttaaatattaataataattcagcagacaatagttccggagctgaagta
tgcgatgcaccttatgaaatagcaaatcaaaaaagacatgtgcgaataaccaaagtggat
aatagtggtttaggaatttctataaagggcggcagagaaaatcgaatgccaattttaata
tcaaaaatatttcaaggaatggctgctgataaagcgaaagcattgtacgtaggcgatgca
atattatcggtaaatggtgaagaattacgtgatgcaacgcacgaagaggccgttcgtgca
ttgaaacgagctggacgggttgtcgatttagaagttaagtttttgcaagaagtgacacca
tattttcggaaagcaagcattatatcggaggttggatgggagttaagtaaagcctttctg
tgtccgttgattaatccaaatggttcaaatatgctgaacacatcatcgaaatcaatgtca
ccaccatcggcaccaaaaagtccgccacgggccgatacacgctacataccattacaactg
acacatttagcacgaaatctcaaatatcatgatccagaaaatcgttgcatcgaacttcat
tcgccggatggaatacattcgtgcattttacgtgctggggattcacaagaggcattggca
tggttcaatgcattgcattcggcaattgcacgtagtgcacagcgagcattagttgatgca
aaccgggctctctccaatcttattggcgaattgaagcatatcggctggttgagtcgtcga
gtcggaaacgaacagcaaaacggtcaatcgagttcggagagttcagatgatttggatcgg
tggttggccgtcttcgttgccatcaccgaccgtgaattgcggatatatgagagtgcgccg
tggtcaatggaagcatggaatcaaccggttgaaaattcaccattagcgtcaacacgattg
gccggaacgggcaacaattcaaccgttaattcaagctcgcaaaatcaatcgacggtattt
tgtgtgcgatgtggtacaccacgtggtataataacacattggtttcgatctgaaacacat
cgtgatatggctgcttgggctcgagcgttggtacaaggcagtcacaatgccatcaactat
caacgagaattttcattcagatgtttatatcagaatcgaccatgtcagttgttggtgaat
ttggatcgtggattttcattggttgatagtagtttgggatcgccagcaaaaacgatttgg
tcatatacatttgagaagctcaaatcatctgctgatgatggcaatcgaatgctgtttttg
gactttggcggtgacgaaggcgaaattgagctcgatatggaatgctgcccaaagccggtt
gtattcgtcttacacaattgtttgtcagctaaagtgcattcgcttacataa
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