Contarinia nasturtii (swede midge): 116345344
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Entry
116345344 CDS
T08003
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116345344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116345344
03019 Messenger RNA biogenesis [BR:
cns03019
]
116345344
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116345344
RNA polymerase I system
116345344
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
116345344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
zf-C4
Motif
Other DBs
NCBI-GeneID:
116345344
NCBI-ProteinID:
XP_031630478
LinkDB
All DBs
Position
Unknown
AA seq
116 aa
AA seq
DB search
MSFDTIPKDLRGLRACLVCSLVKSFDQFEMDGCDNCEEFLRMKNNKDNVYDCTSNNFDGL
IAVMSPEDSWVCKWQRINRFTKGIYAISVSGRLPKTIVRDMKNRGIPYRPRDTSQR
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgatacaattccaaaagatttgcgaggtcttcgtgcgtgtttggtgtgctca
ttggtcaagtcattcgaccaatttgaaatggatggttgcgataattgcgaagaatttttg
cgcatgaaaaacaacaaagacaatgtctatgactgtaccagcaacaattttgatggttta
attgcggtgatgagtcccgaagacagctgggtttgcaaatggcaacgtataaatcggttt
acgaaaggaatttatgcaatttcggtgtcaggccgtttacccaaaaccattgttagagat
atgaaaaacaggggtattccatatcgaccacgagatacgagccaacgataa
DBGET
integrated database retrieval system
